EY753997

Overview
NameEY753997
Unique NameEY753997
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length911
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753997 vs. ExPASy Swiss-Prot
Match: STX_APLCA (Syntaxin OS=Aplysia californica PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.638e-14
Identity = 58/224 (25.89%), Postives = 107/224 (47.77%), Query Frame = 1
Query:  163 MEGFNKQIQDIEKQVXXXXXXXXXXXXXNEESKSVTKASEMKAIKKRMEKDVDEVGKIARNVKAKIEAINRENLANRQKPGCEKGTSVDRSRMNVTNALTKRFKELMTEFQTLXXXXXXXXXXXXXXXXXXXXGTRPDEETIDHLIETGNSEQIFQKAIQEQGRGQVLNTLEEIQERHDAVKEIEKKLLDLQQIYMDMAVLVEAQGEILXHIXRQVTHAVDHVQ 834
            ME F +Q+ +I + +             +    S  +  +   +K+ +E+ + E+ K A  V+AK++ I  +N+   Q+    K ++  R R      L+++F E+M ++                        T  +EE ++ +IE+GN     Q  I E    Q   TL +I+ RH+ + ++E  + DL  ++MDMA+LVE+QGE++  I   V  AVD+++
Sbjct:   32 MEEFFEQVDEIREMIDKIASNVDEVKKKHSAILSAPQTDDK--MKEELEELMSEIKKNANKVRAKLKVIE-QNI--EQEEHTNKSSADLRIRKTQHATLSRKFVEVMNDYNACQIDYRERCKGRIKRQLAITGKTTTNEE-LEDMIESGNPAIFTQGIIMETQ--QANETLADIEARHNDIMKLETSIRDLHDMFMDMAMLVESQGEMIDRIEYNVEQAVDYIE 247          
BLAST of EY753997 vs. ExPASy Swiss-Prot
Match: STX1A_PONAB (Syntaxin-1A OS=Pongo abelii GN=STX1A PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.638e-14
Identity = 58/250 (23.20%), Postives = 117/250 (46.80%), Query Frame = 1
Query:   85 DARGQPSRDNDIEMGTRVPRSSSDMGMEGFNKQIQDIEKQVXXXXXXXXXXXXXNEESKSVTKASEMKAIKKRMEKDVDEVGKIARNVKAKIEAINRENLANRQKPGCEKGTSVDRSRMNVTNALTKRFKELMTEFQTLXXXXXXXXXXXXXXXXXXXXGTRPDEETIDHLIETGNSEQIFQKAIQEQGRGQVLNTLEEIQERHDAVKEIEKKLLDLQQIYMDMAVLVEAQGEILXHIXRQVTHAVDHVQ 834
            + R     D+D ++   V R   D  M+ F +Q+++I   +              + S  +   +  +  K+ +E+ + ++ K A  V++K+++I +   +  Q+ G  + ++  R R    + L+++F E+M+E+                        T   EE ++ ++E+GN        I +    +    L EI+ RH  + ++E  + +L  ++MDMA+LVE+QGE++  I   V HAVD+V+
Sbjct:    7 ELRTAKDSDDDDDVAVTVDR---DRFMDEFFEQVEEIRGFIDKIAENVEEVK--RKHSAILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQ---SIEQEEGLNRSSADLRIRKTQHSTLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEE-LEDMLESGNPAIFASGIIMDSSISK--QALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVE 245          
BLAST of EY753997 vs. ExPASy Swiss-Prot
Match: STX1A_HUMAN (Syntaxin-1A OS=Homo sapiens GN=STX1A PE=1 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 5.638e-14
Identity = 58/250 (23.20%), Postives = 117/250 (46.80%), Query Frame = 1
Query:   85 DARGQPSRDNDIEMGTRVPRSSSDMGMEGFNKQIQDIEKQVXXXXXXXXXXXXXNEESKSVTKASEMKAIKKRMEKDVDEVGKIARNVKAKIEAINRENLANRQKPGCEKGTSVDRSRMNVTNALTKRFKELMTEFQTLXXXXXXXXXXXXXXXXXXXXGTRPDEETIDHLIETGNSEQIFQKAIQEQGRGQVLNTLEEIQERHDAVKEIEKKLLDLQQIYMDMAVLVEAQGEILXHIXRQVTHAVDHVQ 834
            + R     D+D ++   V R   D  M+ F +Q+++I   +              + S  +   +  +  K+ +E+ + ++ K A  V++K+++I +   +  Q+ G  + ++  R R    + L+++F E+M+E+                        T   EE ++ ++E+GN        I +    +    L EI+ RH  + ++E  + +L  ++MDMA+LVE+QGE++  I   V HAVD+V+
Sbjct:    7 ELRTAKDSDDDDDVAVTVDR---DRFMDEFFEQVEEIRGFIDKIAENVEEVK--RKHSAILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQ---SIEQEEGLNRSSADLRIRKTQHSTLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEE-LEDMLESGNPAIFASGIIMDSSISK--QALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVE 245          
BLAST of EY753997 vs. ExPASy Swiss-Prot
Match: STX1A_RAT (Syntaxin-1A OS=Rattus norvegicus GN=Stx1a PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.616e-14
Identity = 58/250 (23.20%), Postives = 117/250 (46.80%), Query Frame = 1
Query:   85 DARGQPSRDNDIEMGTRVPRSSSDMGMEGFNKQIQDIEKQVXXXXXXXXXXXXXNEESKSVTKASEMKAIKKRMEKDVDEVGKIARNVKAKIEAINRENLANRQKPGCEKGTSVDRSRMNVTNALTKRFKELMTEFQTLXXXXXXXXXXXXXXXXXXXXGTRPDEETIDHLIETGNSEQIFQKAIQEQGRGQVLNTLEEIQERHDAVKEIEKKLLDLQQIYMDMAVLVEAQGEILXHIXRQVTHAVDHVQ 834
            + R     D+D ++   V R   D  M+ F +Q+++I   +              + S  +   +  +  K+ +E+ + ++ K A  V++K+++I +   +  Q+ G  + ++  R R    + L+++F E+M+E+                        T   EE ++ ++E+GN        I +    +    L EI+ RH  + ++E  + +L  ++MDMA+LVE+QGE++  I   V HAVD+V+
Sbjct:    7 ELRTAKDSDDDDDVTVTVDR---DRFMDEFFEQVEEIRGFIDKIAENVEEVK--RKHSAILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQ---SIEQEEGLNRSSADLRIRKTQHSTLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEE-LEDMLESGNPAIFASGIIMDSSISK--QALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVE 245          
BLAST of EY753997 vs. ExPASy Swiss-Prot
Match: STX1A_MOUSE (Syntaxin-1A OS=Mus musculus GN=Stx1a PE=1 SV=3)

HSP 1 Score: 77.411 bits (189), Expect = 1.256e-13
Identity = 58/250 (23.20%), Postives = 117/250 (46.80%), Query Frame = 1
Query:   85 DARGQPSRDNDIEMGTRVPRSSSDMGMEGFNKQIQDIEKQVXXXXXXXXXXXXXNEESKSVTKASEMKAIKKRMEKDVDEVGKIARNVKAKIEAINRENLANRQKPGCEKGTSVDRSRMNVTNALTKRFKELMTEFQTLXXXXXXXXXXXXXXXXXXXXGTRPDEETIDHLIETGNSEQIFQKAIQEQGRGQVLNTLEEIQERHDAVKEIEKKLLDLQQIYMDMAVLVEAQGEILXHIXRQVTHAVDHVQ 834
            + R     D+D ++   V R   D  M+ F +Q+++I   +              + S  +   +  +  K+ +E+ + ++ K A  V++K+++I +   +  Q+ G  + ++  R R    + L+++F E+M+E+                        T   EE ++ ++E+GN        I +    +    L EI+ RH  + ++E  + +L  ++MDMA+LVE+QGE++  I   V HAVD+V+
Sbjct:    7 ELRTAKDSDDDDDVTVTVDR---DRFMDEFFEQVEEIRGFIDKIAENVEEVK--RKHSAILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQ---SIEQEEGLNRSSADLRIRKTQHSTLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEE-LEDMLESGNPAIFASGIIMDSSISK--QALSEIETRHSEIIKLETSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVE 245          
BLAST of EY753997 vs. ExPASy Swiss-Prot
Match: STX1A_BOVIN (Syntaxin-1A OS=Bos taurus GN=STX1A PE=1 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 2.142e-13
Identity = 57/250 (22.80%), Postives = 117/250 (46.80%), Query Frame = 1
Query:   85 DARGQPSRDNDIEMGTRVPRSSSDMGMEGFNKQIQDIEKQVXXXXXXXXXXXXXNEESKSVTKASEMKAIKKRMEKDVDEVGKIARNVKAKIEAINRENLANRQKPGCEKGTSVDRSRMNVTNALTKRFKELMTEFQTLXXXXXXXXXXXXXXXXXXXXGTRPDEETIDHLIETGNSEQIFQKAIQEQGRGQVLNTLEEIQERHDAVKEIEKKLLDLQQIYMDMAVLVEAQGEILXHIXRQVTHAVDHVQ 834
            + R     D+D ++   V R   D  M+ F +Q+++I   +              + S  +   +  +  K+ +E+ + ++ K A  V++K+++I +   +  Q+ G  + ++  R R    + L+++F E+M+E+                        T   EE ++ ++E+GN        I +    +    L EI+ RH  + ++E  + +L  ++MDMA+LVE+QGE++  I   V H+VD+V+
Sbjct:    7 ELRTAKDSDDDDDVTVTVDR---DRFMDEFFEQVEEIRGFIDKISENVEEVK--RKHSAILASPNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQ---SIEQEEGLNRSSADLRIRKTQHSTLSRKFVEVMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEE-LEDMLESGNPAIFASGIIMDSSISK--QALSEIETRHSEIIKLENSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHSVDYVE 245          
BLAST of EY753997 vs. ExPASy Swiss-Prot
Match: STX2_MOUSE (Syntaxin-2 OS=Mus musculus GN=Stx2 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.773e-13
Identity = 64/245 (26.12%), Postives = 115/245 (46.94%), Query Frame = 1
Query:  106 RDNDIEMGTRVPRSSSDMGMEGFNKQIQDIEKQVXXXXXXXXXXXXXNEESKSVTKASEMKAIKKRMEKDVDEVGKIARNVKAKIEAINRENLANRQKPGCEKGTSVD-RSRMNVTNALTKRFKELMTEFQTLXXXXXXXXXXXXXXXXXXXXGTRPDEETIDHLIETGNSEQIFQKAIQE-QGRGQVLNTLEEIQERHDAVKEIEKKLLDLQQIYMDMAVLVEAQGEILXHIXRQVTHAVDHVQ 834
            R ND +  T V     D  M+GF  Q+++I   +                S  ++  +    IK+ +E    E+ K A  ++ K+++I  E   ++ + G    TSVD R R    + L+++F ++MTE+                        T  D+E ++ ++E+G         I + Q   Q LN   EI+ RH  + ++E  + +L +++MDMA+ VE QGE++ +I R V ++VD+V+
Sbjct:   12 RTND-DGDTAVVIVEKDHFMDGFFHQVEEIRSSIARIAQHVEDVK--KNHSIILSAPNPEGKIKEELEDLDKEIKKTANRIRGKLKSI--EQSCDQDENG--NRTSVDLRIRRTQHSVLSRKFVDVMTEYNEAQILFRERSKGRIQRQLEITGRTTTDDE-LEEMLESGKPSIFISDIISDSQITRQALN---EIESRHKDIMKLETSIRELHEMFMDMAMFVETQGEMVNNIERNVVNSVDYVE 245          
BLAST of EY753997 vs. ExPASy Swiss-Prot
Match: STX2_RAT (Syntaxin-2 OS=Rattus norvegicus GN=Stx2 PE=2 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 8.141e-13
Identity = 54/183 (29.51%), Postives = 94/183 (51.37%), Query Frame = 1
Query:  292 IKKRMEKDVDEVGKIARNVKAKIEAINRENLANRQKPGCEKGTSVD-RSRMNVTNALTKRFKELMTEFQTLXXXXXXXXXXXXXXXXXXXXGTRPDEETIDHLIETGNSEQIFQKAIQE-QGRGQVLNTLEEIQERHDAVKEIEKKLLDLQQIYMDMAVLVEAQGEILXHIXRQVTHAVDHVQ 834
            IK+ +E    E+ K A  ++ K++AI  E   ++ + G    TSVD R R    + L+++F ++MTE+                        T  DEE ++ ++E+G         I + Q   Q LN   EI+ RH  + ++E  + +L +++MDMA+ VE QGE++ +I R V ++VD+V+
Sbjct:   72 IKEELEDLNKEIKKTANRIRGKLKAI--EQSCDQDENG--NRTSVDLRIRRTQHSVLSRKFVDVMTEYNEAQILFRERSKGRIQRQLEITGRTTTDEE-LEEMLESGKPSIFISDIISDSQITRQALN---EIESRHKDIMKLETSIRELHEMFMDMAMFVETQGEMVNNIERNVVNSVDYVE 246          
BLAST of EY753997 vs. ExPASy Swiss-Prot
Match: STX1A_CAEEL (Syntaxin-1A homolog OS=Caenorhabditis elegans GN=unc-64 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.063e-12
Identity = 61/253 (24.11%), Postives = 117/253 (46.25%), Query Frame = 1
Query:   73 SFVSDARGQPSRDNDIEMGTRVPRSSSDMGMEGFNKQIQDIEKQVXXXXXXXXXXXXXNEESKSVTKASEMKAIKKRMEKDVDEVGKIARNVKAKIEAINRENLANRQKPGCEKGTSVDRSRMNVTNALTKRFKELMTEFQTLXXXXXXXXXXXXXXXXXXXXGTRPDEETIDHLIETGNSEQIFQKAIQEQGRGQVLNTLEEIQERHDAVKEIEKKLLDLQQIYMDMAVLVEAQGEILXHIXRQVTHAVDHV 831
            S +  A+ +  +D+D+ M T      +   ME F +Q+++I   V              + S  ++     +  K+ +++ +  + + A  V+ K++ I  EN  +  + G   G +  R R    + L++RF E+MT++                       G +  +E ++ +IE+GN     Q  I +    Q   TL +I+ RH+ + ++E  + +L  ++MDMA+LVE+QGE++  I   V HA + V
Sbjct:    7 SALKAAQSEDEQDDDMHMDT-----GNAQYMEEFFEQVEEIRGSVDIIANNVEEVK--KKHSAILSNPVNDQKTKEELDELMAVIKRAANKVRGKLKLI--ENAIDHDEQGA--GNADLRIRKTQHSTLSRRFVEVMTDYNKTQTDYRERCKGRIQRQLDIA-GKQVGDEDLEEMIESGNPGVFTQGIITDTQ--QAKQTLADIEARHNDIMKLESSIRELHDMFMDMAMLVESQGEMVDRIEYNVEHAKEFV 245          
BLAST of EY753997 vs. ExPASy Swiss-Prot
Match: STX1B_SHEEP (Syntaxin-1B OS=Ovis aries GN=STX1B PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.369e-12
Identity = 58/244 (23.77%), Postives = 116/244 (47.54%), Query Frame = 1
Query:  103 SRDNDIEMGTRVPRSSSDMGMEGFNKQIQDIEKQVXXXXXXXXXXXXXNEESKSVTKASEMKAIKKRMEKDVDEVGKIARNVKAKIEAINRENLANRQKPGCEKGTSVDRSRMNVTNALTKRFKELMTEFQTLXXXXXXXXXXXXXXXXXXXXGTRPDEETIDHLIETGNSEQIFQKAIQEQGRGQVLNTLEEIQERHDAVKEIEKKLLDLQQIYMDMAVLVEAQGEILXHIXRQVTHAVDHVQ 834
            ++D+D E    V     D  M+ F +Q+++I   +              + S  +   +  +  K+ +E    ++ K A  V++K++AI +   +  Q+ G  + ++  R R    + L+++F E+MTE+                        T  +EE ++ ++E+G    IF   I+   +      L EI+ RH+ + ++E  + +L  +++DMA+LVE+QGE++  I   V H+VD+V+
Sbjct:   11 AKDSDDE--EEVVHVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVK--KQHSAILAAPNPDEKTKQELEDLTTDIKKTANKVRSKLKAIEQ---SIEQEEGLNRSSADLRIRKTQHSTLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTNEE-LEDMLESGKLA-IFTDDIKMDSQ-MTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSVDYVE 244          
The following BLAST results are available for this feature:
BLAST of EY753997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
STX_APLCA5.638e-1425.89Syntaxin OS=Aplysia californica PE=2 SV=1[more]
STX1A_PONAB5.638e-1423.20Syntaxin-1A OS=Pongo abelii GN=STX1A PE=2 SV=1[more]
STX1A_HUMAN5.638e-1423.20Syntaxin-1A OS=Homo sapiens GN=STX1A PE=1 SV=1[more]
STX1A_RAT9.616e-1423.20Syntaxin-1A OS=Rattus norvegicus GN=Stx1a PE=1 SV=... [more]
STX1A_MOUSE1.256e-1323.20Syntaxin-1A OS=Mus musculus GN=Stx1a PE=1 SV=3[more]
STX1A_BOVIN2.142e-1322.80Syntaxin-1A OS=Bos taurus GN=STX1A PE=1 SV=1[more]
STX2_MOUSE4.773e-1326.12Syntaxin-2 OS=Mus musculus GN=Stx2 PE=2 SV=1[more]
STX2_RAT8.141e-1329.51Syntaxin-2 OS=Rattus norvegicus GN=Stx2 PE=2 SV=2[more]
STX1A_CAEEL1.063e-1224.11Syntaxin-1A homolog OS=Caenorhabditis elegans GN=u... [more]
STX1B_SHEEP2.369e-1223.77Syntaxin-1B OS=Ovis aries GN=STX1B PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-009-D05-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753997 ID=EY753997; Name=EY753997; organism=Citrus sinensis; type=EST; length=911bp
ATTCAAAGGCTGACCCACGCGTCCGGTTTCGCNCTGGTGAATTTGATCAA
TATGAACGACCTGCTCACGGATTCGTTTGTCAGTGATGCCAGAGGCCAGC
CTTCTAGAGATAATGATATCGAAATGGGCACACGGGTTCCTAGGAGTAGC
TCTGACATGGGAATGGAAGGTTTCAATAAGCAGATACAAGATATCGAAAA
GCAGGTTGACAAGCTCTCTGCGCTACTTAAGAAACTGAAGGATGCAAATG
AGGAGTCAAAATCTGTAACAAAAGCTTCTGAAATGAAAGCTATCAAAAAG
CGGATGGAGAAAGATGTCGATGAAGTGGGAAAGATTGCACGGAATGTCAA
AGCAAAAATAGAAGCTATAAACAGAGAGAACTTGGCCAACCGGCAAAAGC
CTGGATGTGAAAAGGGAACTAGTGTTGACAGATCAAGGATGAATGTCACA
AATGCTTTGACAAAAAGATTCAAGGAACTAATGACAGAGTTTCAGACTCT
AAGACAAAGGATCCAAGAGGAGTATCGTGAGGTTGTGGAAAGACGAGTCA
TTACAGTTACTGGAACCAGACCAGATGAGGAGACAATTGACCACCTGATA
GAAACTGGAAACAGTGAGCAAATCTTCCAGAAGGCAATTCAAGAGCAGGG
ACGAGGACAGGTGCTGAACACCTTAGAAGAAATCCAGGAGAGACACGATG
CCGTCAAGGAAATTGAGAAGAAGCTTCTTGACTTGCAGCAGATTTACATG
GATATGGCAGTTCTAGTTGAGGCCCAAGGAGAAATTTTGGNACACATTNG
AAGGCAGGTGACACATGCAGTGGACCATGTTCAACTGGGCACGGATGCTC
TTCGATAGCAAAACGCTTCAGAGAAGATCAGAAATGCATGATGATTGCAT
TATCTTGTNCT
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