EY754254

Overview
NameEY754254
Unique NameEY754254
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length798
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY754254 vs. ExPASy Swiss-Prot
Match: TRXH_WHEAT (Thioredoxin H-type OS=Triticum aestivum PE=1 SV=3)

HSP 1 Score: 68.5514 bits (166), Expect = 4.731e-11
Identity = 34/101 (33.66%), Postives = 59/101 (58.42%), Query Frame = 1
Query:  328 AVNEVQVVTDSSWENLVISSENP------VLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAV 612
            AV   +V++  S E   +  E        V+++F A WCGPCR++AP   +LAK++   V   K++ D+   IA ++ + ++PT LF K G+ K+ ++GA+
Sbjct:   14 AVGAGEVISVHSLEQWTMQIEEANAAKKLVVIDFTASWCGPCRIMAPIFADLAKKFPAAV-FLKVDVDELKPIAEQFSVEAMPTFLFMKEGDVKDRVVGAI 113          
BLAST of EY754254 vs. ExPASy Swiss-Prot
Match: TRXH_RICCO (Thioredoxin H-type OS=Ricinus communis PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.731e-11
Identity = 32/85 (37.65%), Postives = 53/85 (62.35%), Query Frame = 1
Query:  397 VLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYV 651
            ++V+F A WCGPCR IAP + ELAK+    V   K++ D+   +A ++ + S+PT +F K G+  + ++GA  K  L  T+ K++
Sbjct:   31 IVVDFTASWCGPCRFIAPFLAELAKKLP-NVTFLKVDVDELKTVAHEWAVESMPTFMFLKEGKIMDKVVGA-KKDELQQTIAKHM 113          
BLAST of EY754254 vs. ExPASy Swiss-Prot
Match: PDI_DROME (Protein disulfide-isomerase OS=Drosophila melanogaster GN=Pdi PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.731e-11
Identity = 36/112 (32.14%), Postives = 58/112 (51.79%), Query Frame = 1
Query:  334 NEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKSTLSSTLDKYVE*MAKN 669
            N V+V+  S++E++ +     VLVEF+APWCG C+ +AP  ++LA++Y           D + N      I S PT+ +F+  + K      V    L  TLD +V+ +  N
Sbjct:  367 NPVKVLVSSNFESVALDKSKSVLVEFYAPWCGHCKQLAPIYDQLAEKYKDNEDIVIAKMDSTANELESIKISSFPTIKYFRKEDNK------VIDFNLDRTLDDFVKFLDAN 472          
BLAST of EY754254 vs. ExPASy Swiss-Prot
Match: TXL1_SCHPO (Thioredoxin-like protein 1 OS=Schizosaccharomyces pombe GN=txl1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.070e-11
Identity = 29/74 (39.19%), Postives = 50/74 (67.57%), Query Frame = 1
Query:  403 VEFWAPWCGPCRMIAPAIEELAKEYAGKVACF-KLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGAVPKS 621
            V+ +A WCGPC+ I+P   +LA +YA     F K+N D+   IA+  G++++PT +FF+NG++ + + GA P++
Sbjct:   24 VDCYADWCGPCKAISPLFSQLASKYASPKFVFAKVNVDEQRQIASGLGVKAMPTFVFFENGKQIDMLTGANPQA 97          
BLAST of EY754254 vs. ExPASy Swiss-Prot
Match: PDIA6_ARATH (Probable protein disulfide-isomerase A6 OS=Arabidopsis thaliana GN=At2g47470 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.070e-11
Identity = 33/85 (38.82%), Postives = 51/85 (60.00%), Query Frame = 1
Query:  334 NEVQVVTDSSWENLVISSENPVLVEFWAPWCGPCRMIAPAIEELAKEY--AGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNG 582
            ++V V+TD S+E  V   +   LVEF+APWCG C+ +AP  E+L   +  A  V   K++ D+  ++ TKYG+   PT+ +F  G
Sbjct:   23 DDVVVLTDDSFEKEV-GKDKGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIAKVDCDEQKSVCTKYGVSGYPTIQWFPKG 106          
BLAST of EY754254 vs. ExPASy Swiss-Prot
Match: NGLY1_CAEEL (Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagine amidase OS=Caenorhabditis elegans GN=F56G4.5 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.070e-11
Identity = 28/71 (39.44%), Postives = 47/71 (66.20%), Query Frame = 1
Query:  397 VLVEFWAPWCGPCRMIAPAIEELAKEYAGKVACFKLNTDDSPNIATKYGIRSIPTVLFFKNGEKKESIIGA 609
            ++++F+A WCGPCRMI+P  E+ + EY G     K+N D + +I  +Y I ++PT +F KN ++ + + GA
Sbjct:   25 IIIDFFANWCGPCRMISPIFEQFSAEY-GNATFLKVNCDVARDIVQRYNISAMPTFIFLKNRQQVDMVRGA 94          
The following BLAST results are available for this feature:
BLAST of EY754254 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 126
Match NameE-valueIdentityDescription
TRXH_WHEAT4.731e-1133.66Thioredoxin H-type OS=Triticum aestivum PE=1 SV=3[more]
TRXH_RICCO4.731e-1137.65Thioredoxin H-type OS=Ricinus communis PE=3 SV=1[more]
PDI_DROME4.731e-1132.14Protein disulfide-isomerase OS=Drosophila melanoga... [more]
TXL1_SCHPO8.070e-1139.19Thioredoxin-like protein 1 OS=Schizosaccharomyces ... [more]
PDIA6_ARATH8.070e-1138.82Probable protein disulfide-isomerase A6 OS=Arabido... [more]
NGLY1_CAEEL8.070e-1139.44Peptide-N(4)-(N-acetyl-beta-glucosaminyl)asparagin... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-012-E05-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY754254 ID=EY754254; Name=EY754254; organism=Citrus sinensis; type=EST; length=798bp
ATCGCCCATAAGAGAAGGCCACATCTTCTTCTATACTCCTATCAATACTC
TTCAACTTGCTGTGAACAGAAACATTCCCAGCAAAAGAAAAAAGAAAGAC
AGAGAAAAATGGCTATGAAGAATTGTTTTCAAGTTAGCTCAGTGTATAGC
ACTAGAGCTGGTGTGGTACAATGTTACCAACCATTTTCATCTGTAAAGAA
GATTCATTTGCCGATTGGTAACGGGTTGAATAAATCCAATCTCTCATTCA
CTTCATCATGCTCATCTCTTTCTCTTCCACTCGGAAGCAGAAGCAGAAAC
TCCTTGATTCTCTGCAAAGCTCGGGAAGCTGTCAATGAAGTTCAAGTGGT
GACAGATTCAAGTTGGGAAAACCTTGTGATATCAAGTGAAAACCCTGTGC
TTGTGGAGTTTTGGGCACCTTGGTGCGGACCATGCCGGATGATAGCGCCA
GCTATTGAGGAATTAGCCAAAGAATACGCCGGAAAAGTTGCCTGTTTCAA
GCTCAACACAGATGATTCCCCCAACATTGCAACTAAGTATGGAATTAGAA
GCATTCCAACTGTGCTCTTCTTCAAGAATGGAGAGAAGAAGGAGAGCATC
ATTGGTGCTGTTCCCAAATCTACTTTGTCCTCTACTTTAGATAAATATGT
AGAATGAATGGCCAAAAATCACATTTACATGTTGTATGAATGACATATTA
ATCCAAGTTTATGTTTCATTTCAAATGTAGAAATCTCTTTCCTTCATGTG
TAAATATCGTCATGAANGTGAAATTTTCCTGGAAAAAAAAAAAAAAAA
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