EY728195

Overview
NameEY728195
Unique NameEY728195
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length976
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY728195 vs. ExPASy Swiss-Prot
Match: G3P_CANFA (Glyceraldehyde-3-phosphate dehydrogenase OS=Canis familiaris GN=GAPDH PE=2 SV=3)

HSP 1 Score: 134.035 bits (336), Expect = 1.252e-30
Identity = 68/131 (51.91%), Postives = 87/131 (66.41%), Query Frame = 1
Query:   61 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFV 453
            VK+G+NGFGRIGRLV R       V++VA+NDPFI  +YM YMF+YDS HG++ H  +K ++ K ++ G K +++F  R+P  I W + GAEYVVESTGVFT               VIISAPS DAPMFV
Sbjct:    2 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKF-HGTVKAENGKLVING-KSISIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFV 130          
BLAST of EY728195 vs. ExPASy Swiss-Prot
Match: G3P_SCLSC (Glyceraldehyde-3-phosphate dehydrogenase OS=Sclerotinia sclerotiorum GN=GPD PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.636e-30
Identity = 70/130 (53.85%), Postives = 88/130 (67.69%), Query Frame = 1
Query:   64 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFV 453
            K+GINGFGRIGR+V R  ++ DD+++VAVNDPFI T+Y  YM KYDS HGQ+K  ++KV  D   + G+K V  +  R+P  IPWAE+ A YVVESTGVFT               V+ISAPS DAPM+V
Sbjct:    5 KVGINGFGRIGRIVFRNAIEHDDIDIVAVNDPFIETEYAAYMLKYDSTHGQFK-GDIKVLSDGLEVNGKK-VKFYTERDPANIPWAESEAYYVVESTGVFTTTEKAKAHLKGGAKKVVISAPSADAPMYV 132          
BLAST of EY728195 vs. ExPASy Swiss-Prot
Match: G3P_PICPA (Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia pastoris GN=GPD PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 1.636e-30
Identity = 68/131 (51.91%), Postives = 86/131 (65.65%), Query Frame = 1
Query:   61 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFV 453
            + +GINGFGRIGRLV RV L R D+++VA+NDPFI  +Y  YMFKYDS H  +K  E+    +K  + G K +TVF  R+P  IPW + G +YV+ESTGVFT               V+I+APSKDAPMFV
Sbjct:    3 ITVGINGFGRIGRLVLRVALSRADIKVVAINDPFIAPEYAAYMFKYDSTHKAYK-GEVSASGNKINIDG-KEITVFQERDPVNIPWGKAGVDYVIESTGVFTTLEGAQKHIDAGAKKVVITAPSKDAPMFV 131          
BLAST of EY728195 vs. ExPASy Swiss-Prot
Match: G3P_COLLI (Glyceraldehyde-3-phosphate dehydrogenase OS=Columba livia GN=GAPDH PE=2 SV=3)

HSP 1 Score: 133.65 bits (335), Expect = 1.636e-30
Identity = 69/131 (52.67%), Postives = 87/131 (66.41%), Query Frame = 1
Query:   61 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFV 453
            VK+G+NGFGRIGRLV R  +    V++VA+NDPFI  +YM YMFKYDS HG ++   +K ++ K ++ G   +T+F  R+P  I WA+ GAEYVVESTGVFT               VIISAPS DAPMFV
Sbjct:    2 VKVGVNGFGRIGRLVTRAAILSAKVQVVAINDPFIDLNYMVYMFKYDSTHGHFR-GTVKAENGKLVING-NAITIFQERDPSNIKWADAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFV 130          
BLAST of EY728195 vs. ExPASy Swiss-Prot
Match: G3P_PHANO (Glyceraldehyde-3-phosphate dehydrogenase OS=Phaeosphaeria nodorum GN=GPD1 PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.136e-30
Identity = 70/131 (53.44%), Postives = 88/131 (67.18%), Query Frame = 1
Query:   61 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFV 453
            VK+GINGFGRIGR+V R  ++ +DVE+VAVNDPFI   Y  YM KYDS HGQ+K  ++KV+ +   + G K +  +  ++P  IPW+ETGA YVVESTGVFT               V+ISAPS DAPMFV
Sbjct:    3 VKVGINGFGRIGRIVFRNAIEHNDVEIVAVNDPFIEPHYAAYMLKYDSQHGQFK-GDIKVEGNDLTING-KTIRFYTEKDPANIPWSETGAYYVVESTGVFTTTDKAKAHLKGGAKKVVISAPSADAPMFV 131          
BLAST of EY728195 vs. ExPASy Swiss-Prot
Match: G3P_CURLU (Glyceraldehyde-3-phosphate dehydrogenase OS=Curvularia lunata GN=GPD PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.136e-30
Identity = 72/131 (54.96%), Postives = 85/131 (64.89%), Query Frame = 1
Query:   61 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFV 453
            VK+GINGFGRIGR+V R  ++ +DVE+VAVNDPFI   Y  YM KYDS HGQ+K  ++KV D   L    K V     ++P  IPW+ETGA YVVESTGVFT               V+ISAPS DAPMFV
Sbjct:    3 VKVGINGFGRIGRIVFRNAIEHNDVEIVAVNDPFIEPHYAAYMLKYDSTHGQFK-GDIKV-DGNNLTVNGKTVRFHMEKDPANIPWSETGAYYVVESTGVFTTTEKAKAHLKGGAKKVVISAPSADAPMFV 131          
BLAST of EY728195 vs. ExPASy Swiss-Prot
Match: G3P_COTJA (Glyceraldehyde-3-phosphate dehydrogenase OS=Coturnix coturnix japonica GN=GAPDH PE=2 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 2.136e-30
Identity = 69/131 (52.67%), Postives = 86/131 (65.65%), Query Frame = 1
Query:   61 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFV 453
            VK+G+NGFGRIGRLV R  +    V++VA+NDPFI  +YM YMFKYDS HG +K   +K ++ K ++ G   +T+F  R+P  I W + GAEYVVESTGVFT               VIISAPS DAPMFV
Sbjct:    2 VKVGVNGFGRIGRLVTRAAVLSGKVQVVAINDPFIDLNYMVYMFKYDSTHGHFK-GTVKAENGKLVING-NAITIFQERDPSNIKWGDAGAEYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFV 130          
BLAST of EY728195 vs. ExPASy Swiss-Prot
Match: G3P2_RHIRA (Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Rhizomucor racemosus GN=GPD2 PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 2.136e-30
Identity = 69/130 (53.08%), Postives = 88/130 (67.69%), Query Frame = 1
Query:   64 KIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFV 453
            ++GINGFGRIGR+V R  L   +V++VA+NDPFI  +YM YMFKYDSVHG+++   ++ KD K ++ G K ++VF  R+P +IPW    A YVVESTGVFT               VIISAPS DAPMFV
Sbjct:    4 QVGINGFGRIGRIVLRASLSNPEVQVVAINDPFIPLEYMVYMFKYDSVHGRFQ-GTVEAKDGKLVVNG-KEISVFSERDPAQIPWGSVEAAYVVESTGVFTSIDAASAHLQGGAKKVIISAPSGDAPMFV 131          
BLAST of EY728195 vs. ExPASy Swiss-Prot
Match: G3P_PIG (Glyceraldehyde-3-phosphate dehydrogenase OS=Sus scrofa GN=GAPDH PE=1 SV=4)

HSP 1 Score: 132.494 bits (332), Expect = 3.644e-30
Identity = 68/131 (51.91%), Postives = 85/131 (64.89%), Query Frame = 1
Query:   61 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFV 453
            VK+G+NGFGRIGRLV R       V++VA+NDPFI   YM YMF+YDS HG++ H  +K ++ K ++ G K +T+F  R+P  I W + GA YVVESTGVFT               VIISAPS DAPMFV
Sbjct:    2 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLHYMVYMFQYDSTHGKF-HGTVKAENGKLVING-KAITIFQERDPANIKWGDAGATYVVESTGVFTTMEKAGAHLKGGAKRVIISAPSADAPMFV 130          
BLAST of EY728195 vs. ExPASy Swiss-Prot
Match: G3P_COCP7 (Glyceraldehyde-3-phosphate dehydrogenase OS=Coccidioides posadasii (strain C735) GN=GPD PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 3.644e-30
Identity = 71/131 (54.20%), Postives = 88/131 (67.18%), Query Frame = 1
Query:   61 VKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMFV 453
            VK+GINGFGRIGR+V R  ++  +VE+VAVNDPFI T Y  YM KYDS HG++K  ++K  ++   + G K V  +  R+P  IPWAETGA+YV+ESTGVFT               VIISAPS DAPMFV
Sbjct:    3 VKVGINGFGRIGRIVFRNAVEHPEVEIVAVNDPFIETHYAAYMLKYDSTHGRFK-GDVKFSENGLDVDG-KHVRFYQERDPANIPWAETGADYVIESTGVFTTTEKASAHLKGGAKKVIISAPSADAPMFV 131          
The following BLAST results are available for this feature:
BLAST of EY728195 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 246
Match NameE-valueIdentityDescription
G3P_CANFA1.252e-3051.91Glyceraldehyde-3-phosphate dehydrogenase OS=Canis ... [more]
G3P_SCLSC1.636e-3053.85Glyceraldehyde-3-phosphate dehydrogenase OS=Sclero... [more]
G3P_PICPA1.636e-3051.91Glyceraldehyde-3-phosphate dehydrogenase OS=Pichia... [more]
G3P_COLLI1.636e-3052.67Glyceraldehyde-3-phosphate dehydrogenase OS=Columb... [more]
G3P_PHANO2.136e-3053.44Glyceraldehyde-3-phosphate dehydrogenase OS=Phaeos... [more]
G3P_CURLU2.136e-3054.96Glyceraldehyde-3-phosphate dehydrogenase OS=Curvul... [more]
G3P_COTJA2.136e-3052.67Glyceraldehyde-3-phosphate dehydrogenase OS=Coturn... [more]
G3P2_RHIRA2.136e-3053.08Glyceraldehyde-3-phosphate dehydrogenase 2 OS=Rhiz... [more]
G3P_PIG3.644e-3051.91Glyceraldehyde-3-phosphate dehydrogenase OS=Sus sc... [more]
G3P_COCP73.644e-3054.20Glyceraldehyde-3-phosphate dehydrogenase OS=Coccid... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-108-G01-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY728195 ID=EY728195; Name=EY728195; organism=Citrus sinensis; type=EST; length=976bp
CGCGGTTCCGGGAATTTCCCGGGGTCGACCCCCGCGTCCGCTCGAGAATC
ATGGGGGAAGGTCAAGATCGGAATCAACGGATTCGGAAGAATTGGTAGGC
TGGTGGCAAGAGTCATCTTGCAGAGGGACGATGTTGAACTCGTTGCTGTT
AATGATCCCTTTATCACAACCGATTACATGACATACATGTTTAAGTACGA
CAGTGTTCACGGTCAATGGAAGCACCATGAATTGAAGGTTAAGGACGATA
AGACCCTTCTCTTTGGTGAGAAGCCTGTCACTGTTTTCGGTGTTAGGAAC
CCAGAGGAGATCCCATGGGCTGAGACTGGAGCCGAGTATGTTGTGGAGTC
GACTGGAGTCTTTACTGACAAGGATAAGGCTGCTGCCCATTTGAAGGGTG
GTGCTAAGAAAGTTATCATCTCAGCCCCCAGCAAGGATGCTCCTATGTTT
GTTGGTCGGTGTCAATGAAAAACGAGTACAAACCAGAACTCCAACTTTGT
GGTCCAATGCTAGCTGGCACCACCCACTGCCTTGCTCCCCCCTTGCTAAG
GGCCTTTCTTGACCAGTTTGGGGATTTGTGGAGGTTTGGAAAGAACCCCC
TGTTCCTTCTATTCCTGCGACCCCAAAAAACTGGGGGAAGGGGCCCCTCC
TCACAGGGGATTGGAAGAGGGGGGGCAGGGGCTGCCTTCCTTTCCAACAT
CCTTTCCCTATACAATAATGGGAACCCCCTAAAGGGGTGTTGGAAAAGGC
CTTTGCCTGGCTTTTAAAGGGGAAAAATGAGACGGGTTGGGCTTTCCCGG
GGACCCCAGGGTGGAATTGCCCGGGGGGGTGACCCTCCCAGGGGGAGGGG
GGGGAAAAGAAGGCTCTTTCTTTATGGATAAAAAATTAAAGGCCGCCCCT
ATAGGGGGGGGAGGCAGAAAAGGGGAAAAAAAATAAAGAGGGGAATTTGT
GGGGGAAAAACACCGAGGAGAAAGAA
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