EY753980

Overview
NameEY753980
Unique NameEY753980
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length899
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753980 vs. ExPASy Swiss-Prot
Match: RL18_PYRAE (50S ribosomal protein L18P OS=Pyrobaculum aerophilum GN=rpl18p PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.653e-26
Identity = 80/232 (34.48%), Postives = 110/232 (47.41%), Query Frame = 2
Query:   95 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAI 790
            RY+V ++RRREG T+YR R +L+   K        R VVR TNK I AQI+ A   GD+ +  A    L ++G      N AAAY  GL++  +                             RR   A+LD+GL +   G RVF  LKG+LD GL IPH E+      +             I G HVA Y   L E+ PE Y++ F  Y++RG+E + L E +++V   I
Sbjct:    6 RYKVPFRRRREGLTNYRKRRKLLLSKKP-------RLVVRKTNKHIIAQIVVAKPQGDVTIVGADTRILAKFGWRGDENNVAAAYLLGLVVGYKA--------------------------RARRVEEAILDIGLHRPAPGARVFAVLKGALDAGLKIPHGEEVLPDEDR-------------IKGKHVAEYAEKLKEENPEAYKARFSRYLQRGLEPEKLPEHFEEVKKKI 191          
BLAST of EY753980 vs. ExPASy Swiss-Prot
Match: RL18_METTH (50S ribosomal protein L18P OS=Methanobacterium thermoautotrophicum GN=rpl18p PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.653e-26
Identity = 82/236 (34.75%), Postives = 119/236 (50.42%), Query Frame = 2
Query:   83 AYFKRYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAI 790
            A+  RY++ ++RRREGKTDYRAR +++        T K R VVR T   + AQII+  + GD  L SA++ +L + G   G +N AAAY TG L  +R LK        EG  E                  A+LD+GL     G++VF ALKG++D GL++PH E      S+             I G H+  Y  +L E+E  K    F +Y++RG+   +L E + ++   I
Sbjct:    2 AHGPRYKLAFRRRREGKTDYRARYKMVE-------TGKSRLVVRITTYHVIAQIINVGMNGDETLVSAHSKQLQKMGWLGGTSNTAAAYLTGYLCGKRALK--------EGIEE------------------AVLDIGLRPAIRGSKVFAALKGAVDAGLNVPHGESVLPDESR-------------IRGEHIMEYAESLDEEELRK---RFSKYLERGLSPVDLPEHFDEIKKRI 188          
BLAST of EY753980 vs. ExPASy Swiss-Prot
Match: RL18_PYRAR (50S ribosomal protein L18P OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=rpl18p PE=3 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.684e-26
Identity = 79/233 (33.91%), Postives = 114/233 (48.93%), Query Frame = 2
Query:   95 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIR 793
            RY+V ++RRREG T+YR R +L+   K        R VVR TNK I AQI+ A   GD  +A A    L ++G      N +AAY  GL++             Y+  +    E              A+LD+GL + T G RVF  LKG+LD GL IPH E+      +             I G H+A Y   L E+ P+ Y++ F  Y++RG+E + L + +++V  AI+
Sbjct:    6 RYKVPFRRRREGLTNYRKRRKLVISKKP-------RLVVRKTNKHIIAQIVVAKPIGDETVAGADTRILTKFGWRGDENNTSAAYLLGLVVG------------YKARMRGVEE--------------AILDIGLHRPTPGARVFAVLKGALDAGLKIPHGEEVLPSDER-------------IRGEHIAEYAAKLKEENPDAYKARFSRYLQRGLEPERLPDHFEEVRKAIQ 192          
BLAST of EY753980 vs. ExPASy Swiss-Prot
Match: RL18_THENV (50S ribosomal protein L18P OS=Thermoproteus neutrophilus (strain DSM 2338 / JCM 9278 / V24Sta) GN=rpl18p PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 8.206e-26
Identity = 80/232 (34.48%), Postives = 115/232 (49.57%), Query Frame = 2
Query:   95 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNL----EELYKKV 778
            RY+V ++RRREG T+YR R RLI   K        R VVR TNK I AQ++ A   GD+ +       L ++G      N +AAY  GL+            A Y+  +    E              A+LD+GL +   G+RVF  LKG+LD GL+IPH E+      +D +          + G HVA Y   L E+ PE Y++ F  Y++RG++ ++L    EE+ KK+
Sbjct:    6 RYKVPFRRRREGLTNYRKRRRLILSRKP-------RLVVRKTNKHIIAQVVVAKPQGDVTIVGVDTRALAKFGWRGDENNTSAAYLLGLV------------AGYKARLRGVRE--------------AVLDIGLHRPVAGSRVFAVLKGALDAGLEIPHGEE---VLPEDDR----------VSGKHVAEYAAKLKEENPELYKARFSRYLQRGVQPEDLPKHFEEVKKKI 191          
BLAST of EY753980 vs. ExPASy Swiss-Prot
Match: RL18_METJA (50S ribosomal protein L18P OS=Methanocaldococcus jannaschii GN=rpl18p PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.400e-25
Identity = 75/231 (32.47%), Postives = 114/231 (49.35%), Query Frame = 2
Query:   98 YQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAI 790
            Y+VK++RRRE KTDYR R++L+   K        R V R T     AQI+     GD  + SA++ EL + G +    N  +AY TG LL ++ L         +G  EA                  +LD+GL + T GN +F  LKG+LD G++IPH E+                  + I G H+ AY   L E + E+Y+  F +Y+++G+E + L E ++++ A I
Sbjct:    7 YRVKFRRRREAKTDYRKRLKLLLSRKP-------RLVARRTLNHCIAQIVLYDEKGDKTVVSAHSRELIKLGYKGHTGNLPSAYLTGYLLGKKALA--------KGYTEA------------------VLDIGLHRATKGNAIFAILKGALDAGMEIPHGEEILPS-------------EERIRGEHIKAYAEMLKEQDEERYKKQFSKYLEKGLEPEKLPEHFEEIKAKI 191          
BLAST of EY753980 vs. ExPASy Swiss-Prot
Match: RL18_CALMQ (50S ribosomal protein L18P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rpl18p PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.400e-25
Identity = 78/235 (33.19%), Postives = 121/235 (51.49%), Query Frame = 2
Query:   95 RYQVKYKRRREGKTD-YRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHEL-PRYGLEVGLTNYAAAYCTGLLLARRVL-KMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAI 790
            RY+VK++RRREGKTD Y+ RI +I        + K R VVRF+N+ + AQ+I ++  GD  +A A + EL  ++G   G  N  AAY  GLL+  R L K +++                           A+LDVGL + T G R+F  +KG++D GL++PH E             + +     + G H+A Y   L +  PE Y+  F +Y+ RG+E +N+ +  ++V + I
Sbjct:    6 RYKVKFRRRREGKTDYYKRRIMVI--------SGKPRLVVRFSNRYVLAQVIVSAPQGDFTVAEASSRELVKKFGWLGGTGNTPAAYLVGLLIGYRALSKGIKL---------------------------AVLDVGLHRVTKGGRLFAVVKGAVDAGLEVPHDE-------------EVQPSEDRLNGEHIAQYAADLKQSNPELYKIRFSKYLARGLEPENISKHIEEVKSKI 192          
BLAST of EY753980 vs. ExPASy Swiss-Prot
Match: RL18_METKA (50S ribosomal protein L18P OS=Methanopyrus kandleri GN=rpl18p PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 6.947e-25
Identity = 79/236 (33.47%), Postives = 118/236 (50.00%), Query Frame = 2
Query:   95 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELP-RYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEELYKKVHAAIRAD 799
            RY+V ++RRREGKT+Y  R  LI  D         R V R T     AQI+  +  GD+ LASA++ EL  ++G +    N  AAY TG L   R L         E  +E                 RA++D+GL +   G+RVF  LKG+LD G+DIPH E+      +             I G H+A   R + E++PE+Y+  F +Y++RG++ + L E +++V + I  +
Sbjct:    9 RYRVPFRRRREGKTNYYKRRELIKADAP-------RLVARKTLNHNIAQIVDFAPHGDVTLASAHSIELRNKFGWKGHCGNTPAAYLTGYLCGLRAL---------ERGIE-----------------RAVIDIGLHRPVRGSRVFAMLKGALDAGMDIPHGEEVLPPEDR-------------IRGEHIANLARQIKEEDPEEYERRFSKYLERGLKPEELPEHFEEVKSKIEEE 198          
BLAST of EY753980 vs. ExPASy Swiss-Prot
Match: RL18_PYRIL (50S ribosomal protein L18P OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=rpl18p PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.548e-24
Identity = 75/232 (32.33%), Postives = 111/232 (47.84%), Query Frame = 2
Query:   95 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNL----EELYKKV 778
            RY+V ++RRREG T+YR R +L+   K        R VVR TNK I AQ++ A   GD+ +       L ++G +    N  AAY  GL++             Y+  +    E              A+LD+GL +   G+RVF  LKG+LD GL+IPH E+      +             I G H+A Y   L ++ PE Y++ F  Y++RG+  + L    EE+ KK+
Sbjct:    6 RYKVPFRRRREGLTNYRKRRKLLLSKKP-------RLVVRKTNKHIIAQVVVAKPQGDVTIVGIDTRALAKFGWKGDENNTPAAYLLGLIVG------------YKARIRGVKE--------------AVLDIGLHRPVAGSRVFAVLKGALDAGLEIPHGEEIIPSDDR-------------ISGKHIAEYAEKLKKENPELYKTRFSRYLQRGLAPEELPTHFEEVKKKI 191          
BLAST of EY753980 vs. ExPASy Swiss-Prot
Match: RL18_METMP (50S ribosomal protein L18P OS=Methanococcus maripaludis GN=rpl18p PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.448e-24
Identity = 78/232 (33.62%), Postives = 120/232 (51.72%), Query Frame = 2
Query:   95 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNL----EELYKKV 778
            +++V ++RRREGKTD+R R+ L+   K        R V R +  ++TAQ+++    GD+VL SA++ EL + G +    N  AAY TGLLL  + +K                ED             A+LD GL + T G  +F  LKG+LD G+DIPH +K  A    D ++L+         G HV  Y  +L ED  + Y+  F +Y+++G+  ++L    EEL +K+
Sbjct:    6 KFRVPFRRRREGKTDFRQRLGLLLSGKP-------RLVARKSLNNVTAQLMAYDEKGDVVLVSAHSKELVKMGYKGHCGNLPAAYLTGLLLGAKAVK----------------EDVK----------EAVLDKGLHRATKGAAIFAVLKGALDAGMDIPHGDKIIA----DEERLN---------GTHVKNYAESLKED-ADAYKKQFSKYLEKGLNPEDLPEHVEELKEKI 190          
BLAST of EY753980 vs. ExPASy Swiss-Prot
Match: RL18_METM5 (50S ribosomal protein L18P OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=rpl18p PE=3 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 3.448e-24
Identity = 76/223 (34.08%), Postives = 115/223 (51.57%), Query Frame = 2
Query:   95 RYQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDITAQIISASIAGDIVLASAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPTENRRPFRALLDVGLVKTTTGNRVFGALKGSLDGGLDIPHSEKRFAGFSKDSKQLDAEVHRKYIYGGHVAAYMRTLMEDEPEKYQSHFCEYIKRGIEADNLEE 763
            +++V ++RRREGKTD+R R+ L+   K        R V R +  ++TAQ++S    GD+VL SA+  EL + G +    N  AAY TGLLL ++ +K        EG  E                  A+LD GL + T G  +F  LKG+LD G+DIPH +           ++ AE  R  + G HV  Y  +L ED  + Y+  F +Y+++G+  ++L E
Sbjct:    6 KFRVPFRRRREGKTDFRQRLGLLLSGKP-------RLVARKSLNNVTAQLMSYDEKGDVVLVSAHTKELVKMGYKGHCGNLPAAYLTGLLLGKKAVK--------EGAEE------------------AILDKGLHRATKGAAIFAVLKGALDAGMDIPHGD-----------EIIAEEER--LNGTHVKNYAESLKED-ADAYKKQFSKYLEKGLNPEDLPE 181          
The following BLAST results are available for this feature:
BLAST of EY753980 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 101
Match NameE-valueIdentityDescription
RL18_PYRAE1.653e-2634.4850S ribosomal protein L18P OS=Pyrobaculum aerophil... [more]
RL18_METTH1.653e-2634.7550S ribosomal protein L18P OS=Methanobacterium the... [more]
RL18_PYRAR3.684e-2633.9150S ribosomal protein L18P OS=Pyrobaculum arsenati... [more]
RL18_THENV8.206e-2634.4850S ribosomal protein L18P OS=Thermoproteus neutro... [more]
RL18_METJA1.400e-2532.4750S ribosomal protein L18P OS=Methanocaldococcus j... [more]
RL18_CALMQ1.400e-2533.1950S ribosomal protein L18P OS=Caldivirga maquiling... [more]
RL18_METKA6.947e-2533.4750S ribosomal protein L18P OS=Methanopyrus kandler... [more]
RL18_PYRIL1.548e-2432.3350S ribosomal protein L18P OS=Pyrobaculum islandic... [more]
RL18_METMP3.448e-2433.6250S ribosomal protein L18P OS=Methanococcus maripa... [more]
RL18_METM53.448e-2434.0850S ribosomal protein L18P OS=Methanococcus maripa... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-009-B08-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753980 ID=EY753980; Name=EY753980; organism=Citrus sinensis; type=EST; length=899bp
GGCGGNAATCCAAAATCTGACCCACGCGTCCGCTACACTTTGTTCTTCAG
CAATGGCCTTTGCCAAACCCCAAAAGTCAAAAGCTTACTTTAAGCGATAT
CAAGTTAAGTACAAGAGAAGGCGAGAGGGAAAGACTGACTATCGGGCTAG
GATTCGCCTGATCAACCAAGATAAAAACAAGTACAACACGCCAAAGTATC
GGTTTGTTGTGCGATTCACCAACAAAGACATCACTGCACAAATTATATCT
GCCAGCATAGCCGGGGATATAGTCCTTGCATCTGCTTATGCCCATGAGCT
TCCCCGTTATGGTCTTGAGGTGGGCCTCACTAATTATGCAGCAGCTTATT
GCACTGGACTCCTCTTGGCCCGCCGAGTCCTGAAAATGCTTGAGATGGAT
GCTGAGTATGAGGGGAACGTTGAGGCAACAGGAGAGGACTATTCAGTTGA
GCCAACTGAGAACAGGAGGCCTTTCCGTGCCCTGCTCGATGTTGGTCTTG
TGAAAACAACTACTGGTAACCGTGTCTTTGGCGCTCTTAAGGGTTCATTG
GATGGTGGACTTGATATCCCTCACAGTGAGAAGAGATTTGCTGGATTCAG
TAAGGATAGTAAGCAACTTGATGCTGAAGTTCACCGTAAATACATCTATG
GTGGTCATGTTGCTGCCTACATGAGGACTTTGATGGAAGATGAGCCAGAG
AAGTACCAGTCTCACTTTTGTGAATACATCAAGAGAGGTATTGAGGCTGA
TAACCTTGAAGAGTTGTACAAGAAGGTACATGCTGCCATCCGTGCAGACC
CTAACCAGAAGAAATCTGAGAAGAGCCTTCAGCAGAACACAAGAGGTACA
ACCTGAAGAAACTTACGTATGAGGAAAGGAAAGCCAGGTTAGTTGAAAG
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