EY753894

Overview
NameEY753894
Unique NameEY753894
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length901
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13571 contig Csv1_Contig13571:72..971. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753894 vs. ExPASy Swiss-Prot
Match: GPX42_MOUSE (Phospholipid hydroperoxide glutathione peroxidase, nuclear OS=Mus musculus GN=Gpx4 PE=2 SV=3)

HSP 1 Score: 149.828 bits (377), Expect = 1.959e-35
Identity = 73/155 (47.10%), Postives = 104/155 (67.10%), Query Frame = 2
Query:  272 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTXFKAEFPIFDKVDVNGPNTAPVYQFLK--SSAGGFLGDLVKWNFEKVLVDKNGKVIERYPPTTSPXQIEKD 730
            +S+++F+ KDIDG  V L K++G V ++ NVAS+ G T  NY++L  L+ +Y   G  ILAFPCNQFG QEPGSN EIKEFA   +  +F ++ K+ VNG +  P+++++K      G LG+ +KWNF K L+DKNG  ++RY P   P  IE+D
Sbjct:   95 RSMHEFSAKDIDGHMVCLDKYRGFVCIVTNVASQUGKTDVNYTQLVDLHARYAECGLRILAFPCNQFGRQEPGSNQEIKEFA-AGYNVKFDMYSKICVNGDDAHPLWKWMKVQPKGRGMLGNAIKWNFTKFLIDKNGCEVKRYGPMEEPQVIERD 248          
BLAST of EY753894 vs. ExPASy Swiss-Prot
Match: GPX4_HYLLA (Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Hylobates lar GN=GPX4 PE=2 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 1.659e-34
Identity = 72/154 (46.75%), Postives = 101/154 (65.58%), Query Frame = 2
Query:  275 SLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTXFKAEFPIFDKVDVNGPNTAPVYQFLK--SSAGGFLGDLVKWNFEKVLVDKNGKVIERYPPTTSPXQIEKD 730
            S+++F+ K +DG  V L K++G V ++ NVAS+ G T  NY++L  L+ +Y   G   LAFPCNQFG QEPGSN EIKEFA   +  +F +F K+ VNG +  P+++++K      G LG+ +KWNF K L DKNG V++RY P   P  +EKD
Sbjct:   40 SMHEFSAKVLDGHTVNLDKYRGFVCIVTNVASQUGKTEVNYTQLVDLHARYAECGLRFLAFPCNQFGKQEPGSNEEIKEFA-AGYNVKFDMFSKICVNGDDAHPLWKWMKIQPKGKGILGNAIKWNFTKFLFDKNGCVVKRYGPMEEPLVLEKD 192          
BLAST of EY753894 vs. ExPASy Swiss-Prot
Match: GPX1_YEAST (Glutathione peroxidase 1 OS=Saccharomyces cerevisiae GN=GPX1 PE=1 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 6.969e-33
Identity = 70/151 (46.36%), Postives = 94/151 (62.25%), Query Frame = 2
Query:  272 KSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTXFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLG-DLVKWNFEKVLVDKNGKVIERYPPTTSPXQI 721
            +  Y F+  D +G   P +  + KV+LIVNVAS C  TP  Y EL +LYEKYK+ G  I+AFPC QFG QE   + EI +F    +   FPI  K+  NG    PVY+FLK+S  G  G  ++KWNFEK +VD+NGKV++R+   T P ++
Sbjct:    2 QEFYSFSPIDENGNPFPFNSLRNKVVLIVNVASHCAFTPQ-YKELEYLYEKYKSHGLVIVAFPCGQFGNQEFEKDKEINKFCQDKYGVTFPILHKIRCNGQKQDPVYKFLKNSVSGKSGIKMIKWNFEKFVVDRNGKVVKRFSCMTRPLEL 151          
BLAST of EY753894 vs. ExPASy Swiss-Prot
Match: GPX1_CHLRE (Glutathione peroxidase 1, mitochondrial OS=Chlamydomonas reinhardtii GN=GPX PE=1 SV=2)

HSP 1 Score: 139.813 bits (351), Expect = 2.028e-32
Identity = 78/169 (46.15%), Postives = 100/169 (59.17%), Query Frame = 2
Query:  245 GVHATAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACT--XFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKVLVDKNGKVIERYPPTTSPXQIEKDXXKLV 745
            G   T++T  + +  +  DID K+V       +V+L+VNVAS+ GLT +NY E + L  KY      I+AFPCNQFGGQEPG+N EIK FA       A   + DKVDVNG N +PVY FLK +AG      + WNF K LV  +G V  RY PTT P  +EK   +L+
Sbjct:   33 GSKPTSSTS-NFHQLSALDIDKKNVDFKSLNNRVVLVVNVASKUGLTAANYKEFATLLGKYPATDLTIVAFPCNQFGGQEPGTNAEIKAFASARGFSGAGALLMDKVDVNGANASPVYNFLKVAAGDTSD--IGWNFGKFLVRPDGTVFGRYAPTTGPLSLEKYIVELI 198          
BLAST of EY753894 vs. ExPASy Swiss-Prot
Match: BTUE_ECOLI (Vitamin B12 transport periplasmic protein btuE OS=Escherichia coli (strain K12) GN=btuE PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.928e-31
Identity = 74/168 (44.05%), Postives = 100/168 (59.52%), Query Frame = 2
Query:  269 EKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTXFKAEFPIFDKVDVNGPNTAPVYQFLKSSA--------GGFLGDLVK------------WNFEKVLVDKNGKVIERYPPTTSP 712
            + S+    VKDIDG+   L KF G VLLIVNVAS+CGLTP  Y +L ++ + +  +GF +L FPCNQF  QEPGS+ EIK +  T +   FP+F K++VNG    P+YQ L ++A         GF   +V             WNFEK LV ++GKVI+R+ P  +P
Sbjct:    2 QDSILTTVVKDIDGEVTTLEKFAGNVLLIVNVASKCGLTPQ-YEQLENIQKAWVDRGFMVLGFPCNQFLEQEPGSDEEIKTYCTTTWGVTFPMFSKIEVNGEGRHPLYQKLIAAAPTAVAPEESGFYARMVSKGRAPLYPDDILWNFEKFLVGRDGKVIQRFSPDMTP 168          
BLAST of EY753894 vs. ExPASy Swiss-Prot
Match: BSAA_STAEQ (Glutathione peroxidase homolog bsaA OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=bsaA PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 8.519e-31
Identity = 65/151 (43.05%), Postives = 91/151 (60.26%), Query Frame = 2
Query:  275 SLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTXFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKVLVDKNGKVIERYPPTTSPXQIEK 727
            S+YD  V++ DG    L ++KGKVL+IVN A+ C L    +++L  LY+KY   G EIL+FPCN F  QEPG   +I       F   FPI  K++VNG +  P+Y  LK    G  G  +KWNF K +VD+ G +++R+ P  +P Q+EK
Sbjct:    2 SIYDIAVENYDGSTYLLKRYKGKVLIIVNTATNCTLN-DQFNKLEMLYKKYHKYGLEILSFPCNDFNNQEPGLIKDIYRVYKYKFGITFPIHAKINVNGEHEHPLYTLLKCKQPGLFGSQIKWNFTKFVVDQQGNIVKRFLPCDNPNQMEK 151          
BLAST of EY753894 vs. ExPASy Swiss-Prot
Match: GPX7_MOUSE (Glutathione peroxidase 7 OS=Mus musculus GN=Gpx7 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 7.211e-30
Identity = 70/169 (41.42%), Postives = 94/169 (55.62%), Query Frame = 2
Query:  254 ATAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTXFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKVLVDKNGKVIERYPPTTSPXQIEKDXXKLVVP*IL 760
            A A +E+  YDF   +I GK V L K++G V L+VNVAS CG T  NY  L  L        F +LAFPCNQFG QEP +N EI+ FA   +   FP+F K+ V G    P +++L  ++    G    WNF K LVD +GKV+  + PT    +I+    + V+  IL
Sbjct:   16 ACAQSEQDFYDFKAVNIRGKLVSLEKYRGSVSLVVNVASECGFTDQNYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDTNREIENFARRTYSVSFPMFSKIAVTGTGAHPAFKYLTQTS----GKEPTWNFWKYLVDPDGKVVGAWDPTVPVAEIKPRITEQVMKLIL 180          
BLAST of EY753894 vs. ExPASy Swiss-Prot
Match: GPX7_BOVIN (Glutathione peroxidase 7 OS=Bos taurus GN=GPX7 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.098e-29
Identity = 70/164 (42.68%), Postives = 89/164 (54.27%), Query Frame = 2
Query:  254 ATAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTXFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKVLVDKNGKVIERYPPTTSPXQIEKDXXKLV 745
            A A  E+  YDF   +I GK V L K++G V L+VNVAS CG T  +Y  L  L        F +LAFPCNQFG QEP SN EI+ FA   +   FP+F K+ V G    P +++L  ++    G    WNF K LV  +GKVI  + PT S  +I      LV
Sbjct:   16 ACAPREQDFYDFKAVNIRGKLVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVTGTGAHPAFKYLTETS----GKEPTWNFWKYLVAPDGKVIGAWDPTVSVEEIRPQITALV 175          
BLAST of EY753894 vs. ExPASy Swiss-Prot
Match: GPX7_HUMAN (Glutathione peroxidase 7 OS=Homo sapiens GN=GPX7 PE=1 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 3.579e-29
Identity = 68/164 (41.46%), Postives = 89/164 (54.27%), Query Frame = 2
Query:  254 ATAATEKSLYDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTXFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKVLVDKNGKVIERYPPTTSPXQIEKDXXKLV 745
            A A  E+  YDF   +I GK V L K++G V L+VNVAS CG T  +Y  L  L        F +LAFPCNQFG QEP SN EI+ FA   +   FP+F K+ V G    P +++L  ++    G    WNF K LV  +GKV+  + PT S  ++      LV
Sbjct:   17 ACAQQEQDFYDFKAVNIRGKLVSLEKYRGSVSLVVNVASECGFTDQHYRALQQLQRDLGPHHFNVLAFPCNQFGQQEPDSNKEIESFARRTYSVSFPMFSKIAVTGTGAHPAFKYLAQTS----GKEPTWNFWKYLVAPDGKVVGAWDPTVSVEEVRPQITALV 176          
BLAST of EY753894 vs. ExPASy Swiss-Prot
Match: GPX8B_XENLA (Probable glutathione peroxidase 8-B OS=Xenopus laevis GN=gpx8-B PE=2 SV=1)

HSP 1 Score: 122.094 bits (305), Expect = 4.375e-27
Identity = 62/155 (40.00%), Postives = 86/155 (55.48%), Query Frame = 2
Query:  281 YDFTVKDIDGKDVPLSKFKGKVLLIVNVASRCGLTPSNYSELSHLYEKYKTQGFEILAFPCNQFGGQEPGSNPEIKEFACTXFKAEFPIFDKVDVNGPNTAPVYQFLKSSAGGFLGDLVKWNFEKVLVDKNGKVIERYPPTTSPXQIEKDXXKLV 745
            Y + V D  G+ V LSK++GK  L+VNVAS C  T +NY  L  L+ ++    F +LAFPCNQFG  EPG+N EI+  A   +   FP+F K+ + G    P Y+FL  S         +WNF K LVD  G+V++ + P  +   I  +   LV
Sbjct:   48 YSYEVTDAKGRTVALSKYRGKASLVVNVASGCPHTEANYRSLQELHREFGPSHFTVLAFPCNQFGESEPGTNKEIEAMAKRNYGVTFPVFSKIKILGSEAEPAYRFLVDST----KKEPRWNFWKYLVDPQGQVVKYWRPDETAESIRPEVASLV 198          
The following BLAST results are available for this feature:
BLAST of EY753894 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
GPX42_MOUSE1.959e-3547.10Phospholipid hydroperoxide glutathione peroxidase,... [more]
GPX4_HYLLA1.659e-3446.75Phospholipid hydroperoxide glutathione peroxidase,... [more]
GPX1_YEAST6.969e-3346.36Glutathione peroxidase 1 OS=Saccharomyces cerevisi... [more]
GPX1_CHLRE2.028e-3246.15Glutathione peroxidase 1, mitochondrial OS=Chlamyd... [more]
BTUE_ECOLI2.928e-3144.05Vitamin B12 transport periplasmic protein btuE OS=... [more]
BSAA_STAEQ8.519e-3143.05Glutathione peroxidase homolog bsaA OS=Staphylococ... [more]
GPX7_MOUSE7.211e-3041.42Glutathione peroxidase 7 OS=Mus musculus GN=Gpx7 P... [more]
GPX7_BOVIN2.098e-2942.68Glutathione peroxidase 7 OS=Bos taurus GN=GPX7 PE=... [more]
GPX7_HUMAN3.579e-2941.46Glutathione peroxidase 7 OS=Homo sapiens GN=GPX7 P... [more]
GPX8B_XENLA4.375e-2740.00Probable glutathione peroxidase 8-B OS=Xenopus lae... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-008-B07-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753894 ID=EY753894; Name=EY753894; organism=Citrus sinensis; type=EST; length=901bp
CTTAAATTCTATCTCAATGGCTTCTTATTCGATGCCTTTCTCTGCAGCTT
TCTCCTCACCTTTACGGCATTTCACACAAATCAAAACATGCCCTGCTGCA
TGGGCTTCATCAATGGCGGCTTCATGGACTCCTACTAATTCAATCAAATC
ATCAATTGGGTCCGCTAAACCAGGCTTTCTTCAACATGGGCTGTTTTCCC
AATCTTCAAATTTGCCTGGGTTTTTCGTGAAACGTCGTTCCTTTGGTGTT
CACGCTACAGCTGCTACTGAGAAGTCTTTATATGACTTCACCGTCAAGGA
TATTGATGGTAAAGATGTTCCTCTTAGCAAGTTTAAGGGCAAAGTTCTGT
TGATTGTGAATGTCGCTTCAAGATGTGGCTTGACACCATCTAATTACTCG
GAGCTCTCTCACTTATATGAGAAGTACAAGACTCAAGGATTTGAGATTCT
AGCTTTCCCTTGCAATCAATTTGGTGGGCAAGAGCCTGGATCAAACCCTG
AGATCAAGGAATTCGCTTGTACTANGTTTAAGGCAGAATTTCCCATATTT
GACAAGGTTGATGTAAATGGACCAAACACAGCTCCAGTTTACCAGTTTTT
GAAGTCAAGTGCTGGGGGATTTTTAGGCGACCTTGTCAAGTGGAACTTTG
AGAAAGTCTTAGTGGACAAAAATGGTAAAGTCATCGAGAGATATCCACCA
ACTACCTCGCCTTTNCAAATTGAGAAGGACATNCANAAGCTTGTTGTGCC
ATGAATCTTGACTTGAGCTGCTTGGCCATGTCTCANATGTATCGACGAGA
TAGAAACTGAATTATGTATTATGATATTTCTGAAACGGGCATACATAGAT
GAATTTTCCTGCCTCCCTGAAAGTTATAGGTTTTTAAATCCTAAATTAAA
A
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