EY727702

Overview
NameEY727702
Unique NameEY727702
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length1039
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY727702 vs. ExPASy Swiss-Prot
Match: GYAR_AERPE (Glyoxylate reductase OS=Aeropyrum pernix GN=gyaR PE=3 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 5.770e-13
Identity = 51/169 (30.18%), Postives = 89/169 (52.66%), Query Frame = 2
Query:  116 NKFKFLKAWES--PLPLDQFLKTHAQSVEAILSSGGAPVTAETLRLMPAVRLVMTTSAGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVK--QWLRPRQAAEGDCYSLGIGSKLGGKRVGIVGLGSIGSLVAKRLNAFGCSISYNSRTKK 610
            +K+  ++ W+   P P +  L + A+  +A+ +     +  + L   P +R+V   + G +++D+    R GI V N   V +E  A+    L++   R +  +D FV+  +W R R    G    + +G +L GK +GI+G+G IGS VA+   AFG  I Y+SR++K
Sbjct:   21 SKYYDVEVWDKYQPPPYETLL-SKAREADALYTLLTDRIDCDLLSQAPRLRIVAQMAVGFDNIDVECATRLGIYVTNTPGVLTEATAEFTWALILAAARRVVEADHFVRWGEWWRLRT---GWHPMMMLGVELRGKTLGILGMGRIGSRVAEIGKAFGMRIIYHSRSRK 185          
BLAST of EY727702 vs. ExPASy Swiss-Prot
Match: SERA_MYCTU (D-3-phosphoglycerate dehydrogenase OS=Mycobacterium tuberculosis GN=serA PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.863e-12
Identity = 44/131 (33.59%), Postives = 68/131 (51.91%), Query Frame = 2
Query:  194 EAILSSGGAPVTAETLRLMPAVRLVMTTSAGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAEGDCYSLGIGSKLGGKRVGIVGLGSIGSLVAKRLNAFGCSI 586
            +A+L      V AE L   P +++V     GL++VD+     RG+ V NA        A+ A+ LL+   R I A+D  +++    R +          G+++ GK VG+VGLG IG LVA+R+ AFG  +
Sbjct:   45 DALLVRSATTVDAEVLAAAPKLKIVARAGVGLDNVDVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFS--------GTEIFGKTVGVVGLGRIGQLVAQRIAAFGAYV 167          
BLAST of EY727702 vs. ExPASy Swiss-Prot
Match: SERA_MYCBO (D-3-phosphoglycerate dehydrogenase OS=Mycobacterium bovis GN=serA PE=3 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.863e-12
Identity = 44/131 (33.59%), Postives = 68/131 (51.91%), Query Frame = 2
Query:  194 EAILSSGGAPVTAETLRLMPAVRLVMTTSAGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAEGDCYSLGIGSKLGGKRVGIVGLGSIGSLVAKRLNAFGCSI 586
            +A+L      V AE L   P +++V     GL++VD+     RG+ V NA        A+ A+ LL+   R I A+D  +++    R +          G+++ GK VG+VGLG IG LVA+R+ AFG  +
Sbjct:   45 DALLVRSATTVDAEVLAAAPKLKIVARAGVGLDNVDVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKRSSFS--------GTEIFGKTVGVVGLGRIGQLVAQRIAAFGAYV 167          
BLAST of EY727702 vs. ExPASy Swiss-Prot
Match: GHRB_ERWT9 (Glyoxylate/hydroxypyruvate reductase B OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=ghrB PE=3 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.740e-12
Identity = 64/216 (29.63%), Postives = 95/216 (43.98%), Query Frame = 2
Query:   50 PRVLLFKP-PPDFHLFGDECFSSNKFKFLKAWESPLPLDQFLKTHAQSVEAILSSGGAPVTAETLRLMPAVRLVMTTSAGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVK--QWLRPRQAAEGDCYSLGIGSKLGGKRVGIVGLGSIGSLVAKRLN-AFGCSISYNSRTKKPSGSYPFYSNVRETCSLTANSSLFC 685
            P V+L+K  P D     DE     +   L A       D F     +  E IL SGG  V AE LR  P +R+  + S G ++ D+A    RG+ + +   V +E VAD  + L++   R +      VK  +W        G   S   G  +  K++GI+G+G IG  +A+R +  FG  I YN+R         F +   +  +L A S   C
Sbjct:    3 PSVVLYKSLPEDLRARLDEHCHVTEINGLTAENIAKHEDVF-----RQAEGILGSGGK-VDAEFLRQAPKLRVASSISVGYDNFDVAALNDRGVLLMHTPTVLTETVADTMMALVLSSARRVVEMAERVKSGEW-------RGSISSDWFGIDVHHKKLGILGMGRIGLALAQRAHLGFGMPILYNARKHHDEAEQRFDAEYCDLDTLLAESDFLC 205          
BLAST of EY727702 vs. ExPASy Swiss-Prot
Match: SERA_MYCLE (D-3-phosphoglycerate dehydrogenase OS=Mycobacterium leprae GN=serA PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 8.331e-12
Identity = 43/131 (32.82%), Postives = 67/131 (51.15%), Query Frame = 2
Query:  194 EAILSSGGAPVTAETLRLMPAVRLVMTTSAGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAEGDCYSLGIGSKLGGKRVGIVGLGSIGSLVAKRLNAFGCSI 586
            +A+L      V AE L   P +++V     GL++VD+     RG+ V NA        A+ A+ LL+   R I+ +D  ++  +  R +          G+++ GK VG+VGLG IG LVA R+ AFG  +
Sbjct:   45 DALLVRSATTVDAEVLAAAPKLKIVARAGVGLDNVDVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIAEADASLRAHIWKRSSFS--------GTEIFGKTVGVVGLGRIGQLVAARIAAFGAHV 167          
BLAST of EY727702 vs. ExPASy Swiss-Prot
Match: GHRB_KLEP3 (Glyoxylate/hydroxypyruvate reductase B OS=Klebsiella pneumoniae (strain 342) GN=ghrB PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 1.088e-11
Identity = 64/219 (29.22%), Postives = 100/219 (45.66%), Query Frame = 2
Query:   50 PRVLLFKPPPDFHLFG-DECFSSNKFKFLKAWESPLPLDQFLKTHAQSVEAILSSGGAPVTAETLRLMPAVRLVMTTSAGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVK--QWLRPRQAAEGDCYSLG---IGSKLGGKRVGIVGLGSIGSLVAKRLN-AFGCSISYNSRTKKPSGSYPFYSNVRETCSLTANSSLFC 685
            P V+L+K  PD  L   +E FS  + K L+    P  + Q  +  AQ+ E +L S    V A  L  MP +R   T S G ++ D+     R + + +   V +E VAD  + L++   R +      VK  +W +          S+G    GS +  K +GIVG+G IG  +A+R +  FG  I YN+R + P     F +   +  +L   +   C
Sbjct:    3 PSVILYKTLPDDLLQRLEEHFSVTQVKNLR----PETVSQHAEAFAQA-EGLLGSS-EKVDAALLEKMPKLRATSTVSVGYDNFDVEALNARRVLLMHTPTVLTETVADTVMALVLSTARRVVEVAERVKAGEWTK----------SIGPDWFGSDVHHKTLGIVGMGRIGMALAQRAHFGFGMPILYNARRQHPQAEERFNARYCDLDTLLQEADFVC 205          
BLAST of EY727702 vs. ExPASy Swiss-Prot
Match: DHGY_HYPME (Glycerate dehydrogenase OS=Hyphomicrobium methylovorum PE=1 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.856e-11
Identity = 46/148 (31.08%), Postives = 77/148 (52.03%), Query Frame = 2
Query:  152 LPLDQFLKTHAQSVEAILSSGGAPVTAETLRLMPA-VRLVMTTSAGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAEGDCYSLGIGSKLGGKRVGIVGLGSIGSLVAKRLNAFGCSISY 592
            + +D+ ++T A+SV+A+L +       E +  +P  ++ + T S G +H+D+  C+ RGI V NA +  +   A++A+ LL+   R     ++ +    R R     +   L +G KL  K +GI G GSIG  +AKR   F   I Y
Sbjct:   35 ITIDEMIET-AKSVDALLITLNEKCRKEVIDRIPENIKCISTYSIGFDHIDLDACKARGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMI----RTRSWPGWEPLEL-VGEKLDNKTLGIYGFGSIGQALAKRAQGFDMDIDY 176          
BLAST of EY727702 vs. ExPASy Swiss-Prot
Match: GHRB_KLEP7 (Glyoxylate/hydroxypyruvate reductase B OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=ghrB PE=3 SV=1)

HSP 1 Score: 70.0922 bits (170), Expect = 2.424e-11
Identity = 63/219 (28.77%), Postives = 100/219 (45.66%), Query Frame = 2
Query:   50 PRVLLFKPPPDFHLFG-DECFSSNKFKFLKAWESPLPLDQFLKTHAQSVEAILSSGGAPVTAETLRLMPAVRLVMTTSAGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVK--QWLRPRQAAEGDCYSLG---IGSKLGGKRVGIVGLGSIGSLVAKRLN-AFGCSISYNSRTKKPSGSYPFYSNVRETCSLTANSSLFC 685
            P V+L+K  PD  L   +E FS  + K L+    P  + Q  +  AQ+ E +L S    V A  L  MP +R   T S G ++ D+     R + + +   V +E VAD  + L++   R +      VK  +W +          S+G    G+ +  K +GIVG+G IG  +A+R +  FG  I YN+R + P     F +   +  +L   +   C
Sbjct:    3 PSVILYKTLPDDLLQRLEEHFSVTQVKNLR----PETVSQHAEAFAQA-EGLLGSS-EKVDAALLEKMPKLRATSTVSVGYDNFDVEALNARRVLLMHTPTVLTETVADTVMALVLSTARRVVEVAERVKAGEWTK----------SIGPDWFGTDVHHKTLGIVGMGRIGMALAQRAHFGFGMPILYNARRQHPQAEERFNARYCDLDTLLQEADFVC 205          
BLAST of EY727702 vs. ExPASy Swiss-Prot
Match: Y1888_STAEQ (Putative 2-hydroxyacid dehydrogenase SERP1888 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP1888 PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 4.135e-11
Identity = 41/147 (27.89%), Postives = 69/147 (46.94%), Query Frame = 2
Query:  170 LKTHAQSVEAILSSGGAPVTAETLRLMPAVRLVMTTSAGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVKQWLRPRQAAEGDCYSLGIGSKLGGKRVGIVGLGSIGSLVAKRLNAFGCSISYNSRTKK 610
            LK   +  +A++S     V  + +     ++++    AG N++D+   R++ I V N  +  +   ADL +GL++ + R I   D      L      +G       G ++ GK +GI+GLG IG  VAKR  AF   + Y    +K
Sbjct:   38 LKKGVEHADALISLLSTSVDKDIIDSANNLKIIANYGAGFNNIDVEYARQQNIDVTNTPHASTNATADLTIGLILSVARRIVEGDH-----LSRTTGFDGWAPLFFRGREVSGKTIGIIGLGEIGGAVAKRARAFDMDVLYTGPHRK 179          
BLAST of EY727702 vs. ExPASy Swiss-Prot
Match: GHRB_YERPY (Glyoxylate/hydroxypyruvate reductase B OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=ghrB PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 4.135e-11
Identity = 59/216 (27.31%), Postives = 96/216 (44.44%), Query Frame = 2
Query:   50 PRVLLFKP-PPDFHLFGDECFSSNKFKFLKAWESPLPLDQFLKTHAQSVEAILSSGGAPVTAETLRLMPAVRLVMTTSAGLNHVDIAECRRRGITVANAGNVFSEDVADLAVGLLIDLLRNISASDRFVK--QWLRPRQAAEGDCYSLGIGSKLGGKRVGIVGLGSIGSLVAKRLN-AFGCSISYNSRTKKPSGSYPFYSNVRETCSLTANSSLFC 685
            P ++L+K  P D H    + F+ N F  L     P      L    Q  E ++ SGG  +  + L+L P +R   T S G ++ D+    +RGI + +   V +E VAD  + L++   R +      VK  +W    Q + GD +    G  +  K +GI+G+G IG  +A+R +  F   + Y SR    +    F +      +L A +   C
Sbjct:    3 PSIVLYKSIPTDLHQRLAQHFTVNSFDGLTPDNQPE-----LLAALQQAEGLIGSGGK-IDQDFLQLAPNLRAASTISVGYDNFDVEALSQRGIALMHTPTVLTETVADTMMALMLSTARRVVELAERVKAGEW----QESIGDDW---FGVDVHHKTIGILGMGRIGMALAQRAHFGFSMPVLYTSRRPHEAAEQRFGARHCSLDTLLAEADFLC 205          
The following BLAST results are available for this feature:
BLAST of EY727702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 32
Match NameE-valueIdentityDescription
GYAR_AERPE5.770e-1330.18Glyoxylate reductase OS=Aeropyrum pernix GN=gyaR P... [more]
SERA_MYCTU2.863e-1233.59D-3-phosphoglycerate dehydrogenase OS=Mycobacteriu... [more]
SERA_MYCBO2.863e-1233.59D-3-phosphoglycerate dehydrogenase OS=Mycobacteriu... [more]
GHRB_ERWT93.740e-1229.63Glyoxylate/hydroxypyruvate reductase B OS=Erwinia ... [more]
SERA_MYCLE8.331e-1232.82D-3-phosphoglycerate dehydrogenase OS=Mycobacteriu... [more]
GHRB_KLEP31.088e-1129.22Glyoxylate/hydroxypyruvate reductase B OS=Klebsiel... [more]
DHGY_HYPME1.856e-1131.08Glycerate dehydrogenase OS=Hyphomicrobium methylov... [more]
GHRB_KLEP72.424e-1128.77Glyoxylate/hydroxypyruvate reductase B OS=Klebsiel... [more]
Y1888_STAEQ4.135e-1127.89Putative 2-hydroxyacid dehydrogenase SERP1888 OS=S... [more]
GHRB_YERPY4.135e-1127.31Glyoxylate/hydroxypyruvate reductase B OS=Yersinia... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-104-E09-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY727702 ID=EY727702; Name=EY727702; organism=Citrus sinensis; type=EST; length=1039bp
CCACGCGTCCGATCATGGGCATGGCAAAGAAAAACAATCCCAAGACCTCC
CGAGAGTACTCCTGTTTAAGCCGCCACCGGACTTTCACCTCTTCGGAGAC
GAATGCTTTTCCTCAAACAAGTTCAAGTTCTTGAAGGCGTGGGAATCTCC
TCTCCCACTTGACCAATTCTTGAAAACACATGCACAGTCAGTCGAAGCCA
TTCTCTCATCGGGTGGCGCCCCGGTGACAGCCGAGACCTTGCGGCTGATG
CCGGCCGTTCGATTGGTGATGACCACGAGCGCCGGACTCAACCACGTCGA
CATCGCCGAGTGCCGACGCCGCGGCATCACTGTAGCTAATGCTGGAAACG
TTTTCTCCGAAGATGTTGCTGATTTGGCCGTGGGGTTGCTTATTGATTTG
TTAAGGAACATTTCTGCTTCTGATCGGTTTGTTAAACAATGGCTTCGGCC
TCGTCAAGCTGCTGAAGGGGACTGCTATTCTCTCGGCATCGGCAGTAAGC
TGGGAGGTAAGCGAGTTGGGATTGTTGGATTGGGAAGCATTGGCTCATTA
GTTGCTAAAAGACTAAATGCCTTTGGATGCTCCATATCATACAACTCAAG
GACAAAGAAACCCTCTGGCTCATACCCTTTCTATTCAAATGTCCGTGAAA
CTTGCAGCCTAACGGCAAATTCCTCATTATTTTGCTGGGGGATTAATTGC
TGAAACCCCCCCACAGGATCAATAAGCCAAGTCTTGGTCACCTCGGGGGG
AAAGGAAGGAAGGGGTAATAAAATTTTGGGGAGGGGGCCTTTTTATTTGA
AAAAAACGGAAACTGGGGGGGAAAGTTTTGGGGGGCAAGGGAAAAAATAA
AAGGGGGGGGCTGGGTTTGGGAAGGTGGTTTTTAAAAAAAAAAACCCCTA
GGACCTTTCCCCCAAAAAAAGATCTTTCCAAAACACTGGGGAAAATAAGG
GGGGTGTTTTTCTGGCCCCCCCCCCCCCCGCGGGGCCCCCCGTCTCTTTT
TTTTCATATTGTGGGGGGGAAAAATCATTTTTTCTCCAG
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