EY753894

Overview
NameEY753894
Unique NameEY753894
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753894 vs. ExPASy Swiss-Prot
Match: GPX4_CEBAP (Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Cebus apella GN=GPX4 PE=2 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 1.039e-36
Identity = 76/154 (49.35%), Postives = 104/154 (67.53%), Query Frame = 2
Query:  275 SLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTXFKAEFPIFDKVDVNGPNTAPVYQFLK--SSAGGFLGDLVKWNFEKVLVDKNGKVIERYPPTTSPXQIEKD 730
            S+++F+ KDIDG  V L K++G V ++ NVAS+ G T  NY++L  L+ +Y   G  ILAFPCNQFG QEPGSN EIKEFA   +  +F +F K+ VNG +  P+++++K      G LG+ +KWNF K L+DKNG V++RY P   P  IEKD
Sbjct:   40 SMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQUGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGKQEPGSNEEIKEFA-AGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPQVIEKD 192          
BLAST of EY753894 vs. ExPASy Swiss-Prot
Match: GPX4_PIG (Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Sus scrofa GN=GPX4 PE=1 SV=3)

HSP 1 Score: 153.295 bits (386), Expect = 1.772e-36
Identity = 75/155 (48.39%), Postives = 105/155 (67.74%), Query Frame = 2
Query:  272 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTXFKAEFPIFDKVDVNGPNTAPVYQFLK--SSAGGFLGDLVKWNFEKVLVDKNGKVIERYPPTTSPXQIEKD 730
            +S+++F+ KDIDG  V L K++G V ++ NVAS+ G T  NY++L  L+ +Y   G  ILAFPCNQFG QEPGS+ EIKEFA   +  +F +F K+ VNG +  P+++++K      G LG+ +KWNF K L+DKNG V++RY P   P  IEKD
Sbjct:   39 RSMHEFSAKDIDGHMVNLDKYRGYVCIVTNVASQUGKTEVNYTQLVDLHARYAECGLRILAFPCNQFGRQEPGSDAEIKEFA-AGYNVKFDMFSKICVNGDDAHPLWKWMKVQPKGRGMLGNAIKWNFTKFLIDKNGCVVKRYGPMEEPQVIEKD 192          
BLAST of EY753894 vs. ExPASy Swiss-Prot
Match: GPX41_MOUSE (Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Mus musculus GN=Gpx4 PE=1 SV=4)

HSP 1 Score: 153.295 bits (386), Expect = 1.772e-36
Identity = 75/155 (48.39%), Postives = 105/155 (67.74%), Query Frame = 2
Query:  272 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTXFKAEFPIFDKVDVNGPNTAPVYQFLK--SSAGGFLGDLVKWNFEKVLVDKNGKVIERYPPTTSPXQIEKD 730
            +S+++F+ KDIDG  V L K++G V ++ NVAS+ G T  NY++L  L+ +Y   G  ILAFPCNQFG QEPGSN EIKEFA   +  +F ++ K+ VNG +  P+++++K      G LG+ +KWNF K L+DKNG V++RY P   P  IEKD
Sbjct:   39 RSMHEFSAKDIDGHMVCLDKYRGFVCIVTNVASQUGKTDVNYTQLVDLHARYAECGLRILAFPCNQFGRQEPGSNQEIKEFA-AGYNVKFDMYSKICVNGDDAHPLWKWMKVQPKGRGMLGNAIKWNFTKFLIDKNGCVVKRYGPMEEPQVIEKD 192          
BLAST of EY753894 vs. ExPASy Swiss-Prot
Match: GPX4_MACFU (Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Macaca fuscata fuscata GN=GPX4 PE=2 SV=2)

HSP 1 Score: 152.91 bits (385), Expect = 2.314e-36
Identity = 75/155 (48.39%), Postives = 105/155 (67.74%), Query Frame = 2
Query:  272 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTXFKAEFPIFDKVDVNGPNTAPVYQFLK--SSAGGFLGDLVKWNFEKVLVDKNGKVIERYPPTTSPXQIEKD 730
            +S+++F+ KDIDG  V L K++G V ++ NVAS+ G T  NY++L  L+ +Y   G  ILAFPCNQFG QEPGSN +IKEFA   +  +F +F K+ VNG +  P+++++K      G LG+ +KWNF K L+DKNG V++RY P   P  IEKD
Sbjct:   39 RSMHEFSAKDIDGHMVNLDKYRGFVCIVTNVASQUGKTEVNYTQLVDLHARYAECGVRILAFPCNQFGKQEPGSNEKIKEFA-AGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLIDKNGCVVKRYGPMEEPLVIEKD 192          
BLAST of EY753894 vs. ExPASy Swiss-Prot
Match: GPX42_RAT (Phospholipid hydroperoxide glutathione peroxidase, nuclear OS=Rattus norvegicus GN=Gpx4 PE=2 SV=3)

HSP 1 Score: 152.525 bits (384), Expect = 3.023e-36
Identity = 75/155 (48.39%), Postives = 103/155 (66.45%), Query Frame = 2
Query:  272 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTXFKAEFPIFDKVDVNGPNTAPVYQFLK--SSAGGFLGDLVKWNFEKVLVDKNGKVIERYPPTTSPXQIEKD 730
            +S+++F  KDIDG  V L K++G V ++ NVAS+ G T  NY++L  L+ +Y   G  ILAFPCNQFG QEPGSN EIKEFA   +   F ++ K+ VNG +  P+++++K      G LG+ +KWNF K L+DKNG V++RY P   P  IEKD
Sbjct:   95 RSMHEFAAKDIDGHMVCLDKYRGCVCIVTNVASQUGKTDVNYTQLVDLHARYAECGLRILAFPCNQFGRQEPGSNQEIKEFA-AGYNVRFDMYSKICVNGDDAHPLWKWMKVQPKGRGMLGNAIKWNFTKFLIDKNGCVVKRYGPMEEPQVIEKD 248          
BLAST of EY753894 vs. ExPASy Swiss-Prot
Match: GPX41_RAT (Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Rattus norvegicus GN=Gpx4 PE=1 SV=3)

HSP 1 Score: 152.525 bits (384), Expect = 3.023e-36
Identity = 75/155 (48.39%), Postives = 103/155 (66.45%), Query Frame = 2
Query:  272 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTXFKAEFPIFDKVDVNGPNTAPVYQFLK--SSAGGFLGDLVKWNFEKVLVDKNGKVIERYPPTTSPXQIEKD 730
            +S+++F  KDIDG  V L K++G V ++ NVAS+ G T  NY++L  L+ +Y   G  ILAFPCNQFG QEPGSN EIKEFA   +   F ++ K+ VNG +  P+++++K      G LG+ +KWNF K L+DKNG V++RY P   P  IEKD
Sbjct:   39 RSMHEFAAKDIDGHMVCLDKYRGCVCIVTNVASQUGKTDVNYTQLVDLHARYAECGLRILAFPCNQFGRQEPGSNQEIKEFA-AGYNVRFDMYSKICVNGDDAHPLWKWMKVQPKGRGMLGNAIKWNFTKFLIDKNGCVVKRYGPMEEPQVIEKD 192          
BLAST of EY753894 vs. ExPASy Swiss-Prot
Match: GPXA_NEIMF (Glutathione peroxidase homolog OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=gpxA PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 6.734e-36
Identity = 82/177 (46.33%), Postives = 108/177 (61.02%), Query Frame = 2
Query:  278 LYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTXFKAEFPIFDKVDVNGPNTAPVYQFLKS----SAGGFL-----------------GDLVKWNFEKVLVDKNGKVIERYPPTTSPXQIEKDXXKLV 745
            +YDF +KD +G  V LS ++GKVLLIVN A+RCGLTP  Y  L  LY +Y  +G EIL FPCNQF  Q P S+ EI +     F  +F IFDK++VNG NTAP+Y +LKS      G  L                 GD +KWNF K LV+++G+V+ER+ P+ +P +IE D   L+
Sbjct:    3 IYDFQMKDAEGNAVDLSGYRGKVLLIVNTATRCGLTPQ-YEALQKLYAQYTAEGLEILDFPCNQFREQAPESSGEIAQVCMMKFGTKFKIFDKIEVNGANTAPLYAYLKSVKPQDKGNHLFKDFVLKLAALGEKRDEGD-IKWNFTKFLVNRDGEVVERFAPSVTPEEIEADIRALL 177          
BLAST of EY753894 vs. ExPASy Swiss-Prot
Match: GPXA_NEIMC (Glutathione peroxidase homolog OS=Neisseria meningitidis serogroup C GN=gpxA PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 6.734e-36
Identity = 82/177 (46.33%), Postives = 108/177 (61.02%), Query Frame = 2
Query:  278 LYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTXFKAEFPIFDKVDVNGPNTAPVYQFLKS----SAGGFL-----------------GDLVKWNFEKVLVDKNGKVIERYPPTTSPXQIEKDXXKLV 745
            +YDF +KD +G  V LS ++GKVLLIVN A+RCGLTP  Y  L  LY +Y  +G EIL FPCNQF  Q P S+ EI +     F  +F IFDK++VNG NTAP+Y +LKS      G  L                 GD +KWNF K LV+++G+V+ER+ P+ +P +IE D   L+
Sbjct:    3 IYDFQMKDAEGNAVDLSGYRGKVLLIVNTATRCGLTPQ-YEALQKLYAQYTAEGLEILDFPCNQFREQAPESSGEIAQVCMMKFGTKFKIFDKIEVNGANTAPLYAYLKSVKPQDKGNHLFKDFVLKLAALGEKRDEGD-IKWNFTKFLVNRDGEVVERFAPSVTPEEIEADIRALL 177          
BLAST of EY753894 vs. ExPASy Swiss-Prot
Match: GPXA_NEIMB (Glutathione peroxidase homolog OS=Neisseria meningitidis serogroup B GN=gpxA PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 6.734e-36
Identity = 82/177 (46.33%), Postives = 108/177 (61.02%), Query Frame = 2
Query:  278 LYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTXFKAEFPIFDKVDVNGPNTAPVYQFLKS----SAGGFL-----------------GDLVKWNFEKVLVDKNGKVIERYPPTTSPXQIEKDXXKLV 745
            +YDF +KD +G  V LS ++GKVLLIVN A+RCGLTP  Y  L  LY +Y  +G EIL FPCNQF  Q P S+ EI +     F  +F IFDK++VNG NTAP+Y +LKS      G  L                 GD +KWNF K LV+++G+V+ER+ P+ +P +IE D   L+
Sbjct:    3 IYDFQMKDAEGNAVDLSGYRGKVLLIVNTATRCGLTPQ-YEALQKLYAQYTAEGLEILDFPCNQFREQAPESSGEIAQVCMMKFGTKFKIFDKIEVNGANTAPLYAYLKSVKPQDKGNHLFKDFVLKLAALGEKRDEGD-IKWNFTKFLVNRDGEVVERFAPSVTPEEIEADIRALL 177          
BLAST of EY753894 vs. ExPASy Swiss-Prot
Match: GPXA_NEIMA (Glutathione peroxidase homolog OS=Neisseria meningitidis serogroup A GN=gpxA PE=3 SV=1)

HSP 1 Score: 151.369 bits (381), Expect = 6.734e-36
Identity = 82/177 (46.33%), Postives = 108/177 (61.02%), Query Frame = 2
Query:  278 LYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTXFKAEFPIFDKVDVNGPNTAPVYQFLKS----SAGGFL-----------------GDLVKWNFEKVLVDKNGKVIERYPPTTSPXQIEKDXXKLV 745
            +YDF +KD +G  V LS ++GKVLLIVN A+RCGLTP  Y  L  LY +Y  +G EIL FPCNQF  Q P S+ EI +     F  +F IFDK++VNG NTAP+Y +LKS      G  L                 GD +KWNF K LV+++G+V+ER+ P+ +P +IE D   L+
Sbjct:    3 IYDFQMKDAEGNAVDLSGYRGKVLLIVNTATRCGLTPQ-YEALQKLYAQYTAEGLEILDFPCNQFREQAPESSGEIAQVCMMKFGTKFKIFDKIEVNGANTAPLYAYLKSVKPQDKGNHLFKDFVLKLAALGEKRDEGD-IKWNFTKFLVNRDGEVVERFAPSVTPEEIEADIRALL 177          
The following BLAST results are available for this feature:
BLAST of EY753894 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
GPX4_CEBAP1.039e-3649.35Phospholipid hydroperoxide glutathione peroxidase,... [more]
GPX4_PIG1.772e-3648.39Phospholipid hydroperoxide glutathione peroxidase,... [more]
GPX41_MOUSE1.772e-3648.39Phospholipid hydroperoxide glutathione peroxidase,... [more]
GPX4_MACFU2.314e-3648.39Phospholipid hydroperoxide glutathione peroxidase,... [more]
GPX42_RAT3.023e-3648.39Phospholipid hydroperoxide glutathione peroxidase,... [more]
GPX41_RAT3.023e-3648.39Phospholipid hydroperoxide glutathione peroxidase,... [more]
GPXA_NEIMF6.734e-3646.33Glutathione peroxidase homolog OS=Neisseria mening... [more]
GPXA_NEIMC6.734e-3646.33Glutathione peroxidase homolog OS=Neisseria mening... [more]
GPXA_NEIMB6.734e-3646.33Glutathione peroxidase homolog OS=Neisseria mening... [more]
GPXA_NEIMA6.734e-3646.33Glutathione peroxidase homolog OS=Neisseria mening... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS12-C1-001-008-B07-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753894 ID=EY753894; Name=EY753894; organism=Citrus sinensis; type=EST; length=901bp
CTTAAATTCTATCTCAATGGCTTCTTATTCGATGCCTTTCTCTGCAGCTT
TCTCCTCACCTTTACGGCATTTCACACAAATCAAAACATGCCCTGCTGCA
TGGGCTTCATCAATGGCGGCTTCATGGACTCCTACTAATTCAATCAAATC
ATCAATTGGGTCCGCTAAACCAGGCTTTCTTCAACATGGGCTGTTTTCCC
AATCTTCAAATTTGCCTGGGTTTTTCGTGAAACGTCGTTCCTTTGGTGTT
CACGCTACAGCTGCTACTGAGAAGTCTTTATATGACTTCACCGTCAAGGA
TATTGATGGTAAAGATGTTCCTCTTAGCAAGTTTAAGGGCAAAGTTCTGT
TGATTGTGAATGTCGCTTCAAGATGTGGCTTGACACCATCTAATTACTCG
GAGCTCTCTCACTTATATGAGAAGTACAAGACTCAAGGATTTGAGATTCT
AGCTTTCCCTTGCAATCAATTTGGTGGGCAAGAGCCTGGATCAAACCCTG
AGATCAAGGAATTCGCTTGTACTANGTTTAAGGCAGAATTTCCCATATTT
GACAAGGTTGATGTAAATGGACCAAACACAGCTCCAGTTTACCAGTTTTT
GAAGTCAAGTGCTGGGGGATTTTTAGGCGACCTTGTCAAGTGGAACTTTG
AGAAAGTCTTAGTGGACAAAAATGGTAAAGTCATCGAGAGATATCCACCA
ACTACCTCGCCTTTNCAAATTGAGAAGGACATNCANAAGCTTGTTGTGCC
ATGAATCTTGACTTGAGCTGCTTGGCCATGTCTCANATGTATCGACGAGA
TAGAAACTGAATTATGTATTATGATATTTCTGAAACGGGCATACATAGAT
GAATTTTCCTGCCTCCCTGAAAGTTATAGGTTTTTAAATCCTAAATTAAA
A
back to top