EY753997

Overview
NameEY753997
Unique NameEY753997
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length911
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753997 vs. ExPASy Swiss-Prot
Match: STX1B_BOVIN (Syntaxin-1B OS=Bos taurus GN=STX1B PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.369e-12
Identity = 58/244 (23.77%), Postives = 116/244 (47.54%), Query Frame = 1
Query:  103 SRDNDIEMGTRVPRSSSDMGMEGFNKQIQDIEKQVXXXXXXXXXXXXXNEESKSVTKASEMKAIKKRMEKDVDEVGKIARNVKAKIEAINRENLANRQKPGCEKGTSVDRSRMNVTNALTKRFKELMTEFQTLXXXXXXXXXXXXXXXXXXXXGTRPDEETIDHLIETGNSEQIFQKAIQEQGRGQVLNTLEEIQERHDAVKEIEKKLLDLQQIYMDMAVLVEAQGEILXHIXRQVTHAVDHVQ 834
            ++D+D E    V     D  M+ F +Q+++I   +              + S  +   +  +  K+ +E    ++ K A  V++K++AI +   +  Q+ G  + ++  R R    + L+++F E+MTE+                        T  +EE ++ ++E+G    IF   I+   +      L EI+ RH+ + ++E  + +L  +++DMA+LVE+QGE++  I   V H+VD+V+
Sbjct:   11 AKDSDDE--EEVVHVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVK--KQHSAILAAPNPDEKTKQELEDLTTDIKKTANKVRSKLKAIEQ---SIEQEEGLNRSSADLRIRKTQHSTLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTNEE-LEDMLESGKLA-IFTDDIKMDSQ-MTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSVDYVE 244          
BLAST of EY753997 vs. ExPASy Swiss-Prot
Match: STX1B_RAT (Syntaxin-1B OS=Rattus norvegicus GN=Stx1b PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.094e-12
Identity = 58/244 (23.77%), Postives = 116/244 (47.54%), Query Frame = 1
Query:  103 SRDNDIEMGTRVPRSSSDMGMEGFNKQIQDIEKQVXXXXXXXXXXXXXNEESKSVTKASEMKAIKKRMEKDVDEVGKIARNVKAKIEAINRENLANRQKPGCEKGTSVDRSRMNVTNALTKRFKELMTEFQTLXXXXXXXXXXXXXXXXXXXXGTRPDEETIDHLIETGNSEQIFQKAIQEQGRGQVLNTLEEIQERHDAVKEIEKKLLDLQQIYMDMAVLVEAQGEILXHIXRQVTHAVDHVQ 834
            ++D+D E    V     D  M+ F +Q+++I   +              + S  +   +  +  K+ +E    ++ K A  V++K++AI +   +  Q+ G  + ++  R R    + L+++F E+MTE+                        T  +EE ++ ++E+G    IF   I+   +      L EI+ RH+ + ++E  + +L  +++DMA+LVE+QGE++  I   V H+VD+V+
Sbjct:   11 AKDSDDE--EEVVHVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVK--KQHSAILAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQ---SIEQEEGLNRSSADLRIRKTQHSTLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTNEE-LEDMLESGKLA-IFTDDIKMDSQ-MTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSVDYVE 244          
BLAST of EY753997 vs. ExPASy Swiss-Prot
Match: STX1B_MOUSE (Syntaxin-1B OS=Mus musculus GN=Stx1b PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.094e-12
Identity = 58/244 (23.77%), Postives = 116/244 (47.54%), Query Frame = 1
Query:  103 SRDNDIEMGTRVPRSSSDMGMEGFNKQIQDIEKQVXXXXXXXXXXXXXNEESKSVTKASEMKAIKKRMEKDVDEVGKIARNVKAKIEAINRENLANRQKPGCEKGTSVDRSRMNVTNALTKRFKELMTEFQTLXXXXXXXXXXXXXXXXXXXXGTRPDEETIDHLIETGNSEQIFQKAIQEQGRGQVLNTLEEIQERHDAVKEIEKKLLDLQQIYMDMAVLVEAQGEILXHIXRQVTHAVDHVQ 834
            ++D+D E    V     D  M+ F +Q+++I   +              + S  +   +  +  K+ +E    ++ K A  V++K++AI +   +  Q+ G  + ++  R R    + L+++F E+MTE+                        T  +EE ++ ++E+G    IF   I+   +      L EI+ RH+ + ++E  + +L  +++DMA+LVE+QGE++  I   V H+VD+V+
Sbjct:   11 AKDSDDE--EEVVHVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVK--KQHSAILAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQ---SIEQEEGLNRSSADLRIRKTQHSTLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTNEE-LEDMLESGKLA-IFTDDIKMDSQ-MTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSVDYVE 244          
BLAST of EY753997 vs. ExPASy Swiss-Prot
Match: STX1B_HUMAN (Syntaxin-1B OS=Homo sapiens GN=STX1B PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.094e-12
Identity = 58/244 (23.77%), Postives = 116/244 (47.54%), Query Frame = 1
Query:  103 SRDNDIEMGTRVPRSSSDMGMEGFNKQIQDIEKQVXXXXXXXXXXXXXNEESKSVTKASEMKAIKKRMEKDVDEVGKIARNVKAKIEAINRENLANRQKPGCEKGTSVDRSRMNVTNALTKRFKELMTEFQTLXXXXXXXXXXXXXXXXXXXXGTRPDEETIDHLIETGNSEQIFQKAIQEQGRGQVLNTLEEIQERHDAVKEIEKKLLDLQQIYMDMAVLVEAQGEILXHIXRQVTHAVDHVQ 834
            ++D+D E    V     D  M+ F +Q+++I   +              + S  +   +  +  K+ +E    ++ K A  V++K++AI +   +  Q+ G  + ++  R R    + L+++F E+MTE+                        T  +EE ++ ++E+G    IF   I+   +      L EI+ RH+ + ++E  + +L  +++DMA+LVE+QGE++  I   V H+VD+V+
Sbjct:   11 AKDSDDE--EEVVHVDRDHFMDEFFEQVEEIRGCIEKLSEDVEQVK--KQHSAILAAPNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQ---SIEQEEGLNRSSADLRIRKTQHSTLSRKFVEVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTNEE-LEDMLESGKLA-IFTDDIKMDSQ-MTKQALNEIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSVDYVE 244          
BLAST of EY753997 vs. ExPASy Swiss-Prot
Match: STX1A_CAEBR (Syntaxin-1A OS=Caenorhabditis briggsae GN=unc-64 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 4.040e-12
Identity = 59/248 (23.79%), Postives = 113/248 (45.56%), Query Frame = 1
Query:   88 ARGQPSRDNDIEMGTRVPRSSSDMGMEGFNKQIQDIEKQVXXXXXXXXXXXXXNEESKSVTKASEMKAIKKRMEKDVDEVGKIARNVKAKIEAINRENLANRQKPGCEKGTSVDRSRMNVTNALTKRFKELMTEFQTLXXXXXXXXXXXXXXXXXXXXGTRPDEETIDHLIETGNSEQIFQKAIQEQGRGQVLNTLEEIQERHDAVKEIEKKLLDLQQIYMDMAVLVEAQGEILXHIXRQVTHAVDHV 831
            A+ +  +D+D+ M T      +   ME F +Q+++I   V              + S  ++     +  K+ +++ +  + + A  V+ K++ I  EN     +     G +  R R    + L++RF E+MT++                       G +  +E ++ +IE+GN     Q  I +    Q   TL +I+ RH+ + ++E  + +L  ++MDMA+LVE+QGE++  I   V HA + V
Sbjct:   12 AQSEDEQDDDMHMET-----GNAQYMEEFFEQVEEIRGSVDIIANNVEEVK--KKHSAILSNPVNDQKTKEELDELMAVIKRAANKVRGKLKLI--ENAIEHDENQQGAGNADLRIRKTQHSTLSRRFVEVMTDYNKTQTDYRERCKGRIQRQLDIA-GKQVGDEDLEEMIESGNPGVFTQGIITDTQ--QAKQTLADIEARHNDIMKLESSIRELHDMFMDMAMLVESQGEMVDRIEYNVEHAKEFV 247          
BLAST of EY753997 vs. ExPASy Swiss-Prot
Match: STX2_HUMAN (Syntaxin-2 OS=Homo sapiens GN=STX2 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 5.277e-12
Identity = 54/183 (29.51%), Postives = 92/183 (50.27%), Query Frame = 1
Query:  292 IKKRMEKDVDEVGKIARNVKAKIEAINRENLANRQKPGCEKGTSVD-RSRMNVTNALTKRFKELMTEFQTLXXXXXXXXXXXXXXXXXXXXGTRPDEETIDHLIETGNSEQIFQKAIQE-QGRGQVLNTLEEIQERHDAVKEIEKKLLDLQQIYMDMAVLVEAQGEILXHIXRQVTHAVDHVQ 834
            IK+ +E    E+ K A  ++AK++AI  E   ++ + G    TSVD R R    + L+++F E M E+                        T  D+E ++ ++E+G         I + Q   Q LN   EI+ RH  + ++E  + +L +++MDMA+ VE QGE++ +I R V +A D+V+
Sbjct:   70 IKEELEDLNKEIKKTANKIRAKLKAI--EQSFDQDESG--NRTSVDLRIRRTQHSVLSRKFVEAMAEYNEAQTLFRERSKGRIQRQLEITGRTTTDDE-LEEMLESGKPSIFTSDIISDSQITRQALN---EIESRHKDIMKLETSIRELHEMFMDMAMFVETQGEMINNIERNVMNATDYVE 244          
BLAST of EY753997 vs. ExPASy Swiss-Prot
Match: STX3_RAT (Syntaxin-3 OS=Rattus norvegicus GN=Stx3 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.535e-11
Identity = 48/184 (26.09%), Postives = 88/184 (47.83%), Query Frame = 1
Query:  295 KKRMEKDVDEVGKIARNVKAKIEAINRENLANRQKPGCEKGTSVDRSRMNVTNALTKRFKELMTEFQTLXXXXXXXXXXXXXXXXXXXXGTRPDEETIDHLIETGNSEQIFQKAIQEQGRGQVLNTLEEIQERHDAVKEIEKKLLDLQQIYMDMAVLVEAQGEILXHIXRQVTHAVDHVQLGTD 846
            K  +E+   E+ K A NV+ K++++ +    +  +   +      R R +  + L+++F E+MT++                       G +  +E ++ ++E+GN        I  Q   Q L+   EI+ RH  +  +E  + +L  ++MD+A+LVE QGE+L +I   V H VDHV+   D
Sbjct:   74 KDDLEQLTTEIKKRANNVRNKLKSMEKHIEEDEVRSSADL-----RIRKSQHSVLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEIT-GKKTTDEELEEMLESGNPAIFTSGIIDSQISKQALS---EIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVMHTVDHVEKARD 248          
BLAST of EY753997 vs. ExPASy Swiss-Prot
Match: STX3_MOUSE (Syntaxin-3 OS=Mus musculus GN=Stx3 PE=2 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.535e-11
Identity = 48/184 (26.09%), Postives = 88/184 (47.83%), Query Frame = 1
Query:  295 KKRMEKDVDEVGKIARNVKAKIEAINRENLANRQKPGCEKGTSVDRSRMNVTNALTKRFKELMTEFQTLXXXXXXXXXXXXXXXXXXXXGTRPDEETIDHLIETGNSEQIFQKAIQEQGRGQVLNTLEEIQERHDAVKEIEKKLLDLQQIYMDMAVLVEAQGEILXHIXRQVTHAVDHVQLGTD 846
            K  +E+   E+ K A NV+ K++++ +    +  +   +      R R +  + L+++F E+MT++                       G +  +E ++ ++E+GN        I  Q   Q L+   EI+ RH  +  +E  + +L  ++MD+A+LVE QGE+L +I   V H VDHV+   D
Sbjct:   74 KDDLEQLTTEIKKRANNVRNKLKSMEKHIEEDEVRSSADL-----RIRKSQHSVLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEIT-GKKTTDEELEEMLESGNPAIFTSGIIDSQISKQALS---EIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVMHTVDHVEKARD 248          
BLAST of EY753997 vs. ExPASy Swiss-Prot
Match: STX3_HUMAN (Syntaxin-3 OS=Homo sapiens GN=STX3 PE=1 SV=3)

HSP 1 Score: 70.4774 bits (171), Expect = 1.535e-11
Identity = 48/184 (26.09%), Postives = 88/184 (47.83%), Query Frame = 1
Query:  295 KKRMEKDVDEVGKIARNVKAKIEAINRENLANRQKPGCEKGTSVDRSRMNVTNALTKRFKELMTEFQTLXXXXXXXXXXXXXXXXXXXXGTRPDEETIDHLIETGNSEQIFQKAIQEQGRGQVLNTLEEIQERHDAVKEIEKKLLDLQQIYMDMAVLVEAQGEILXHIXRQVTHAVDHVQLGTD 846
            K  +E+   E+ K A NV+ K++++ +    +  +   +      R R +  + L+++F E+MT++                       G +  +E ++ ++E+GN        I  Q   Q L+   EI+ RH  +  +E  + +L  ++MD+A+LVE QGE+L +I   V H VDHV+   D
Sbjct:   74 KDDLEQLTTEIKKRANNVRNKLKSMEKHIEEDEVRSSADL-----RIRKSQHSVLSRKFVEVMTKYNEAQVDFRERSKGRIQRQLEIT-GKKTTDEELEEMLESGNPAIFTSGIIDSQISKQALS---EIEGRHKDIVRLESSIKELHDMFMDIAMLVENQGEMLDNIELNVMHTVDHVEKARD 248          
The following BLAST results are available for this feature:
BLAST of EY753997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
STX1B_BOVIN2.369e-1223.77Syntaxin-1B OS=Bos taurus GN=STX1B PE=1 SV=1[more]
STX1B_RAT3.094e-1223.77Syntaxin-1B OS=Rattus norvegicus GN=Stx1b PE=1 SV=... [more]
STX1B_MOUSE3.094e-1223.77Syntaxin-1B OS=Mus musculus GN=Stx1b PE=1 SV=1[more]
STX1B_HUMAN3.094e-1223.77Syntaxin-1B OS=Homo sapiens GN=STX1B PE=2 SV=1[more]
STX1A_CAEBR4.040e-1223.79Syntaxin-1A OS=Caenorhabditis briggsae GN=unc-64 P... [more]
STX2_HUMAN5.277e-1229.51Syntaxin-2 OS=Homo sapiens GN=STX2 PE=1 SV=2[more]
STX3_RAT1.535e-1126.09Syntaxin-3 OS=Rattus norvegicus GN=Stx3 PE=2 SV=1[more]
STX3_MOUSE1.535e-1126.09Syntaxin-3 OS=Mus musculus GN=Stx3 PE=2 SV=1[more]
STX3_HUMAN1.535e-1126.09Syntaxin-3 OS=Homo sapiens GN=STX3 PE=1 SV=3[more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-009-D05-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753997 ID=EY753997; Name=EY753997; organism=Citrus sinensis; type=EST; length=911bp
ATTCAAAGGCTGACCCACGCGTCCGGTTTCGCNCTGGTGAATTTGATCAA
TATGAACGACCTGCTCACGGATTCGTTTGTCAGTGATGCCAGAGGCCAGC
CTTCTAGAGATAATGATATCGAAATGGGCACACGGGTTCCTAGGAGTAGC
TCTGACATGGGAATGGAAGGTTTCAATAAGCAGATACAAGATATCGAAAA
GCAGGTTGACAAGCTCTCTGCGCTACTTAAGAAACTGAAGGATGCAAATG
AGGAGTCAAAATCTGTAACAAAAGCTTCTGAAATGAAAGCTATCAAAAAG
CGGATGGAGAAAGATGTCGATGAAGTGGGAAAGATTGCACGGAATGTCAA
AGCAAAAATAGAAGCTATAAACAGAGAGAACTTGGCCAACCGGCAAAAGC
CTGGATGTGAAAAGGGAACTAGTGTTGACAGATCAAGGATGAATGTCACA
AATGCTTTGACAAAAAGATTCAAGGAACTAATGACAGAGTTTCAGACTCT
AAGACAAAGGATCCAAGAGGAGTATCGTGAGGTTGTGGAAAGACGAGTCA
TTACAGTTACTGGAACCAGACCAGATGAGGAGACAATTGACCACCTGATA
GAAACTGGAAACAGTGAGCAAATCTTCCAGAAGGCAATTCAAGAGCAGGG
ACGAGGACAGGTGCTGAACACCTTAGAAGAAATCCAGGAGAGACACGATG
CCGTCAAGGAAATTGAGAAGAAGCTTCTTGACTTGCAGCAGATTTACATG
GATATGGCAGTTCTAGTTGAGGCCCAAGGAGAAATTTTGGNACACATTNG
AAGGCAGGTGACACATGCAGTGGACCATGTTCAACTGGGCACGGATGCTC
TTCGATAGCAAAACGCTTCAGAGAAGATCAGAAATGCATGATGATTGCAT
TATCTTGTNCT
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