EY754218

Overview
NameEY754218
Unique NameEY754218
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length862
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY754218 vs. ExPASy Swiss-Prot
Match: DYRK2_HUMAN (Dual specificity tyrosine-phosphorylation-regulated kinase 2 OS=Homo sapiens GN=DYRK2 PE=1 SV=3)

HSP 1 Score: 70.0922 bits (170), Expect = 1.834e-11
Identity = 41/116 (35.34%), Postives = 66/116 (56.90%), Query Frame = 2 
Query:  380 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARNDIGGT-RCVQIRNWFDYRNHIC----ILCMNYVLYTLT*SQKY 712
            DD  G YV    +++  RY +L  +G+G+FGQVV+ +D++  + VA+K+VR+  ++   A  EI +L+ L + D   T   + +   F +RNHIC    +L MN  LY L    K+
Sbjct:  204 DDDQGSYVQVPHDHVAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFELLSMN--LYELIKKNKF 317
[Close]
BLAST of EY754218 vs. ExPASy Swiss-Prot
Match: DYRK2_DROME (Dual specificity tyrosine-phosphorylation-regulated kinase 2 OS=Drosophila melanogaster GN=smi35A PE=1 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.085e-11
Identity = 36/115 (31.30%), Postives = 65/115 (56.52%), Query Frame = 2 
Query:  380 DDKDGHYVFAIGENLTPRYRILSKMGEGTFGQVVECFDNEKKELVAIKIVRSINKYREAAMIEIDVLQRLARNDIGGT-RCVQIRNWFDYRNHICIL--CMNYVLYTLT*SQKYS 715
            DD +G+Y     +++  RY IL  +G+G+FGQV+   D++    VAIKI+R+  ++   A++E+++L  L   D  G+   + + ++  +R H+CI    M+  LY L     Y+
Sbjct:  180 DDDNGNYKIIEHDHIAFRYEILEVIGKGSFGQVIRALDHKTNTHVAIKIIRNKKRFLNQAVVELNILDELREKDADGSHNVIHMLDYTYFRKHLCITFELMSLNLYELIKKNNYN 294
The following BLAST results are available for this feature:
BLAST of EY754218 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
DYRK2_HUMAN1.834e-1135.34Dual specificity tyrosine-phosphorylation-regulate... [more]
DYRK2_DROME4.085e-1131.30Dual specificity tyrosine-phosphorylation-regulate... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-012-B03-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY754218 ID=EY754218; Name=EY754218; organism=Citrus sinensis; type=EST; length=862bp
AATCCCCATTTAGGGTTTCCAACACTGAAAATCATTTCTTCAAAATTTCC
TTAATTTTTTACTCTCAATTTTTTTTAAAGCATTATGATTCAAATTGAGC
TTAATCCATGGCTCTGCTAGGTTTTTTTAATTGAAAATTTAAACAATAAA
AGAAATGGAAACGCAGAGAATTATAGAATTTCCGCATAAAAACATGGACA
AGCGTCCCAGAAAACGACCCCGTTTAACGTGGGACGTTCCGCCTCCTCTT
CCTCCTCCCAAGGTTCTTCCGGCTCTGTATTGTGTTCAGGAGTTTGGGAA
TGGAGGAATGCCCAATTATGCCTGTTCATCCATGTTTTATGGTGCGATTC
CTCGCACCGGATCACCTCCTTGGAGACCTGATGATAAAGACGGACATTAC
GTTTTTGCCATCGGAGAAAATTTAACTCCTCGCTACAGGATTCTCAGCAA
AATGGGTGAAGGGACATTTGGGCAAGTCGTGGAATGTTTTGACAATGAGA
AGAAGGAACTTGTGGCAATCAAAATTGTTCGCTCTATAAACAAGTATCGT
GAAGCAGCCATGATCGAAATTGATGTTCTACAGAGGCTTGCCAGGAATGA
CATTGGTGGCACCCGTTGTGTGCAAATACGGAATTGGTTTGACTATCGTA
ATCATATTTGTATTTTATGCATGAATTACGTCTTATACACACTGACTTGA
AGCCAGAAATATTCTTCTTGTTTCCGCTGAGTATGNTAAAGTCCCCTGAT
TATAGTTTCTATCACGATCGTCAAAGGATGGTTCCTATTTCAGAATCTNC
CCAGTCAAGTGCATTAAGCTAATTGATTTTGAAGCACACATTTGACATCA
GGATACAGCTAT
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