EY754117

Overview
NameEY754117
Unique NameEY754117
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length620
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY754117 vs. ExPASy Swiss-Prot
Match: LEU3_BACCZ (3-isopropylmalate dehydrogenase OS=Bacillus cereus (strain ZK / E33L) GN=leuB PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.440e-13
Identity = 43/96 (44.79%), Postives = 59/96 (61.46%), Query Frame = 3
Query:    3 GVLGLTPSCNLGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTML-RHLELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 287
            G LG+ PS +  E G +L E +HGSAPDIAGKN ANP A++ S   ML +   L  +   I+ AI + +  GK  T D+GG+ TT+ FTKA+   +
Sbjct:  250 GSLGMLPSASHAEKGPSLYEPIHGSAPDIAGKNKANPIAMMRSVAMMLGQSFGLTREGCAIEEAISAVLKSGKC-TEDIGGTETTTSFTKAVMQEM 344          
BLAST of EY754117 vs. ExPASy Swiss-Prot
Match: LEU3_SYNJB (3-isopropylmalate dehydrogenase OS=Synechococcus sp. GN=leuB PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.186e-13
Identity = 42/85 (49.41%), Postives = 55/85 (64.71%), Query Frame = 3
Query:    3 GVLGLTPSCNLGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTT 254
            G +G+ PS +LG  G  L E VHGSAPDIAG++ ANP A +LS   MLR+ L+    ADRI+ A+ + +A+G YRT DL     T
Sbjct:  267 GSIGMLPSASLGSSGPGLYEPVHGSAPDIAGQDKANPIAQVLSGALMLRYSLDQPQAADRIEQAVEAVLAQG-YRTPDLYSEGMT 350          
BLAST of EY754117 vs. ExPASy Swiss-Prot
Match: LEU3_NOVAD (3-isopropylmalate dehydrogenase OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=leuB PE=3 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 3.186e-13
Identity = 46/101 (45.54%), Postives = 61/101 (60.40%), Query Frame = 3
Query:    3 GVLGLTPSCNLGE-----GGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 287
            G +GL  S +LGE     G   L E +HGSAPDIAGK LANP A +LS+  +LRH L L   ADRI+ A+   +A+G     DLGG++ T++   A+   L
Sbjct:  253 GSIGLLASASLGERETEYGTFGLYEPIHGSAPDIAGKGLANPMATILSAAMLLRHSLGLEVAADRIEAAVAKALADG-VLGRDLGGTAGTTEIGDAVLARL 352          
BLAST of EY754117 vs. ExPASy Swiss-Prot
Match: LEU3_HAEIN (3-isopropylmalate dehydrogenase OS=Haemophilus influenzae GN=leuB PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.186e-13
Identity = 41/84 (48.81%), Postives = 55/84 (65.48%), Query Frame = 3
Query:    3 GVLGLTPSCNLGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSST 251
            G +G+ PS +L E G  L E   GSAPDIAGK +ANP A +LS+  MLR+   L++ AD I++A+   +A G +RTADL   ST
Sbjct:  261 GSMGMLPSASLNEEGFGLYEPAGGSAPDIAGKGIANPIAQILSAAMMLRYSFNLNEAADAIESAVQKVLASG-HRTADLADDST 343          
BLAST of EY754117 vs. ExPASy Swiss-Prot
Match: LEU3_STAAW (3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain MW2) GN=leuB PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.162e-13
Identity = 43/96 (44.79%), Postives = 56/96 (58.33%), Query Frame = 3
Query:    3 GVLGLTPSCNLGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 287
            G LGL+PS +    G  L E +HGSAPDIAGKN+ANP  ++LS    LR  L   D AD ++  I + I  G+  TADLGG   T+D  + +   L
Sbjct:  252 GSLGLSPSASFSNDGPRLYEPIHGSAPDIAGKNVANPFGMILSLAMCLRESLNQPDAADELEQHIYNMIEHGQ-TTADLGGKLNTTDIFEILSQKL 346          
BLAST of EY754117 vs. ExPASy Swiss-Prot
Match: LEU3_STAAS (3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain MSSA476) GN=leuB PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.162e-13
Identity = 43/96 (44.79%), Postives = 56/96 (58.33%), Query Frame = 3
Query:    3 GVLGLTPSCNLGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 287
            G LGL+PS +    G  L E +HGSAPDIAGKN+ANP  ++LS    LR  L   D AD ++  I + I  G+  TADLGG   T+D  + +   L
Sbjct:  252 GSLGLSPSASFSNDGPRLYEPIHGSAPDIAGKNVANPFGMILSLAMCLRESLNQPDAADELEQHIYNMIEHGQ-TTADLGGKLNTTDIFEILSQKL 346          
BLAST of EY754117 vs. ExPASy Swiss-Prot
Match: LEU3_STAAR (3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain MRSA252) GN=leuB PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.162e-13
Identity = 43/96 (44.79%), Postives = 56/96 (58.33%), Query Frame = 3
Query:    3 GVLGLTPSCNLGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 287
            G LGL+PS +    G  L E +HGSAPDIAGKN+ANP  ++LS    LR  L   D AD ++  I + I  G+  TADLGG   T+D  + +   L
Sbjct:  252 GSLGLSPSASFSNDGPRLYEPIHGSAPDIAGKNVANPFGMILSLAMCLRESLNQPDAADELEQHIYNMIEHGQ-TTADLGGKLNTTDIFEILSQKL 346          
BLAST of EY754117 vs. ExPASy Swiss-Prot
Match: LEU3_STAAN (3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain N315) GN=leuB PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.162e-13
Identity = 43/96 (44.79%), Postives = 56/96 (58.33%), Query Frame = 3
Query:    3 GVLGLTPSCNLGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 287
            G LGL+PS +    G  L E +HGSAPDIAGKN+ANP  ++LS    LR  L   D AD ++  I + I  G+  TADLGG   T+D  + +   L
Sbjct:  252 GSLGLSPSASFSNDGPRLYEPIHGSAPDIAGKNVANPFGMILSLAMCLRESLNQPDAADELEQHIYNMIEHGQ-TTADLGGKLNTTDIFEILSQKL 346          
BLAST of EY754117 vs. ExPASy Swiss-Prot
Match: LEU3_STAAM (3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=leuB PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.162e-13
Identity = 43/96 (44.79%), Postives = 56/96 (58.33%), Query Frame = 3
Query:    3 GVLGLTPSCNLGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 287
            G LGL+PS +    G  L E +HGSAPDIAGKN+ANP  ++LS    LR  L   D AD ++  I + I  G+  TADLGG   T+D  + +   L
Sbjct:  252 GSLGLSPSASFSNDGPRLYEPIHGSAPDIAGKNVANPFGMILSLAMCLRESLNQPDAADELEQHIYNMIEHGQ-TTADLGGKLNTTDIFEILSQKL 346          
BLAST of EY754117 vs. ExPASy Swiss-Prot
Match: LEU3_STAAB (3-isopropylmalate dehydrogenase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=leuB PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.162e-13
Identity = 43/96 (44.79%), Postives = 56/96 (58.33%), Query Frame = 3
Query:    3 GVLGLTPSCNLGEGGIALAEAVHGSAPDIAGKNLANPTALLLSSVTMLRH-LELHDKADRIQNAILSTIAEGKYRTADLGGSSTTSDFTKAICDHL 287
            G LGL+PS +    G  L E +HGSAPDIAGKN+ANP  ++LS    LR  L   D AD ++  I + I  G+  TADLGG   T+D  + +   L
Sbjct:  252 GSLGLSPSASFSNDGPRLYEPIHGSAPDIAGKNVANPFGMILSLAMCLRESLNQPDAADELEQHIYNMIENGQ-TTADLGGKLNTTDIFEILSQKL 346          
The following BLAST results are available for this feature:
BLAST of EY754117 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 173
Match NameE-valueIdentityDescription
LEU3_BACCZ2.440e-1344.793-isopropylmalate dehydrogenase OS=Bacillus cereus... [more]
LEU3_SYNJB3.186e-1349.413-isopropylmalate dehydrogenase OS=Synechococcus s... [more]
LEU3_NOVAD3.186e-1345.543-isopropylmalate dehydrogenase OS=Novosphingobium... [more]
LEU3_HAEIN3.186e-1348.813-isopropylmalate dehydrogenase OS=Haemophilus inf... [more]
LEU3_STAAW4.162e-1344.793-isopropylmalate dehydrogenase OS=Staphylococcus ... [more]
LEU3_STAAS4.162e-1344.793-isopropylmalate dehydrogenase OS=Staphylococcus ... [more]
LEU3_STAAR4.162e-1344.793-isopropylmalate dehydrogenase OS=Staphylococcus ... [more]
LEU3_STAAN4.162e-1344.793-isopropylmalate dehydrogenase OS=Staphylococcus ... [more]
LEU3_STAAM4.162e-1344.793-isopropylmalate dehydrogenase OS=Staphylococcus ... [more]
LEU3_STAAB4.162e-1344.793-isopropylmalate dehydrogenase OS=Staphylococcus ... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-010-H06-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY754117 ID=EY754117; Name=EY754117; organism=Citrus sinensis; type=EST; length=620bp
TTGGTGTATTGGGCTTAACACCTAGTTGCAACCTTGGGGAAGGAGGAATT
GCCCTTGCTGAAGCTGTTCATGGTTCAGCACCTGATATTGCTGGAAAGAA
TTTGGCAAATCCAACTGCTTTGCTGTTGAGTTCGGTAACAATGTTGCGCC
ATTTGGAGCTCCATGACAAGGCTGATAGGATCCAAAATGCTATCCTGAGC
ACAATTGCAGAGGGGAAGTATCGAACTGCAGATCTTGGTGGCTCTTCAAC
GACATCAGATTTCACAAAGGCAATCTGCGATCATCTTTAAATATTTCTTT
CTACATAGAATTTGAATTCGTGTTCAAGATTTACATTCTACCTTTCTTTT
TTTGAGCAATGTCTCAAATTTGTTTTTTTCCCCCCTTTTTAAAGTGTTTT
TCTTTGAGGGGAATAAGACCCATCACCTTGGTGACTATTTAGAAGTTTTT
TTCTGATGAAACTGTTCAGCCAGAGTGTATATGGCCGTCCTCAGAAAAGG
TATTTATACGGCAATATTTATTTCCTCGCTGTCTGTGAAATTCCAAAAAT
TGAACTAACCGATCTTGAGAAAATTGTTCACAGCGTGTGTTGTCAAAAAA
AAAAAAAAAAAAAAAAAAAA
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