EY754248 | Citrus Genome Database

Overview


Name	EY754248
Unique Name	EY754248
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	976

Libraries


Library Name	Type
Sweet orange leaf, field plant A	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

BLAST of EY754248 vs. ExPASy Swiss-Prot
Match: HIS7_STAAS (Imidazoleglycerol-phosphate dehydratase OS=Staphylococcus aureus (strain MSSA476) GN=hisB PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 8.105e-26
Identity = 54/140 (38.57%), Postives = 89/140 (63.57%), Query Frame = 3

Query:  354 IGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVXTYDTQLVEHFXQSLV 773
            I + +R T ET +++ I+ D S  +  +T + FL+HML     H    +++ A GDI +DDHH  ED+G+ IG  LL+ + D+K   R+G    P+DE L  V +D+SGRP+L+++  +  ++V T+DT+LVE F +++V
Sbjct:    2 IYQKQRNTAETQLNISISDDQSP-SHINTGVGFLNHMLTLFTFHSGLSLNIEAQGDIDVDDHHVTEDIGIVIGQLLLEMIKDKKHFVRYGTMYIPMDETLARVVVDISGRPYLSFNASLSKEKVGTFDTELVEEFFRAVV 140

HSP 2 Score: 26.9498 bits (58), Expect = 8.105e-26
Identity = 18/48 (37.50%), Postives = 22/48 (45.83%), Query Frame = 2

Query:  785 MTLHIRQLAGKNXHHIIEGTFK-------LLLGLXDKHRYDPPSRGTI 907
            +T HI  + G N HH IE  FK       + L   D  R  P S+G I
Sbjct:  145 LTTHIDLIRGGNTHHEIEAIFKAFSRALGIALTATDDQRV-PSSKGVI 191

BLAST of EY754248 vs. ExPASy Swiss-Prot
Match: HIS7_STAAN (Imidazoleglycerol-phosphate dehydratase OS=Staphylococcus aureus (strain N315) GN=hisB PE=1 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 8.105e-26
Identity = 54/140 (38.57%), Postives = 89/140 (63.57%), Query Frame = 3

Query:  354 IGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVXTYDTQLVEHFXQSLV 773
            I + +R T ET +++ I+ D S  +  +T + FL+HML     H    +++ A GDI +DDHH  ED+G+ IG  LL+ + D+K   R+G    P+DE L  V +D+SGRP+L+++  +  ++V T+DT+LVE F +++V
Sbjct:    2 IYQKQRNTAETQLNISISDDQSP-SHINTGVGFLNHMLTLFTFHSGLSLNIEAQGDIDVDDHHVTEDIGIVIGQLLLEMIKDKKHFVRYGTMYIPMDETLARVVVDISGRPYLSFNASLSKEKVGTFDTELVEEFFRAVV 140

HSP 2 Score: 26.9498 bits (58), Expect = 8.105e-26
Identity = 18/48 (37.50%), Postives = 22/48 (45.83%), Query Frame = 2

Query:  785 MTLHIRQLAGKNXHHIIEGTFK-------LLLGLXDKHRYDPPSRGTI 907
            +T HI  + G N HH IE  FK       + L   D  R  P S+G I
Sbjct:  145 LTTHIDLIRGGNTHHEIEAIFKAFSRALGIALTATDDQRV-PSSKGVI 191

BLAST of EY754248 vs. ExPASy Swiss-Prot
Match: HIS7_STAAM (Imidazoleglycerol-phosphate dehydratase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=hisB PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 8.105e-26
Identity = 54/140 (38.57%), Postives = 89/140 (63.57%), Query Frame = 3

Query:  354 IGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVXTYDTQLVEHFXQSLV 773
            I + +R T ET +++ I+ D S  +  +T + FL+HML     H    +++ A GDI +DDHH  ED+G+ IG  LL+ + D+K   R+G    P+DE L  V +D+SGRP+L+++  +  ++V T+DT+LVE F +++V
Sbjct:    2 IYQKQRNTAETQLNISISDDQSP-SHINTGVGFLNHMLTLFTFHSGLSLNIEAQGDIDVDDHHVTEDIGIVIGQLLLEMIKDKKHFVRYGTMYIPMDETLARVVVDISGRPYLSFNASLSKEKVGTFDTELVEEFFRAVV 140

HSP 2 Score: 26.9498 bits (58), Expect = 8.105e-26
Identity = 18/48 (37.50%), Postives = 22/48 (45.83%), Query Frame = 2

Query:  785 MTLHIRQLAGKNXHHIIEGTFK-------LLLGLXDKHRYDPPSRGTI 907
            +T HI  + G N HH IE  FK       + L   D  R  P S+G I
Sbjct:  145 LTTHIDLIRGGNTHHEIEAIFKAFSRALGIALTATDDQRV-PSSKGVI 191

BLAST of EY754248 vs. ExPASy Swiss-Prot
Match: HIS7_STAAE (Imidazoleglycerol-phosphate dehydratase OS=Staphylococcus aureus (strain Newman) GN=hisB PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 8.105e-26
Identity = 54/140 (38.57%), Postives = 89/140 (63.57%), Query Frame = 3

Query:  354 IGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVXTYDTQLVEHFXQSLV 773
            I + +R T ET +++ I+ D S  +  +T + FL+HML     H    +++ A GDI +DDHH  ED+G+ IG  LL+ + D+K   R+G    P+DE L  V +D+SGRP+L+++  +  ++V T+DT+LVE F +++V
Sbjct:    2 IYQKQRNTAETQLNISISDDQSP-SHINTGVGFLNHMLTLFTFHSGLSLNIEAQGDIDVDDHHVTEDIGIVIGQLLLEMIKDKKHFVRYGTMYIPMDETLARVVVDISGRPYLSFNASLSKEKVGTFDTELVEEFFRAVV 140

HSP 2 Score: 26.9498 bits (58), Expect = 8.105e-26
Identity = 18/48 (37.50%), Postives = 22/48 (45.83%), Query Frame = 2

Query:  785 MTLHIRQLAGKNXHHIIEGTFK-------LLLGLXDKHRYDPPSRGTI 907
            +T HI  + G N HH IE  FK       + L   D  R  P S+G I
Sbjct:  145 LTTHIDLIRGGNTHHEIEAIFKAFSRALGIALTATDDQRV-PSSKGVI 191

BLAST of EY754248 vs. ExPASy Swiss-Prot
Match: HIS7_STAAC (Imidazoleglycerol-phosphate dehydratase OS=Staphylococcus aureus (strain COL) GN=hisB PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 8.105e-26
Identity = 54/140 (38.57%), Postives = 89/140 (63.57%), Query Frame = 3

Query:  354 IGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVXTYDTQLVEHFXQSLV 773
            I + +R T ET +++ I+ D S  +  +T + FL+HML     H    +++ A GDI +DDHH  ED+G+ IG  LL+ + D+K   R+G    P+DE L  V +D+SGRP+L+++  +  ++V T+DT+LVE F +++V
Sbjct:    2 IYQKQRNTAETQLNISISDDQSP-SHINTGVGFLNHMLTLFTFHSGLSLNIEAQGDIDVDDHHVTEDIGIVIGQLLLEMIKDKKHFVRYGTMYIPMDETLARVVVDISGRPYLSFNASLSKEKVGTFDTELVEEFFRAVV 140

HSP 2 Score: 26.9498 bits (58), Expect = 8.105e-26
Identity = 18/48 (37.50%), Postives = 22/48 (45.83%), Query Frame = 2

Query:  785 MTLHIRQLAGKNXHHIIEGTFK-------LLLGLXDKHRYDPPSRGTI 907
            +T HI  + G N HH IE  FK       + L   D  R  P S+G I
Sbjct:  145 LTTHIDLIRGGNTHHEIEAIFKAFSRALGIALTATDDQRV-PSSKGVI 191

BLAST of EY754248 vs. ExPASy Swiss-Prot
Match: HIS7_STAA9 (Imidazoleglycerol-phosphate dehydratase OS=Staphylococcus aureus (strain JH9) GN=hisB PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 8.105e-26
Identity = 54/140 (38.57%), Postives = 89/140 (63.57%), Query Frame = 3

Query:  354 IGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVXTYDTQLVEHFXQSLV 773
            I + +R T ET +++ I+ D S  +  +T + FL+HML     H    +++ A GDI +DDHH  ED+G+ IG  LL+ + D+K   R+G    P+DE L  V +D+SGRP+L+++  +  ++V T+DT+LVE F +++V
Sbjct:    2 IYQKQRNTAETQLNISISDDQSP-SHINTGVGFLNHMLTLFTFHSGLSLNIEAQGDIDVDDHHVTEDIGIVIGQLLLEMIKDKKHFVRYGTMYIPMDETLARVVVDISGRPYLSFNASLSKEKVGTFDTELVEEFFRAVV 140

HSP 2 Score: 26.9498 bits (58), Expect = 8.105e-26
Identity = 18/48 (37.50%), Postives = 22/48 (45.83%), Query Frame = 2

Query:  785 MTLHIRQLAGKNXHHIIEGTFK-------LLLGLXDKHRYDPPSRGTI 907
            +T HI  + G N HH IE  FK       + L   D  R  P S+G I
Sbjct:  145 LTTHIDLIRGGNTHHEIEAIFKAFSRALGIALTATDDQRV-PSSKGVI 191

BLAST of EY754248 vs. ExPASy Swiss-Prot
Match: HIS7_STAA8 (Imidazoleglycerol-phosphate dehydratase OS=Staphylococcus aureus (strain NCTC 8325) GN=hisB PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 8.105e-26
Identity = 54/140 (38.57%), Postives = 89/140 (63.57%), Query Frame = 3

Query:  354 IGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVXTYDTQLVEHFXQSLV 773
            I + +R T ET +++ I+ D S  +  +T + FL+HML     H    +++ A GDI +DDHH  ED+G+ IG  LL+ + D+K   R+G    P+DE L  V +D+SGRP+L+++  +  ++V T+DT+LVE F +++V
Sbjct:    2 IYQKQRNTAETQLNISISDDQSP-SHINTGVGFLNHMLTLFTFHSGLSLNIEAQGDIDVDDHHVTEDIGIVIGQLLLEMIKDKKHFVRYGTMYIPMDETLARVVVDISGRPYLSFNASLSKEKVGTFDTELVEEFFRAVV 140

HSP 2 Score: 26.9498 bits (58), Expect = 8.105e-26
Identity = 18/48 (37.50%), Postives = 22/48 (45.83%), Query Frame = 2

Query:  785 MTLHIRQLAGKNXHHIIEGTFK-------LLLGLXDKHRYDPPSRGTI 907
            +T HI  + G N HH IE  FK       + L   D  R  P S+G I
Sbjct:  145 LTTHIDLIRGGNTHHEIEAIFKAFSRALGIALTATDDQRV-PSSKGVI 191

BLAST of EY754248 vs. ExPASy Swiss-Prot
Match: HIS7_STAA3 (Imidazoleglycerol-phosphate dehydratase OS=Staphylococcus aureus (strain USA300) GN=hisB PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 8.105e-26
Identity = 54/140 (38.57%), Postives = 89/140 (63.57%), Query Frame = 3

Query:  354 IGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVXTYDTQLVEHFXQSLV 773
            I + +R T ET +++ I+ D S  +  +T + FL+HML     H    +++ A GDI +DDHH  ED+G+ IG  LL+ + D+K   R+G    P+DE L  V +D+SGRP+L+++  +  ++V T+DT+LVE F +++V
Sbjct:    2 IYQKQRNTAETQLNISISDDQSP-SHINTGVGFLNHMLTLFTFHSGLSLNIEAQGDIDVDDHHVTEDIGIVIGQLLLEMIKDKKHFVRYGTMYIPMDETLARVVVDISGRPYLSFNASLSKEKVGTFDTELVEEFFRAVV 140

HSP 2 Score: 26.9498 bits (58), Expect = 8.105e-26
Identity = 18/48 (37.50%), Postives = 22/48 (45.83%), Query Frame = 2

Query:  785 MTLHIRQLAGKNXHHIIEGTFK-------LLLGLXDKHRYDPPSRGTI 907
            +T HI  + G N HH IE  FK       + L   D  R  P S+G I
Sbjct:  145 LTTHIDLIRGGNTHHEIEAIFKAFSRALGIALTATDDQRV-PSSKGVI 191

BLAST of EY754248 vs. ExPASy Swiss-Prot
Match: HIS7_STAA2 (Imidazoleglycerol-phosphate dehydratase OS=Staphylococcus aureus (strain JH1) GN=hisB PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 8.105e-26
Identity = 54/140 (38.57%), Postives = 89/140 (63.57%), Query Frame = 3

Query:  354 IGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVXTYDTQLVEHFXQSLV 773
            I + +R T ET +++ I+ D S  +  +T + FL+HML     H    +++ A GDI +DDHH  ED+G+ IG  LL+ + D+K   R+G    P+DE L  V +D+SGRP+L+++  +  ++V T+DT+LVE F +++V
Sbjct:    2 IYQKQRNTAETQLNISISDDQSP-SHINTGVGFLNHMLTLFTFHSGLSLNIEAQGDIDVDDHHVTEDIGIVIGQLLLEMIKDKKHFVRYGTMYIPMDETLARVVVDISGRPYLSFNASLSKEKVGTFDTELVEEFFRAVV 140

HSP 2 Score: 26.9498 bits (58), Expect = 8.105e-26
Identity = 18/48 (37.50%), Postives = 22/48 (45.83%), Query Frame = 2

Query:  785 MTLHIRQLAGKNXHHIIEGTFK-------LLLGLXDKHRYDPPSRGTI 907
            +T HI  + G N HH IE  FK       + L   D  R  P S+G I
Sbjct:  145 LTTHIDLIRGGNTHHEIEAIFKAFSRALGIALTATDDQRV-PSSKGVI 191

BLAST of EY754248 vs. ExPASy Swiss-Prot
Match: HIS7_STAA1 (Imidazoleglycerol-phosphate dehydratase OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=hisB PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 8.105e-26
Identity = 54/140 (38.57%), Postives = 89/140 (63.57%), Query Frame = 3

Query:  354 IGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRPHLNYDLQIPTQRVXTYDTQLVEHFXQSLV 773
            I + +R T ET +++ I+ D S  +  +T + FL+HML     H    +++ A GDI +DDHH  ED+G+ IG  LL+ + D+K   R+G    P+DE L  V +D+SGRP+L+++  +  ++V T+DT+LVE F +++V
Sbjct:    2 IYQKQRNTAETQLNISISDDQSP-SHINTGVGFLNHMLTLFTFHSGLSLNIEAQGDIDVDDHHVTEDIGIVIGQLLLEMIKDKKHFVRYGTMYIPMDETLARVVVDISGRPYLSFNASLSKEKVGTFDTELVEEFFRAVV 140

HSP 2 Score: 26.9498 bits (58), Expect = 8.105e-26
Identity = 18/48 (37.50%), Postives = 22/48 (45.83%), Query Frame = 2

Query:  785 MTLHIRQLAGKNXHHIIEGTFK-------LLLGLXDKHRYDPPSRGTI 907
            +T HI  + G N HH IE  FK       + L   D  R  P S+G I
Sbjct:  145 LTTHIDLIRGGNTHHEIEAIFKAFSRALGIALTATDDQRV-PSSKGVI 191

The following BLAST results are available for this feature:

BLAST of EY754248 vs. ExPASy Swiss-Prot

BLAST of EY754248 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500


Match Name	E-value	Identity	Description
HIS7_STAAS	8.105e-26	38.57	Imidazoleglycerol-phosphate dehydratase OS=Staphyl...	[more]
HIS7_STAAN	8.105e-26	38.57	Imidazoleglycerol-phosphate dehydratase OS=Staphyl...	[more]
HIS7_STAAM	8.105e-26	38.57	Imidazoleglycerol-phosphate dehydratase OS=Staphyl...	[more]
HIS7_STAAE	8.105e-26	38.57	Imidazoleglycerol-phosphate dehydratase OS=Staphyl...	[more]
HIS7_STAAC	8.105e-26	38.57	Imidazoleglycerol-phosphate dehydratase OS=Staphyl...	[more]
HIS7_STAA9	8.105e-26	38.57	Imidazoleglycerol-phosphate dehydratase OS=Staphyl...	[more]
HIS7_STAA8	8.105e-26	38.57	Imidazoleglycerol-phosphate dehydratase OS=Staphyl...	[more]
HIS7_STAA3	8.105e-26	38.57	Imidazoleglycerol-phosphate dehydratase OS=Staphyl...	[more]
HIS7_STAA2	8.105e-26	38.57	Imidazoleglycerol-phosphate dehydratase OS=Staphyl...	[more]
HIS7_STAA1	8.105e-26	38.57	Imidazoleglycerol-phosphate dehydratase OS=Staphyl...	[more]

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Properties


Property Name	Value
Genbank description	CS12-C1-001-012-D11-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY754248 ID=EY754248; Name=EY754248; organism=Citrus sinensis; type=EST; length=976bp
GCCGGNATTCCAAGCCCGACCCACGCGTCCGAGAAAAAACTTTGCGTTTT
AGCAAAAGCCGTGTTGGCGTTGCTACTCTCTCTGCGACATTGGAAACGAT
AGTGTGTAAAATGGAGCTCTCGGTCCCAGCTCGCCTTGTTCGCCTTTCAA
TCTCGTCCACGTCCTCACGCCGGCTCCTCGTTAAACCAAAAACCAATCTC
TCTCGTAAACTTCTCCCCATCTCCACACAATACTGCTCCTCAACGCGCCG
CATGAACTCCCTCACAACACCACGCGCCTCTCTAAACCCAGACGGCGACA
GCAAACACAACAACGGGTCCGCCTCAACTTCCTCTGCCGTCGATTCTGGT
CGAATTGGGGAAGTGAAAAGAGTCACGAAAGAGACCAACGTTTCTGTGAA
GATTAACGTCGATGGCTCTGGCGTTGCTGATTCATCCACTTGCATTCCCT
TCCTAGATCACATGCTTGATCAACTGGCTTCGCACGGGCTATTTGATGTG
CACGTGAGGGCAACCGGAGACATTCACATTGATGATCATCATACCAATGA
AGACGTTGGGCTTGCCATTGGCACGGCATTGCTGCAGGCTCTTGGTGATA
GGAAAGGAATTAATCGGTTTGGTGATTTTACAGCTCCTCTTGATGAAGCT
TTGATTCATGTTTCATTGGATTTATCTGGACGGCCACATTTAAATTATGA
TTTGCAAATTCCCACACAGAGAGTGGNAACTTACGACACTCAATTGGTGG
AGCACTTTTTNCAGTCTTTGGTGACACTTCTGGAATGACTCTTCATATTC
GACAGCTNGCTGGAAAAAATNCTCATCACATTATTGAGGGCACCTTCAAG
CTTTTGCTAGGGCTCTNCGACAAGCACAGATATGATCCACCGTCGCGTGG
AACTATACCAGCTCAAAAGGGGTCTACTCGATCTTGATCTTACGGGATCA
TGGACGGGGGATGGGTTCTNATGTAC