EY754237

Overview
NameEY754237
Unique NameEY754237
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length918
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY754237 vs. ExPASy Swiss-Prot
Match: CINS_ARATH (1,8-cineole synthase, chloroplastic OS=Arabidopsis thaliana GN=TPS27 PE=1 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 1.105e-17
Identity = 56/143 (39.16%), Postives = 84/143 (58.74%), Query Frame = 1
Query:  160 ITRVQYHVAASTTPIKPVDQTII---RRSADYGPTIWSFDYIQSLDSKYKGESYARQLEKLKEQVSAMLQQDDKVVDLDPLHQLELIDNLHRLGVSYHFEDEIKRTLDRIHNK--------NTNKSLYATALKFRILRQYGYN 555
            + R    V  S T   P D T++   RRS +Y P+ W+  Y+ S+++KY  E+     + LK++V +ML  + K      L QLELID+L +LGVSYHFE EI  TL  +H K        +  + L+AT+L+FR+LRQ+G++
Sbjct:   22 LRRPHRFVCKSMTKTTP-DTTLVELSRRSGNYQPSPWNHCYLLSIENKYASETEVITRDVLKKKVKSMLDDEKK----SRLEQLELIDDLQKLGVSYHFEIEINDTLTDLHLKMGRNCWKCDKEEDLHATSLEFRLLRQHGFD 159          
BLAST of EY754237 vs. ExPASy Swiss-Prot
Match: DCS1_GOSAR ((+)-delta-cadinene synthase isozyme XC1 OS=Gossypium arboreum PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.483e-17
Identity = 60/179 (33.52%), Postives = 95/179 (53.07%), Query Frame = 1
Query:  226 IRRSADYGPTIWSFDYIQSLDSKYKGESYARQLEKLKEQVSAMLQQDDKVVDLDPLHQLELIDNLHRLGVSYHFEDEIKRTLDRIHNKNTN--KSLYATALKFRILRQYGYNTPVKETFSRFMDEKGIFKLSSHSDDCKGMXXXXXXXXXXXXXXSSIFRDATSFTTAYLKEWVIKHDN 756
            +R  AD+ P+IW   ++   D     E+  R  ++LKE+V  M+         +   +L  ID++ RLGVSYHF  EI+  L+ I++ N +    LY T+++FR+LR++GYN    + F++F DE+G FK SS + D +G+                I  +A SFTT +L   V   D+
Sbjct:   21 MRPKADFQPSIWGDLFLNCPDKNIDAETEKRH-QQLKEEVRKMIVAPMA----NSTQKLAFIDSVQRLGVSYHFTKEIEDELENIYHNNNDAENDLYTTSIRFRLLREHGYNVSC-DVFNKFKDEQGNFK-SSVTSDVRGL-LELYQASYLRVHGEDILDEAISFTTHHLSLAVASLDH 191          
BLAST of EY754237 vs. ExPASy Swiss-Prot
Match: DCS4_GOSAR ((+)-delta-cadinene synthase isozyme C2 OS=Gossypium arboreum GN=CAD1-C2 PE=2 SV=1)

HSP 1 Score: 87.8113 bits (216), Expect = 9.352e-17
Identity = 59/170 (34.71%), Postives = 92/170 (54.12%), Query Frame = 1
Query:  226 IRRSADYGPTIWSFDYIQSLDSKYKGESYARQLEKLKEQVSAMLQQDDKVVDLDPLHQLELIDNLHRLGVSYHFEDEIKRTLDRIHNKNTN--KSLYATALKFRILRQYGYNTPVKETFSRFMDEKGIFKLSSHSDDCKGMXXXXXXXXXXXXXXSSIFRDATSFTTAYL 729
            IR  AD+ P+IW  D+  +   K       ++ ++LKE+V  M+         +   +L  ID++ RLGVSYHF  EI+  L+ I++ N +    LY T+L+FR+LR++GYN    + F++F DE+G FK SS + D +G+                I  +A SFTT +L
Sbjct:   21 IRPKADFQPSIWG-DFFLNCPDKNIDAGTEKRHQQLKEEVRKMIVAPMA----NSTQKLAFIDSVQRLGVSYHFTKEIEDELENIYHNNNDAENDLYTTSLRFRLLREHGYNVSC-DVFNKFKDEQGNFK-SSVTSDVQGL-LELYQASYLRVHGEDILDEAISFTTNHL 182          
BLAST of EY754237 vs. ExPASy Swiss-Prot
Match: DCS2_GOSAR ((+)-delta-cadinene synthase isozyme XC14 OS=Gossypium arboreum PE=2 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.221e-16
Identity = 58/170 (34.12%), Postives = 92/170 (54.12%), Query Frame = 1
Query:  226 IRRSADYGPTIWSFDYIQSLDSKYKGESYARQLEKLKEQVSAMLQQDDKVVDLDPLHQLELIDNLHRLGVSYHFEDEIKRTLDRIHNKNTN--KSLYATALKFRILRQYGYNTPVKETFSRFMDEKGIFKLSSHSDDCKGMXXXXXXXXXXXXXXSSIFRDATSFTTAYL 729
            +R  AD+ P+IW   ++   D     E+  R  ++LKE+V  M+         +   +L  ID++ RLGVSYHF  EI+  L+ I++ N +    LY T+L+FR+LR++G+N    + F++F DE+G FK SS + D +G+                I  +A SFTT +L
Sbjct:   21 MRPKADFQPSIWGDLFLNCPDKNIDAETEKRH-QQLKEEVRKMIVAPMA----NSTQKLAFIDSVQRLGVSYHFTKEIEDELENIYHNNNDAENDLYTTSLRFRLLREHGFNVSC-DVFNKFKDEQGNFK-SSVTSDVRGL-LELYQASYLRVHGEDILDEAISFTTNHL 182          
BLAST of EY754237 vs. ExPASy Swiss-Prot
Match: MYRS2_ARATH (Myrcene/ocimene synthase 2, chloroplastic OS=Arabidopsis thaliana GN=TPS24 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.083e-16
Identity = 53/137 (38.69%), Postives = 76/137 (55.47%), Query Frame = 1
Query:  229 RRSADYGPTIWSFDYIQSLDSKYKGESYARQLEKLKEQVSAMLQQDDKVVDLDPLHQLELIDNLHRLGVSYHFEDEIKRTLDRIHNKN--------TNKSLYATALKFRILRQYGYNTPVKETFSRFMD--EKGIFK 609
            RRS +Y P+ W   Y+ S+++KY  E        LK++V  ML++   V     L +LELID+L +LGVSYHFE EI   L   H +N          + L+ATAL+FR+LRQ+G+    ++ F   +D  E   FK
Sbjct:   47 RRSGNYQPSSWDHSYLLSIENKYVNEKEVITRHVLKKKVKKMLEE---VETKSRLEKLELIDDLQKLGVSYHFEQEINNILTNFHLENGKNIWKCDKEEDLHATALEFRLLRQHGFGVS-EDIFDVIIDKIESNTFK 179          
BLAST of EY754237 vs. ExPASy Swiss-Prot
Match: DCS3_GOSAR ((+)-delta-cadinene synthase isozyme A OS=Gossypium arboreum GN=CAD1-A PE=2 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 6.062e-16
Identity = 63/171 (36.84%), Postives = 91/171 (53.22%), Query Frame = 1
Query:  229 RRSADYGPTIWSFDYIQSLDSKYKGESYARQLEKLKEQVSAMLQQDDKVVDLDPLHQLELIDNLHRLGVSYHFEDEIKRTLDRIH----NKNTNKSLYATALKFRILRQYGYNTPVKETFSRFMDEKGIFKLSSHSDDCKGMXXXXXXXXXXXXXXSSIFRDATSFTTAYL 729
            R  AD+ P IW   +I   D+     +   Q E+LK QV  M+ +    VD D   +L  ID + RLGVSYHFE EI+  L+ I+    N + +  LY TAL+FR+LR++G++    + F++F DE G FK +S + D +G+                I  +A SFTTA L
Sbjct:   21 RPKADFHPGIWGDMFIICPDTDIDAATEL-QYEELKAQVRKMIMEP---VD-DSNQKLPFIDAVQRLGVSYHFEKEIEDELENIYRDTNNNDADTDLYTTALRFRLLREHGFDISC-DAFNKFKDEAGNFK-ASLTSDVQGL-LELYEASYMRVHGEDILDEAISFTTAQL 183          
BLAST of EY754237 vs. ExPASy Swiss-Prot
Match: TPSDA_ABIGR (Limonene synthase, chloroplastic OS=Abies grandis GN=ag10 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 3.009e-15
Identity = 51/143 (35.66%), Postives = 75/143 (52.45%), Query Frame = 1
Query:  229 RRSADYGPTIWSFDYIQSLDSKYKGESYARQLEKLKEQVSAMLQQDDKVVDL-----DPLHQLELIDNLHRLGVSYHFEDEIKRTLDRIHN------------KNTNKSLYATALKFRILRQYGYNTPVKETFSRFMDEKGIF 606
            RR AD+ P +W  D+IQSL S Y G SY+ + E + E+V  M        +L     D L +L ++D++ RLG+  HF++EI+  LD +++             +T   L +TAL  R LR +GYN    +    F DEKG F
Sbjct:   70 RRIADHHPNLWEDDFIQSLSSPYGGSSYSERAETVVEEVKEMFNSIPNNRELFGSQNDLLTRLWMVDSIERLGIDRHFQNEIRVALDYVYSYWKEKEGIGCGRDSTFPDLNSTALALRTLRLHGYNVS-SDVLEYFKDEKGHF 211          
BLAST of EY754237 vs. ExPASy Swiss-Prot
Match: DCS1_GOSHI ((+)-delta-cadinene synthase OS=Gossypium hirsutum GN=CDN1 PE=1 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 5.132e-15
Identity = 58/179 (32.40%), Postives = 94/179 (52.51%), Query Frame = 1
Query:  226 IRRSADYGPTIWSFDYIQSLDSKYKGESYARQLEKLKEQVSAMLQQDDKVVDLDPLHQLELIDNLHRLGVSYHFEDEIKRTLDRIHNKNTN--KSLYATALKFRILRQYGYNTPVKETFSRFMDEKGIFKLSSHSDDCKGMXXXXXXXXXXXXXXSSIFRDATSFTTAYLKEWVIKHDN 756
            +R  AD+ P+IW   ++   D     E+  R  ++LKE+V  M+        L    +L  ID++  LGVSYHF  EI+  L+ I++ N +    LY T+L+FR+LR++G++    + F++F DE+G FK SS + D +G+                I  +A SFT+ +L   V   D+
Sbjct:   21 MRPKADFQPSIWGDFFLNCPDKNIDAETQKRH-QQLKEEVRKMIVAPMANSTL----KLAFIDSVQGLGVSYHFTKEIEDELENIYHNNNDAENDLYTTSLRFRLLREHGFHVSC-DVFNKFKDEQGNFK-SSVTSDVRGL-LELYQASYLRVHGEDILDEAISFTSNHLSLAVASLDH 191          
BLAST of EY754237 vs. ExPASy Swiss-Prot
Match: TPSD5_ABIGR (Gamma-humulene synthase OS=Abies grandis GN=ag5 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.326e-14
Identity = 68/243 (27.98%), Postives = 103/243 (42.39%), Query Frame = 1
Query:  181 VAASTTPIKPVDQTIIRRSADYGPTIWSFDYIQSLDSKYKGESYARQLEKLKEQVSAML--QQDDKVVDLDP--LHQLELIDNLHRLGVSYHFEDEIKRTLDRIH------------NKNTNKSLYATALKFRILRQYGYNTPVKETFSRFMDEKGIFKLSSHSDDCKGMXXXXXXXXXXXXXXSS--------IFRDATSFTTAYLKEWVIKHDNIKHDDEHLCTLVKSCLELHYIXRCQDW 837
            ++ S +P   +  T    +++    +W  D IQSL+S Y   +Y  + EKL E++  +     DD   D D   + +LE++D +  LG+  HF+ EIK  LD ++              +  K L ATAL FR LR + YN         F D+ G F   S  ++                  +S        +  +A +FTT YLK+ V+      H DE L   VK  LE  +    Q W
Sbjct:    4 ISESVSPSTDLKSTESSITSNRHGNMWEDDRIQSLNSPYGAPAYQERSEKLIEEIKLLFLSDMDDSCNDSDRDLIKRLEIVDTVECLGIDRHFQPEIKLALDYVYRCWNERGIGEGSRDSLKKDLNATALGFRALRLHRYNVS-SGVLENFRDDNGQFFCGSTVEEEGAEAYNKHVRCMLSLSRASNILFPGEKVMEEAKAFTTNYLKK-VLAGREATHVDESLLGEVKYALEFPWHCSVQRW 244          
BLAST of EY754237 vs. ExPASy Swiss-Prot
Match: TPSD3_ABIGR (Pinene synthase, chloroplastic OS=Abies grandis GN=ag3 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.326e-14
Identity = 62/204 (30.39%), Postives = 100/204 (49.02%), Query Frame = 1
Query:  187 ASTTPIKPVDQTIIRRSADYGPTIWSFDYIQSLDSKYKGESYARQLEKL----KEQVSAMLQQDDKVVDL--DPLHQLELIDNLHRLGVSYHFEDEIKRTLDRIHN-----------KNTNKSLYATALKFRILRQYGYNTPV-KETFSRFMDEKGIFKLSSH---SDDCKGMXXXXXXXXXXXXXXSSIFRDATSFTTAYLKE 735
            +STT +   D  + RR  D+   +W  D IQSL + Y+ +SY  + EKL    K   ++M  +D +++    D + +L ++D+L RLG+  HF+DEIK  LD +++           ++    L +TAL  R LR +GY  PV  + F  F  + G F  S +    ++ +G+                I  +A  F+T YLKE
Sbjct:   52 SSTTVV--TDDGVRRRMGDFHSNLWDDDVIQSLPTAYEEKSYLERAEKLIGEVKNMFNSMSLEDGELMSPLNDLIQRLWIVDSLERLGIHRHFKDEIKSALDYVYSYWGENGIGCGRESVVTDLNSTALGLRTLRLHGY--PVSSDVFKAFKGQNGQFSCSENIQTDEEIRGV-LNLFRASLIAFPGEKIMDEAEIFSTKYLKE 250          
The following BLAST results are available for this feature:
BLAST of EY754237 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
CINS_ARATH1.105e-1739.161,8-cineole synthase, chloroplastic OS=Arabidopsis... [more]
DCS1_GOSAR5.483e-1733.52(+)-delta-cadinene synthase isozyme XC1 OS=Gossypi... [more]
DCS4_GOSAR9.352e-1734.71(+)-delta-cadinene synthase isozyme C2 OS=Gossypiu... [more]
DCS2_GOSAR1.221e-1634.12(+)-delta-cadinene synthase isozyme XC14 OS=Gossyp... [more]
MYRS2_ARATH2.083e-1638.69Myrcene/ocimene synthase 2, chloroplastic OS=Arabi... [more]
DCS3_GOSAR6.062e-1636.84(+)-delta-cadinene synthase isozyme A OS=Gossypium... [more]
TPSDA_ABIGR3.009e-1535.66Limonene synthase, chloroplastic OS=Abies grandis ... [more]
DCS1_GOSHI5.132e-1532.40(+)-delta-cadinene synthase OS=Gossypium hirsutum ... [more]
TPSD5_ABIGR3.326e-1427.98Gamma-humulene synthase OS=Abies grandis GN=ag5 PE... [more]
TPSD3_ABIGR3.326e-1430.39Pinene synthase, chloroplastic OS=Abies grandis GN... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS12-C1-001-012-C12-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY754237 ID=EY754237; Name=EY754237; organism=Citrus sinensis; type=EST; length=918bp
CGGNATTCACCGGCTCGACCCACGCGTCCGCATATATTTTATCCTTGAAA
TATATTCTAAGTCACGGCTCTTAATCTGCTCTCTTCAATTCCTGCGGCAT
GCAATTTCACCAGATTATCATTACCATTATCAAGCAAAGTTAATGGCTTT
GTTCCTCCTATTACTCGAGTCCAATATCACGTGGCTGCATCCACCACTCC
TATTAAGCCTGTCGATCAAACCATTATTAGGCGATCTGCCGATTACGGGC
CAACCATTTGGAGTTTTGATTATATTCAATCACTTGACAGTAAATATAAG
GGAGAATCGTACGCCAGACAATTGGAAAAGCTGAAGGAGCAAGTAAGCGC
GATGCTACAGCAGGATGATAAAGTGGTGGATTTGGATCCTTTACATCAAC
TTGAGCTCATCGATAATCTGCACAGACTTGGAGTATCTTATCACTTTGAG
GATGAAATAAAAAGAACTTTGGATAGGATACACAACAAGAATACAAATAA
AAGTTTATATGCCACAGCACTCAAATTTAGAATCCTAAGGCAATATGGTT
ACAATACCCCTGTTAAAGAAACTTTTTCACGTTTCATGGATGAGAAGGGG
ATCTTTAAGTTATCAAGCCACAGTGACGACTGCAAAGGAATGTTAGCTCT
CTATGAAGCTGCATACCTNCTGGTAGAAGAAGAAAGCAGTATCTTTCGTG
ATGCGACAAGTTTCACCACCGCATATCTCAAAGAATGGGTAATCAAGCAT
GATAATATTAAACATGATGATGAACATCTTTGTACATTAGTTAAATCATG
CTTGGAACTTCACTACATTNGNAGATGCCAAGATTGGAGCAAGGTGGGTC
ATCGATGTTACGAAAATGGACCAGACTGAGCCCTATCTTGCTCGAGCTTG
CTAAAGTGACTTTATATT
back to top