EY753958

Overview
NameEY753958
Unique NameEY753958
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length872
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY753958 vs. ExPASy Swiss-Prot
Match: YEIA_ECOLI (Uncharacterized protein yeiA OS=Escherichia coli (strain K12) GN=yeiA PE=3 SV=3)

HSP 1 Score: 127.872 bits (320), Expect = 7.540e-29
Identity = 74/165 (44.85%), Postives = 97/165 (58.79%), Query Frame = 1 
Query:  238 DLSITVNGLQMPNPFVIGSGPPGTNYTVMKRAFDEGWGAVVAKTVSLDAAKVINVTPRYARLRAGANGSAKGQIIGWENIELISDRPLETMLKEFKQLKALYPDRILIASIMEEYNKAAWEELIDRVEETGIDAIEVNFSCPHGMPGRKMGAAXGQXCXLLEESC 732
            DLSIT  G++ PNPF + S P G  Y +  +A+D GWG VV KT+    A    V+PR+  L     G      IG++N+E I++ PLE  L   ++LK  YPD++LIASIM E N+  WEEL   V+E G D IE NFSCP  M    MG+  GQ   L+E+ C
Sbjct:    5 DLSITFCGVKFPNPFCLSSSPVGNCYEMCAKAYDTGWGGVVFKTIGFFIAN--EVSPRFDHLVKEDTG-----FIGFKNMEQIAEHPLEENLAALRRLKEDYPDKVLIASIMGE-NEQQWEELARLVQEAGADMIECNFSCPQ-MTSHAMGSDVGQSPELVEKYC 160
The following BLAST results are available for this feature:
BLAST of EY753958 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
YEIA_ECOLI7.540e-2944.85Uncharacterized protein yeiA OS=Escherichia coli (... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS12-C1-001-008-H05-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753958 ID=EY753958; Name=EY753958; organism=Citrus sinensis; type=EST; length=872bp
AAATTATTATTAAGTCGAATTCATAAAGCTTCTCTCTGATCCCAAAAGAA
TCTTTAGAACTGAGTGAGATTCAATCTTGTTCATTTCCTTTTATCTCCAT
CCATGGCATCATTGAATTTGAATCAGATCATAAGCAACAGCAACACCTCC
TTTGCTGTGAATCGTCGGCCAGGATTGCGCTTGCCTAGTCGAATTGGGTT
GAGGGTTTTGGCTTCTGCTTCAGCTTCAGCAGAGCCAGACTTGAGTATTA
CAGTAAATGGACTGCAGATGCCGAACCCGTTTGTTATCGGATCGGGTCCA
CCTGGCACCAACTACACTGTCATGAAGCGAGCCTTTGATGAAGGCTGGGG
TGCTGTTGTTGCTAAAACTGTATCATTAGATGCAGCAAAAGTTATAAACG
TAACTCCTCGATATGCCCGCCTGCGAGCAGGTGCGAATGGATCAGCCAAA
GGGCAAATTATTGGGTGGGAGAACATAGAACTCATTAGCGATCGGCCGCT
TGAAACAATGTTGAAAGAATTTAAACAATTAAAAGCATTGTATCCGGATA
GGATTCTCATTGCTTCAATTATGGAAGAGTATAACAAAGCTGCATGGGAG
GAGCTTATTGATCGAGTGGAAGAAACAGGAATTGATGCAATAGAAGTTAA
TTTTTCATGTCCCCATGGCATGCCCGGACGTAAAATGGGGGCTGCTGNTG
GCCAANATTGTANGCTATTGGAAGAAAGTTGTGGTTGGATAAATGCAAAG
CTACTGTTCCTGTGTGGGGCAAGAGACTNCTAACATACTGACATTACAGA
GTGAGCTCTGCGTATGATGAAACTTGTGTTGACTTCTACTTTAGTTCAAA
TAGGTAGCNTTATTTGAAACTT
back to top