EY753891

Overview
NameEY753891
Unique NameEY753891
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753891 vs. ExPASy Swiss-Prot
Match: RAB1A_LYMST (Ras-related protein Rab-1A OS=Lymnaea stagnalis GN=RAB1A PE=2 SV=1)

HSP 1 Score: 318.546 bits (815), Expect = 3.133e-86
Identity = 156/205 (76.10%), Postives = 174/205 (84.88%), Query Frame = 3
Query:  120 IAVMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMKTCRPPTVXIKGQPVN-QKGSCC 731
            ++ MNP+YDYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKT+KLQIWDTAGQERFRTITSSYYRGAHGII+VYDVTDQESFNNVKQWL EIDRYASENVNKLLVGNK DLT KKVV + TAK +AD++GIPF+ETSAK++ NVEQAFM M A+IKNRM    A    +P        PV+  KG CC
Sbjct:    1 MSTMNPDYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDFTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPITAASDSKPSVKINSSTPVSANKGGCC 205          
BLAST of EY753891 vs. ExPASy Swiss-Prot
Match: RAB1A_PIG (Ras-related protein Rab-1A OS=Sus scrofa GN=RAB1A PE=2 SV=3)

HSP 1 Score: 317.775 bits (813), Expect = 5.344e-86
Identity = 156/201 (77.61%), Postives = 168/201 (83.58%), Query Frame = 3
Query:  129 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMKTCRPPTVXIKGQPVNQKGSCC 731
            MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKT+KLQIWDTAGQERFRTITSSYYRGAHGII+VYDVTDQ SFNNVKQWL EIDRYASENVNKLLVGNKCDLT KKVV Y TAK FAD +GIPF+ETSAK++ NVEQ+FM M A+IK RM             V I+  PV Q G  C
Sbjct:    4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKSNVKIQSTPVKQSGGGC 204          
BLAST of EY753891 vs. ExPASy Swiss-Prot
Match: RABD1_ARATH (Ras-related protein RABD1 OS=Arabidopsis thaliana GN=RABD1 PE=1 SV=1)

HSP 1 Score: 312.383 bits (799), Expect = 2.245e-84
Identity = 154/203 (75.86%), Postives = 176/203 (86.70%), Query Frame = 3
Query:  129 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQP-AMKTCRPPTVXIKGQPVNQ-KGSCC 731
            M+ EYDYLFKLLLIGDS VGKSCLLLRFADD+Y+DSYISTIGVDFKIRT+EQDGKT+KLQIWDTAGQERFRTITSSYYRGAHGIIIVYD T+ ESFNNVKQWL+EIDRYA+E+V KLL+GNK D+ + KVVS ET +A ADE+GIPF+ETSAKDS+NVEQAF+ +  +IK +M SQ  A KT  P TV +KGQP+ Q  G CC
Sbjct:    1 MSNEYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQWLSEIDRYANESVCKLLIGNKNDMVESKVVSTETGRALADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQTNANKTSGPGTVQMKGQPIQQNNGGCC 203          
BLAST of EY753891 vs. ExPASy Swiss-Prot
Match: RAB1B_BOVIN (Ras-related protein Rab-1B OS=Bos taurus GN=RAB1B PE=2 SV=1)

HSP 1 Score: 308.531 bits (789), Expect = 3.242e-83
Identity = 156/201 (77.61%), Postives = 168/201 (83.58%), Query Frame = 3
Query:  129 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMKTCRPPTVXIKGQPVNQKGSCC 731
            MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKT+KLQIWDTAGQERFRTITSSYYRGAHGII+VYDVTDQES+ NVKQWL EIDRYASENVNKLLVGNK DLT KKVV   TAK FAD +GIPF+ETSAK++ NVEQAFM M A+IK RM    A    R P + I   PV Q G  C
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGER-PNLKIDSTPVKQAGGGC 200          
BLAST of EY753891 vs. ExPASy Swiss-Prot
Match: RAB1B_RAT (Ras-related protein Rab-1B OS=Rattus norvegicus GN=Rab1b PE=1 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 1.609e-82
Identity = 154/202 (76.24%), Postives = 169/202 (83.66%), Query Frame = 3
Query:  129 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMKTCRPPTVXIKGQPV-NQKGSCC 731
            MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKT+KLQIWDTAGQERFRT+TSSYYRGAHGII+VYDVTDQES+ NVKQWL EIDRYASENVNKLLVGNK DLT KKVV   TAK FAD +G+PF+ETSAK++ NVEQAFM M A+IK RM    A    R P + I   PV +  G CC
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGER-PNLKIDSTPVKSASGGCC 201          
BLAST of EY753891 vs. ExPASy Swiss-Prot
Match: RAB1B_PONAB (Ras-related protein Rab-1B OS=Pongo abelii GN=RAB1B PE=2 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 1.609e-82
Identity = 155/201 (77.11%), Postives = 167/201 (83.08%), Query Frame = 3
Query:  129 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMKTCRPPTVXIKGQPVNQKGSCC 731
            MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKT+KLQIWDTAGQERFRTITSSYYRGAHGII+VYDVTDQES+ NVKQWL EIDRYASENVNKLLVGNK DLT KKVV   TAK FAD +GIPF+ETSAK++ NVEQAFM M A+IK RM    A    R P + I   PV   G  C
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGER-PNLKIDSTPVKPAGGGC 200          
BLAST of EY753891 vs. ExPASy Swiss-Prot
Match: RAB1B_MOUSE (Ras-related protein Rab-1B OS=Mus musculus GN=Rab1b PE=1 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 1.609e-82
Identity = 155/202 (76.73%), Postives = 168/202 (83.17%), Query Frame = 3
Query:  129 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMKTCRPPTVXIKGQPVN-QKGSCC 731
            MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKT+KLQIWDTAGQERFRTITSSYYRGAHGII+VYDVTDQES+ NVKQWL EIDRYASENVNKLLVGNK DLT KKVV   TAK FAD +G+PF+ETSAK++ NVEQAFM M A+IK RM    A    R P + I   PV    G CC
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGER-PNLKIDSTPVKPASGGCC 201          
BLAST of EY753891 vs. ExPASy Swiss-Prot
Match: RAB1B_HUMAN (Ras-related protein Rab-1B OS=Homo sapiens GN=RAB1B PE=1 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 1.609e-82
Identity = 155/201 (77.11%), Postives = 167/201 (83.08%), Query Frame = 3
Query:  129 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMKTCRPPTVXIKGQPVNQKGSCC 731
            MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKT+KLQIWDTAGQERFRTITSSYYRGAHGII+VYDVTDQES+ NVKQWL EIDRYASENVNKLLVGNK DLT KKVV   TAK FAD +GIPF+ETSAK++ NVEQAFM M A+IK RM    A    R P + I   PV   G  C
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGER-PNLKIDSTPVKPAGGGC 200          
BLAST of EY753891 vs. ExPASy Swiss-Prot
Match: RAB1B_PIG (Ras-related protein Rab-1B OS=Sus scrofa GN=RAB1B PE=2 SV=1)

HSP 1 Score: 305.064 bits (780), Expect = 3.585e-82
Identity = 155/201 (77.11%), Postives = 167/201 (83.08%), Query Frame = 3
Query:  129 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMKTCRPPTVXIKGQPVNQKGSCC 731
            MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKT+KLQIWDTAGQER RTITSSYYRGAHGII+VYDVTDQES+ NVKQWL EIDRYASENVNKLLVGNK DLT KKVV   TAK FAD +GIPF+ETSAK++ NVEQAFM M A+IK RM    A    R P + I   PV Q G  C
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERGRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGER-PNLKIDSTPVKQAGGGC 200          
BLAST of EY753891 vs. ExPASy Swiss-Prot
Match: RAB1B_MACFA (Ras-related protein Rab-1B OS=Macaca fascicularis GN=RAB1B PE=2 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 4.682e-82
Identity = 154/201 (76.62%), Postives = 167/201 (83.08%), Query Frame = 3
Query:  129 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMKTCRPPTVXIKGQPVNQKGSCC 731
            MNPEYDYLFKLLLIGDSGVGKSCLLLRFADD+Y +SYISTIGVDFKIRT+E DGKT+KLQIWDTAGQERFRTITSSYYRGAHGII+VYDVTD+ES+ NVKQWL EIDRYASENVNKLLVGNK DLT KKVV   TAK FAD +GIPF+ETSAK++ NVEQAFM M A+IK RM    A    R P + I   PV   G  C
Sbjct:    1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGGER-PNLKIDSTPVKPAGGGC 200          
The following BLAST results are available for this feature:
BLAST of EY753891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAB1A_LYMST3.133e-8676.10Ras-related protein Rab-1A OS=Lymnaea stagnalis GN... [more]
RAB1A_PIG5.344e-8677.61Ras-related protein Rab-1A OS=Sus scrofa GN=RAB1A ... [more]
RABD1_ARATH2.245e-8475.86Ras-related protein RABD1 OS=Arabidopsis thaliana ... [more]
RAB1B_BOVIN3.242e-8377.61Ras-related protein Rab-1B OS=Bos taurus GN=RAB1B ... [more]
RAB1B_RAT1.609e-8276.24Ras-related protein Rab-1B OS=Rattus norvegicus GN... [more]
RAB1B_PONAB1.609e-8277.11Ras-related protein Rab-1B OS=Pongo abelii GN=RAB1... [more]
RAB1B_MOUSE1.609e-8276.73Ras-related protein Rab-1B OS=Mus musculus GN=Rab1... [more]
RAB1B_HUMAN1.609e-8277.11Ras-related protein Rab-1B OS=Homo sapiens GN=RAB1... [more]
RAB1B_PIG3.585e-8277.11Ras-related protein Rab-1B OS=Sus scrofa GN=RAB1B ... [more]
RAB1B_MACFA4.682e-8276.62Ras-related protein Rab-1B OS=Macaca fascicularis ... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-008-B04-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753891 ID=EY753891; Name=EY753891; organism=Citrus sinensis; type=EST; length=893bp
ATTTTGCTTTTTTCGTCAAATTCTCTCTCAATCTCACATCCTTAGCTTGT
CTGTGCCAAACTCCCGGTCCAATCTCCAGCTGGACCGGTTCGATTCTGCG
CGAACCCCCTCAACATCTTATTGCAGTCATGAATCCTGAATATGACTACT
TGTTCAAGCTTTTGCTGATTGGAGATTCTGGAGTTGGCAAATCATGTCTT
CTTCTGAGATTTGCTGATGATTCGTACCTGGACAGTTACATTAGCACTAT
TGGGGTTGACTTTAAAATTCGCACAGTGGAGCAAGACGGGAAGACTGTAA
AACTCCAAATTTGGGACACTGCAGGGCAAGAACGATTCAGGACAATCACT
AGCAGCTACTACCGTGGAGCACATGGCATTATTATTGTTTATGATGTTAC
AGACCAAGAGAGCTTCAACAACGTTAAGCAGTGGTTGAATGAAATTGATC
GCTATGCAAGTGAAAATGTAAACAAGCTTCTGGTTGGAAACAAGTGTGAT
CTCACTGATAAGAAAGTTGTCTCTTATGAAACAGCGAAGGCATTTGCTGA
TGAAATTGGCATCCCGTTCATGGAGACCAGCGCAAAGGATTCTTTGAACG
TGGAACAAGCTTTTATGGCTATGACTGCTGACATTAAGAACAGGATGGCA
AGTCAACCTGCAATGAAAACATGCAGGCCACCAACTGTGCANATAAAAGG
ACAACCGGTGAACCAGAAGGGCAGCTGCTGCTCAACTAANTCATTTGGCT
TATCCTTCATGGCGNNGCATTATTTATGGGGTAGCTTCTCAATCCCGTTG
AAGGACCAGTGAAAAACTATTCCTACCCATGAATATATGACGGATTGCTT
ACTAGTTTTTGGAAGTATTGGGAAATTCCATTCTTCAGCCATA
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