EY753894

Overview
NameEY753894
Unique NameEY753894
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY753894 vs. ExPASy Swiss-Prot
Match: GPWA_PSEWI (Glutathione peroxidase OS=Pseudomonas wisconsinensis GN=gpwA PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.614e-13
Identity = 44/139 (31.65%), Postives = 70/139 (50.36%), Query Frame = 2 
Query:  308 GKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTXFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKVLVDKNGKVIERYPPTTSPXQIE 724
            G+++ L ++ GK L++VN AS CG TP  +  L  LY++YK Q  E+L  P + F  QE   + E        +   F + +   V+G N  P+++ L   +        +WNF K +VD+ GKV+  +   T P   E
Sbjct:   39 GENIELCQYAGKPLVVVNTASFCGFTP-QFKGLEALYQRYKDQELEVLGVPSDDF-RQESADSKETATVCYVNYGVTFAMTEPQPVSGANAIPLFKGLAEQS-----RQPRWNFFKYVVDRQGKVVASFSSLTKPDDPE 170
The following BLAST results are available for this feature:
BLAST of EY753894 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
GPWA_PSEWI1.614e-1331.65Glutathione peroxidase OS=Pseudomonas wisconsinens... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-008-B07-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753894 ID=EY753894; Name=EY753894; organism=Citrus sinensis; type=EST; length=901bp
CTTAAATTCTATCTCAATGGCTTCTTATTCGATGCCTTTCTCTGCAGCTT
TCTCCTCACCTTTACGGCATTTCACACAAATCAAAACATGCCCTGCTGCA
TGGGCTTCATCAATGGCGGCTTCATGGACTCCTACTAATTCAATCAAATC
ATCAATTGGGTCCGCTAAACCAGGCTTTCTTCAACATGGGCTGTTTTCCC
AATCTTCAAATTTGCCTGGGTTTTTCGTGAAACGTCGTTCCTTTGGTGTT
CACGCTACAGCTGCTACTGAGAAGTCTTTATATGACTTCACCGTCAAGGA
TATTGATGGTAAAGATGTTCCTCTTAGCAAGTTTAAGGGCAAAGTTCTGT
TGATTGTGAATGTCGCTTCAAGATGTGGCTTGACACCATCTAATTACTCG
GAGCTCTCTCACTTATATGAGAAGTACAAGACTCAAGGATTTGAGATTCT
AGCTTTCCCTTGCAATCAATTTGGTGGGCAAGAGCCTGGATCAAACCCTG
AGATCAAGGAATTCGCTTGTACTANGTTTAAGGCAGAATTTCCCATATTT
GACAAGGTTGATGTAAATGGACCAAACACAGCTCCAGTTTACCAGTTTTT
GAAGTCAAGTGCTGGGGGATTTTTAGGCGACCTTGTCAAGTGGAACTTTG
AGAAAGTCTTAGTGGACAAAAATGGTAAAGTCATCGAGAGATATCCACCA
ACTACCTCGCCTTTNCAAATTGAGAAGGACATNCANAAGCTTGTTGTGCC
ATGAATCTTGACTTGAGCTGCTTGGCCATGTCTCANATGTATCGACGAGA
TAGAAACTGAATTATGTATTATGATATTTCTGAAACGGGCATACATAGAT
GAATTTTCCTGCCTCCCTGAAAGTTATAGGTTTTTAAATCCTAAATTAAA
A
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