EY754247

Overview
NameEY754247
Unique NameEY754247
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length941
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY754247 vs. ExPASy Swiss-Prot
Match: LLDD2_MYCTU (Putative L-lactate dehydrogenase [cytochrome] 2 OS=Mycobacterium tuberculosis GN=lldD2 PE=3 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 9.826e-34
Identity = 70/191 (36.65%), Postives = 106/191 (55.50%), Query Frame = 1
Query:   28 KYNTSTVKMGEITNVMEYEAIDKEKLPKMVFDYYASGAYDQRTLQDNRNAFSRILFPPLILIDVSKINMITTVLGFKISMPIMIAPTSMQKMAHPEGEYATPIAASAAGTIMTLSSWATSSVEEVASTGPDIR-FFQLYVYNDRNVAAQLARRAERAGFKAIALTVDTPTLGRIESDIKNIFTLPPFLTLK 597
            +++TS  ++G    + +   I K + P+  FDY   GA D+ ++   R  F  I F P IL DV+ +     VLG    +P  IAPT   ++ H EGE A   AA+AAG   +LS+ AT ++E++    P  R +FQLY++ DR+ +  L RR   AGF  + +TVD P  G    D++N  ++PP LTL+
Sbjct:   23 QFDTSKRRLGAALTIQDLRRIAKRRTPRAAFDYADGGAEDELSIARARQGFRDIEFHPTILRDVTTVCAGWNVLGQPTVLPFGIAPTGFTRLMHTEGEIAGARAAAAAGIPFSLSTLATCAIEDLVIAVPQGRKWFQLYMWRDRDRSMALVRRVAAAGFDTMLVTVDVPVAGARLRDVRNGMSIPPALTLR 213          

HSP 2 Score: 42.3578 bits (98), Expect = 9.826e-34
Identity = 21/58 (36.21%), Postives = 32/58 (55.17%), Query Frame = 2
Query:  659 YVASQIDRSLICKDVKWLQTITKLPILVNGVLTXYDARIAVQSGAARIIVSNHGARHL 832
            Y+ +  D SL   D+ W+++     ++V G+ T  DAR  V  G   I++SNHG R L
Sbjct:  249 YLNTVFDPSLTFDDLAWIKSQWPGKLVVKGIQTLDDARAVVDRGVDGIVLSNHGGRQL 306          
BLAST of EY754247 vs. ExPASy Swiss-Prot
Match: CYB2_YEAST (Cytochrome b2, mitochondrial OS=Saccharomyces cerevisiae GN=CYB2 PE=1 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 2.160e-33
Identity = 63/180 (35.00%), Postives = 105/180 (58.33%), Query Frame = 1
Query:   52 MGEITNVMEYEAIDKEKLPKMVFDYYASGAYDQRTLQDNRNAFSRILFPPLILIDVSKINMITTVLGFKISMPIMIAPTSMQKMAHP-EGEYATPIAASAAGT-----IMTLSSWATSSVEEVASTGPDIRFFQLYVYNDRNVAAQLARRAERAGFKAIALTVDTPTLGRIESDIKNIFT 573
            +  I N+ ++E +  + L K  + YY+SGA D+ T ++N NA+ RI F P IL+DV K+++ T +LG  + +P  ++ T++ K+ +P EGE           T     I TL+S +   + E A +   I+++QLYV +DR +   L +  E+ G KA+ +TVD P+LG+ E D+K  F+
Sbjct:  199 LDNIINLYDFEYLASQTLTKQAWAYYSSGANDEVTHRENHNAYHRIFFKPKILVDVRKVDISTDMLGSHVDVPFYVSATALCKLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEIIEAAPSDKQIQWYQLYVNSDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFS 378          

HSP 2 Score: 46.9802 bits (110), Expect = 2.160e-33
Identity = 24/62 (38.71%), Postives = 37/62 (59.68%), Query Frame = 2
Query:  647 GLAAYVASQIDRSLICKDVKWLQTITKLPILVNGVLTXYDARIAVQSGAARIIVSNHGARHL 832
            G +  ++  ID SL  KD++ L+  TKLPI++ GV    D   A + G + +++SNHG R L
Sbjct:  397 GASRALSKFIDPSLTWKDIEELKKKTKLPIVIKGVQRTEDVIKAAEIGVSGVVLSNHGGRQL 458          
BLAST of EY754247 vs. ExPASy Swiss-Prot
Match: HAOX2_MOUSE (Hydroxyacid oxidase 2 OS=Mus musculus GN=Hao2 PE=2 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 6.260e-33
Identity = 67/189 (35.45%), Postives = 105/189 (55.56%), Query Frame = 1
Query:   76 EYEAIDKEKLPKMVFDYYASGAYDQRTLQDNRNAFSRILFPPLILIDVSKINMITTVLGFKISMPIMIAPTSMQKMAHPEGEYATPIAASAAGTIMTLSSWATSSVEEVASTGP-DIRFFQLYVYNDRNVAAQLARRAERAGFKAIALTVDTPTLGRIESDIKNIFTLPPFLTLKNFSGFGSLHDGRRT 639
            +++A  +++L K  +D+    A D  T  DN  AF RI   P  L DVSKI+  TT+ G +I+ PI I+PT+   +A  +GE +T  AA  A     +SS+A+ +VE++ +  P  + +FQLYV  D ++  Q+ +R E  GFKA+ +TVD P LG    + +++  L   + LK+    G    G  T
Sbjct:    8 DFKAQAQKQLSKTSWDFIEGEADDGITYNDNLAAFRRIRLRPRYLRDVSKIDTRTTIQGQEINAPICISPTAFHSIAWADGEKSTAKAAQKANICYVISSYASYTVEDIVAAAPGGLHWFQLYVQPDWDINKQMVQRIEALGFKALVVTVDAPVLGNRRGNKRSLLDLEANIKLKDLRSPGESKSGLPT 196          

HSP 2 Score: 49.2914 bits (116), Expect = 6.260e-33
Identity = 23/45 (51.11%), Postives = 32/45 (71.11%), Query Frame = 2
Query:  698 DVKWLQTITKLPILVNGVLTXYDARIAVQSGAARIIVSNHGARHL 832
            D+  LQ++T+LPI++ G+LT  DA +AV+     IIVSNHG R L
Sbjct:  209 DLPLLQSMTRLPIILKGILTKEDAELAVKHNIRGIIVSNHGGRQL 253          
BLAST of EY754247 vs. ExPASy Swiss-Prot
Match: LLDD_AZOC5 (L-lactate dehydrogenase [cytochrome] OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=lldD PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 4.952e-29
Identity = 55/160 (34.38%), Postives = 80/160 (50.00%), Query Frame = 1
Query:   61 ITNVMEYEAIDKEKLPKMVFDYYASGAYDQRTLQDNRNAFSRILFPPLILIDVSKINMITTVLGFKISMPIMIAPTSMQKMAHPEGEYATPIAASAAGTIMTLSSWATSSVEEVASTGPDIRFFQLYVYNDRNVAAQLARRAERAGFKAIALTVDTPTLG 540
            I++  +Y A  K +LP  +F Y   GAY + TL+ N    S I     +L +V+ +++ T + G K++MP+ +AP  +  M    GE     AA A G   TLS+ +   +EEV S      +FQLYV  DR        RA+ AG   +  TVD P  G
Sbjct:    3 ISSPNDYRAAAKSRLPPFLFHYVDGGAYAEYTLRRNVEDLSHIALRQQVLRNVADLSLETELFGQKLTMPVALAPVGLTGMLARRGEVQAAKAAQAKGVPFTLSTVSVCPIEEVQSQCAKPIWFQLYVLKDRGFMRNALERAQAAGINTLIFTVDMPVPG 162          

HSP 2 Score: 55.4546 bits (132), Expect = 4.952e-29
Identity = 33/88 (37.50%), Postives = 48/88 (54.55%), Query Frame = 2
Query:  611 LDPCMMDDAHDSG-----------LAAYV---ASQIDRSLICKDVKWLQTITKLPILVNGVLTXYDARIAVQSGAARIIVSNHGARHL 832
            LD  ++   HD G           LA Y+   A+  D S+  KD++W+++  K P+++ G+L   DAR AV  GA  I+VSNHG R L
Sbjct:  193 LDVGLLGKPHDLGNISTYRGKPTNLADYIGWLAANFDPSISWKDLEWIRSFWKGPMIIKGILDPVDARDAVAFGADGIVVSNHGGRQL 280          
BLAST of EY754247 vs. ExPASy Swiss-Prot
Match: MDLB_PSEPU ((S)-mandelate dehydrogenase OS=Pseudomonas putida GN=mdlB PE=1 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 3.113e-23
Identity = 61/171 (35.67%), Postives = 97/171 (56.73%), Query Frame = 1
Query:   67 NVMEYEAIDKEKLPKMVFDYYASGAYDQRTLQDNRNAFSRILFPPLILIDVSKINMITTVLGFKISMPIMIAPTSMQKMAHPEGEYATPIAASAAGTIMTLSSWATSSVEEVASTGPDIRFFQLYVYNDRNVAAQLARRAERAGFKAIALTVDTPTLGRIESDIKNIFTLP 579
            NV +Y  + +++LPKMV+DY   GA D+  ++ NR+ F +  F P  L+DVS+ ++   VLG + SMP++I PT +     P+G+ A   AA+ AG    LS+ +  S+E++A       +FQLYV + R +A  +  +A   G+  + LT D    G  E D+ N F +P
Sbjct:    7 NVEDYRKLRQKRLPKMVYDYLEGGAEDEYGVKHNRDVFQQWRFKPKRLVDVSRRSLQAEVLGKRQSMPLLIGPTGLNGALWPKGDLALARAATKAGIPFVLSTASNMSIEDLARQCDGDLWFQLYVIH-REIAQGMVLKALHTGYTTLVLTTDVAVNGYRERDLHNRFKIP 176          
BLAST of EY754247 vs. ExPASy Swiss-Prot
Match: LLDD_PSEFS (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas fluorescens (strain SBW25) GN=lldD PE=3 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.888e-20
Identity = 55/160 (34.38%), Postives = 84/160 (52.50%), Query Frame = 1
Query:   61 ITNVMEYEAIDKEKLPKMVFDYYASGAYDQRTLQDNRNAFSRILFPPLILIDVSKINMITTVLGFKISMPIMIAPTSMQKMAHPEGEYATPIAASAAGTIMTLSSWATSSVEEVASTGPDIRFFQLYVYNDRNVAAQLARRAERAGFKAIALTVDTPTLG 540
            I++  +Y A  + KLP+ +FDY   GAY + T++ N +  + I     IL +V  +++ TTV G ++ MP++++P  +  M    GE     AA+  G    LS+ +   +EEVAS      +FQLYV  DR        RA+ AG   +  TVD PT G
Sbjct:    3 ISSASDYRAAAQRKLPRFLFDYIDGGAYAEHTMRANSSDLAEISLRQRILRNVDNLSLKTTVFGQELDMPVILSPVGLTGMYARRGEVQAAKAAANKGVPFCLSTVSVCPIEEVASQSARAIWFQLYVLKDRGFMRNALERAQAAGVTTLVFTVDMPTPG 162          
BLAST of EY754247 vs. ExPASy Swiss-Prot
Match: LLDD_PSEU2 (L-lactate dehydrogenase [cytochrome] OS=Pseudomonas syringae pv. syringae (strain B728a) GN=lldD PE=3 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.224e-19
Identity = 55/160 (34.38%), Postives = 83/160 (51.88%), Query Frame = 1
Query:   61 ITNVMEYEAIDKEKLPKMVFDYYASGAYDQRTLQDNRNAFSRILFPPLILIDVSKINMITTVLGFKISMPIMIAPTSMQKMAHPEGEYATPIAASAAGTIMTLSSWATSSVEEVASTGPDIRFFQLYVYNDRNVAAQLARRAERAGFKAIALTVDTPTLG 540
            I++  +Y A  K KLP+ +FDY   GAY + TL+ N +  + I     +L +V  +++ T + G  ++MPI+++P  +  M    GE     AA+       LS+ +  S+EEVAS      +FQLYV  DR        RA+ AG   +  TVD PT G
Sbjct:    3 ISSASDYRAAAKRKLPRFLFDYIDGGAYAEHTLRANGSDLADISLRQRVLKNVDNVSLETRLFGESLAMPIILSPVGLSGMYARRGEVQVARAAANKRIPFCLSTVSVCSIEEVASQSDQAIWFQLYVLKDRGFMKNALERAKAAGVTTLVFTVDMPTPG 162          
BLAST of EY754247 vs. ExPASy Swiss-Prot
Match: LLDD_VIBPA (L-lactate dehydrogenase [cytochrome] OS=Vibrio parahaemolyticus GN=lldD PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.561e-19
Identity = 53/155 (34.19%), Postives = 79/155 (50.97%), Query Frame = 1
Query:   76 EYEAIDKEKLPKMVFDYYASGAYDQRTLQDNRNAFSRILFPPLILIDVSKINMITTVLGFKISMPIMIAPTSMQKMAHPEGEYATPIAASAAGTIMTLSSWATSSVEEVASTGPDIRFFQLYVYNDRNVAAQLARRAERAGFKAIALTVDTPTLG 540
            +Y A  K KLP  +F Y   G+YD+RTL+ N +    +     +L D++ +++ T + G K++MPI +AP  +  M    GE     AA   G   T+S+ +   +EEVA       +FQLYV  DR     +  RA+ AG   +  TVD P  G
Sbjct:    8 DYRAAAKAKLPPFLFHYIDGGSYDERTLKRNTDDLGDVALRQRVLRDMTDLSLETEIFGEKLAMPIALAPVGLTGMYARRGEVQAAKAAEKKGIPFTMSTVSVCPIEEVAPAIERPMWFQLYVLKDRGFMKNVLERAKAAGVTTLVFTVDMPVPG 162          
BLAST of EY754247 vs. ExPASy Swiss-Prot
Match: LLDD1_MYCTU (Putative L-lactate dehydrogenase [cytochrome] 1 OS=Mycobacterium tuberculosis GN=lldD1 PE=3 SV=2)

HSP 1 Score: 95.1301 bits (235), Expect = 6.075e-19
Identity = 62/172 (36.05%), Postives = 96/172 (55.81%), Query Frame = 1
Query:   94 KEKLPKMVFDYYASGAYDQRTLQDNRNAFSRILFPPLILIDVSKINMITTVLGFKISMPIMIAPTSMQKMAHPEGEYATPIAASAAGTIMTLSSWATSSVEEVASTGPDIRFFQLYVYNDRNVAAQLARRAERAGFKAIALTVD-TPTLGR--------IESDIKNIFTLPP 582
            K +LPK V+    + +    T+ DN  AFS + F P ++    K ++ TTV+G ++S+P++I+PT +Q +  P GE A   AA+A GT+M LSS+A+  +EEV +  P   FFQ+Y    R+  A+   RA +AG   + +T D T + GR         E ++K I  L P
Sbjct:   17 KRRLPKSVYSSLIAASEKGITVADNVAAFSELGFAPHVIGATDKRDLSTTVMGQEVSLPVIISPTGVQAV-DPGGEVAVARAAAARGTVMGLSSFASKPIEEVIAANPK-TFFQVYWQGGRDALAERVERARQAGAVGLVVTTDWTFSHGRDWGSPKIPEEMNLKTILRLSP 186          
BLAST of EY754247 vs. ExPASy Swiss-Prot
Match: LLDD_VIBCM (L-lactate dehydrogenase [cytochrome] OS=Vibrio cholerae serotype O1 (strain M66-2) GN=lldD PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 1.036e-18
Identity = 54/155 (34.84%), Postives = 82/155 (52.90%), Query Frame = 1
Query:   76 EYEAIDKEKLPKMVFDYYASGAYDQRTLQDNRNAFSRILFPPLILIDVSKINMITTVLGFKISMPIMIAPTSMQKMAHPEGEYATPIAASAAGTIMTLSSWATSSVEEVASTGPDIRFFQLYVYNDRNVAAQLARRAERAGFKAIALTVDTPTLG 540
            +Y A  K KLP  +F Y   G+Y + TL+ N +  + I     +L D+S++++ T + G K+++PI ++P  +  M    GE     AA A G   TLS+ +   +EEVA +     +FQLYV  DR     +  RA+ AG K +  TVD P  G
Sbjct:    8 DYRAAAKAKLPPFLFHYIDGGSYGEHTLRRNTDDLADIALRQRVLSDMSELSLETELFGEKMALPIALSPVGLTGMYARRGEVQAAQAAEAKGIPFTLSTVSVCPIEEVAPSIHRPIWFQLYVLKDRGFMKNVLERAKAAGVKNLVFTVDMPVPG 162          
The following BLAST results are available for this feature:
BLAST of EY754247 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
LLDD2_MYCTU9.826e-3436.65Putative L-lactate dehydrogenase [cytochrome] 2 OS... [more]
CYB2_YEAST2.160e-3335.00Cytochrome b2, mitochondrial OS=Saccharomyces cere... [more]
HAOX2_MOUSE6.260e-3335.45Hydroxyacid oxidase 2 OS=Mus musculus GN=Hao2 PE=2... [more]
LLDD_AZOC54.952e-2934.38L-lactate dehydrogenase [cytochrome] OS=Azorhizobi... [more]
MDLB_PSEPU3.113e-2335.67(S)-mandelate dehydrogenase OS=Pseudomonas putida ... [more]
LLDD_PSEFS1.888e-2034.38L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_PSEU21.224e-1934.38L-lactate dehydrogenase [cytochrome] OS=Pseudomona... [more]
LLDD_VIBPA3.561e-1934.19L-lactate dehydrogenase [cytochrome] OS=Vibrio par... [more]
LLDD1_MYCTU6.075e-1936.05Putative L-lactate dehydrogenase [cytochrome] 1 OS... [more]
LLDD_VIBCM1.036e-1834.84L-lactate dehydrogenase [cytochrome] OS=Vibrio cho... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-012-D10-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY754247 ID=EY754247; Name=EY754247; organism=Citrus sinensis; type=EST; length=941bp
CAGTCTTTGTTTACCTTACATTAATTTAAGTACAACACATCAACTGTCAA
GATGGGGGAGATCACAAATGTGATGGAGTATGAGGCCATTGACAAGGAAA
AGTTGCCAAAGATGGTGTTTGATTACTATGCTTCAGGTGCATACGACCAG
AGGACTTTGCAAGATAACAGGAATGCTTTCTCAAGAATCCTGTTTCCACC
TCTCATTCTGATTGATGTAAGCAAAATAAACATGATTACCACTGTCTTGG
GCTTCAAGATATCGATGCCAATCATGATTGCCCCAACATCCATGCAGAAG
ATGGCTCATCCTGAAGGGGAGTATGCTACACCTATAGCTGCATCGGCTGC
TGGAACGATTATGACATTGTCTTCTTGGGCTACTTCTAGCGTTGAAGAGG
TTGCTTCAACAGGACCTGACATCCGCTTTTTCCAGCTCTATGTGTACAAC
GACAGGAATGTGGCTGCTCAGCTTGCGAGAAGGGCTGAAAGAGCCGGATT
CAAGGCCATTGCTCTAACAGTTGATACCCCGACGCTGGGTCGCATAGAAT
CTGACATCAAGAACATATTCACTCTACCACCATTTTTGACATTAAAGAAT
TTTTCGGGGTTTGGATCCTTGCATGATGGACGACGCACATGACTCTGGGC
TTGCTGCCTATGTTGCTAGTCAAATTGATCGTTCTCTGATCTGCAAGGAC
GTGAAGTGGCTTCAAACGATCACCAAATTGCCAATTCTAGTGAATGGTGT
ACTCACANCATACGATGCTCGCATTGCAGTTCAATCTGGAGCAGCTCGGA
TCATTGTATCCAATCATGGAGCTCGTCACCTGACTATGTACCTGCACTAT
CATGGCCTGNAANATGTGTGAAGCTACTCANGGGCGTATCCTGTGTCTGG
ATGGTGGCGTTAGCAAGAACTGATTCTTCAAGCCTTGCCTG
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