EY753891

Overview
NameEY753891
Unique NameEY753891
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753891 vs. ExPASy Swiss-Prot
Match: RABF1_DICDI (Ras-related protein RabF1 OS=Dictyostelium discoideum GN=rabF1-1 PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 7.290e-51
Identity = 98/184 (53.26%), Postives = 136/184 (73.91%), Query Frame = 3
Query:  129 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMKTCRP 680
            M+ EY++LFK +L GDSGVGK+ +L R  DD++ +++I TIG++FKI+TV  +GK +KLQIWDTAG++RFR + +S+YRG HG+IIVYDVTDQ SF NV  W+ +I RYA+ENV K+++GNK DL  +KVV    A+ FAD + IPF E SAK S+N+E+AF+++     NR+      KT  P
Sbjct:    1 MSKEYEHLFKFVLAGDSGVGKTSILFRITDDTFTETHI-TIGIEFKIKTVYIEGKPIKLQIWDTAGEKRFR-VHNSHYRGCHGVIIVYDVTDQRSFENVPSWIEDIRRYANENVIKIIIGNKNDLVSQKVVDPFLAQEFADSLDIPFKEISAKQSINIEEAFISLVKLCINRIEETSLKKTQSP 182          
BLAST of EY753891 vs. ExPASy Swiss-Prot
Match: RAB3C_BOVIN (Ras-related protein Rab-3C OS=Bos taurus GN=RAB3C PE=2 SV=3)

HSP 1 Score: 201.06 bits (510), Expect = 7.290e-51
Identity = 93/201 (46.27%), Postives = 142/201 (70.65%), Query Frame = 3
Query:  141 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMA----SQPAMKTCRPPTVXIKGQPVNQKGSCC 731
            +DY+FKLL+IG+S VGK+  L R+ADDS+  +++ST+G+DFK++TV ++ K +KLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W  +I  Y+ +N   +LVGNKCD+ D++V+S E  +   +++G  F ETSAKD++NV+Q F  +   I ++M+    + PA+   +  T   +  P  Q    C
Sbjct:   27 FDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESLETDPAITAAKQNTRLKETPPPPQPNCGC 227          
BLAST of EY753891 vs. ExPASy Swiss-Prot
Match: RAB3C_RAT (Ras-related protein Rab-3C OS=Rattus norvegicus GN=Rab3c PE=1 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 9.521e-51
Identity = 93/201 (46.27%), Postives = 141/201 (70.15%), Query Frame = 3
Query:  141 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMA----SQPAMKTCRPPTVXIKGQPVNQKGSCC 731
            +DY+FKLL+IG+S VGK+  L R+ADDS+  +++ST+G+DFK++TV ++ K +KLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W  +I  Y+ +N   +L GNKCD+ D++VVS E  +   +++G  F ETSAKD++NV+Q F  +   I ++M+    + PA+   +  T   +  P  Q    C
Sbjct:   27 FDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILAGNKCDMEDERVVSTERGQRLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESLETDPAITAAKQSTRLKETPPPPQPNCGC 227          
BLAST of EY753891 vs. ExPASy Swiss-Prot
Match: RAB3C_MOUSE (Ras-related protein Rab-3C OS=Mus musculus GN=Rab3c PE=1 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 9.521e-51
Identity = 93/201 (46.27%), Postives = 141/201 (70.15%), Query Frame = 3
Query:  141 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMA----SQPAMKTCRPPTVXIKGQPVNQKGSCC 731
            +DY+FKLL+IG+S VGK+  L R+ADDS+  +++ST+G+DFK++TV ++ K +KLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W  +I  Y+ +N   +L GNKCD+ D++VVS E  +   +++G  F ETSAKD++NV+Q F  +   I ++M+    + PA+   +  T   +  P  Q    C
Sbjct:   27 FDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILAGNKCDMEDERVVSTERGQRLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESLETDPAITAAKQSTRLKETPPPPQPNCGC 227          
BLAST of EY753891 vs. ExPASy Swiss-Prot
Match: RAB26_MOUSE (Ras-related protein Rab-26 OS=Mus musculus GN=Rab26 PE=2 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 9.521e-51
Identity = 97/204 (47.55%), Postives = 142/204 (69.61%), Query Frame = 3
Query:   63 PGPISSWTGSILREPPQHL---IAVMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYL-DSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPA 662
            PGP +   G     PPQ +   +      YD  FK++L+GDSGVGK+CLL+RF D ++L  ++IST+G+DF+ + ++ DG  VKLQIWDTAGQERFR++T +YYR AH ++++YD+T+++SF+N++ WL EI  YA ++V  +L+GNK D T  +VV  E  +  A E G+PFMETSA+  LNV+ AF A+  ++K R A  P+
Sbjct:   40 PGPEAPPNG-----PPQSIRPSLGSTGDFYDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQDRVVKREDGEKLAKEYGLPFMETSARTGLNVDLAFTAIAKELKQRSAKAPS 238          
BLAST of EY753891 vs. ExPASy Swiss-Prot
Match: RAB3_CAEEL (Ras-related protein Rab-3 OS=Caenorhabditis elegans GN=rab-3 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.624e-50
Identity = 88/170 (51.76%), Postives = 131/170 (77.06%), Query Frame = 3
Query:  141 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMA 650
            +DY+FKLL+IG+S VGK+  L R+ DDS+  +++ST+G+DFK++TV +  K VKLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN+V+ W  +I  Y+ EN   +LVGNKCD+  ++VVS +  +  AD++G+ F ETSAK+++NV+  F  +   I ++MA
Sbjct:   19 FDYMFKLLIIGNSSVGKTSFLFRYCDDSFTSAFVSTVGIDFKVKTVFRGDKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVLVGNKCDMDSERVVSMDRGRQLADQLGLEFFETSAKENINVKAVFEKLVEIICDKMA 188          
BLAST of EY753891 vs. ExPASy Swiss-Prot
Match: RAB26_RAT (Ras-related protein Rab-26 OS=Rattus norvegicus GN=Rab26 PE=2 SV=2)

HSP 1 Score: 199.904 bits (507), Expect = 1.624e-50
Identity = 90/175 (51.43%), Postives = 132/175 (75.43%), Query Frame = 3
Query:  141 YDYLFKLLLIGDSGVGKSCLLLRFADDSYL-DSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPA 662
            YD  FK++L+GDSGVGK+CLL+RF D ++L  ++IST+G+DF+ + ++ DG  VKLQIWDTAGQERFR++T +YYR AH ++++YD+T+++SF+N++ WL EI  YA ++V  +L+GNK D T ++VV  E  +  A E G+PFMETSAK  LNV+ AF A+  ++K R    P+
Sbjct:   61 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGMKVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQAWLTEIQEYAQQDVVLMLLGNKVDSTQERVVKREDGEKLAKEYGLPFMETSAKSGLNVDLAFTAIAKELKQRSTKAPS 235          
BLAST of EY753891 vs. ExPASy Swiss-Prot
Match: SEC4_CANAL (Ras-related protein SEC4 OS=Candida albicans GN=SEC4 PE=3 SV=1)

HSP 1 Score: 199.519 bits (506), Expect = 2.121e-50
Identity = 91/168 (54.17%), Postives = 124/168 (73.81%), Query Frame = 3
Query:  141 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNR 644
            YD + KLLL+GDSGVGKSCLLLRF +D +  S+I+TIG+DFKIRT+E  GK +KLQ+WDTAGQERFRTIT++YYRGA GI+++YDVTD  SF NV+ W   + ++A+E+    LVGNKCD    + VS E  +  A ++ +PF+E SAK + NV+  F  + + I+ +
Sbjct:   11 YDMIMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHANEDAQIFLVGNKCDDEVNRQVSKEQGQELAAKLNVPFLEASAKSNENVDSIFYELASIIQEK 178          
BLAST of EY753891 vs. ExPASy Swiss-Prot
Match: RAB3D_MOUSE (Ras-related protein Rab-3D OS=Mus musculus GN=Rab3d PE=1 SV=1)

HSP 1 Score: 198.749 bits (504), Expect = 3.618e-50
Identity = 90/182 (49.45%), Postives = 131/182 (71.98%), Query Frame = 3
Query:  102 EPPQHLIAVMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRM 647
            EPP       +  +DY+FKLLLIG+S VGK+  L R+ADDS+  +++ST+G+DFK++TV +  K +KLQIWDTAGQER+RTIT++YYRGA G +++YD+ +QESF  V+ W  +I  Y+ +N   +LVGNKCDL D++VV  E  +  AD++G  F E SAK+++NV+Q F  +   I ++M
Sbjct:    6 EPPASPRDAADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDIICDKM 187          
BLAST of EY753891 vs. ExPASy Swiss-Prot
Match: RABG1_DICDI (Ras-related protein RabG1 OS=Dictyostelium discoideum GN=rabG1 PE=3 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 8.060e-50
Identity = 98/195 (50.26%), Postives = 135/195 (69.23%), Query Frame = 3
Query:  150 LFKLLLIGDSGVGKSCLLLRFAD-DSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMKTCRPPTVXIKGQPVNQKGSCC 731
            +FK+LLIGDS VGK+ LLLRF D +++ ++ ++   VD+K + +  DG+T  LQIWDTAGQERFRTITSS+YRGAHG+++ YDVTDQ ++NNV  W+ EI RY    V+++LVGNKCDL D+K+V+   A+ +AD +GIPF+ETSA   +NVE+AFMAM  +I             +P    + G P   K + C
Sbjct:    6 VFKILLIGDSAVGKTSLLLRFTDPNNFQETSVNMTSVDYKNKNITIDGRTFNLQIWDTAGQERFRTITSSFYRGAHGVLVCYDVTDQLTYNNVGLWMQEIQRYGVLGVSRVLVGNKCDLEDRKLVNASIAQEYADILGIPFIETSATTGVNVEEAFMAMADEIYRNHIGGSKPSVVKP----VCGSPPRTKKNIC 196          
The following BLAST results are available for this feature:
BLAST of EY753891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RABF1_DICDI7.290e-5153.26Ras-related protein RabF1 OS=Dictyostelium discoid... [more]
RAB3C_BOVIN7.290e-5146.27Ras-related protein Rab-3C OS=Bos taurus GN=RAB3C ... [more]
RAB3C_RAT9.521e-5146.27Ras-related protein Rab-3C OS=Rattus norvegicus GN... [more]
RAB3C_MOUSE9.521e-5146.27Ras-related protein Rab-3C OS=Mus musculus GN=Rab3... [more]
RAB26_MOUSE9.521e-5147.55Ras-related protein Rab-26 OS=Mus musculus GN=Rab2... [more]
RAB3_CAEEL1.624e-5051.76Ras-related protein Rab-3 OS=Caenorhabditis elegan... [more]
RAB26_RAT1.624e-5051.43Ras-related protein Rab-26 OS=Rattus norvegicus GN... [more]
SEC4_CANAL2.121e-5054.17Ras-related protein SEC4 OS=Candida albicans GN=SE... [more]
RAB3D_MOUSE3.618e-5049.45Ras-related protein Rab-3D OS=Mus musculus GN=Rab3... [more]
RABG1_DICDI8.060e-5050.26Ras-related protein RabG1 OS=Dictyostelium discoid... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-008-B04-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753891 ID=EY753891; Name=EY753891; organism=Citrus sinensis; type=EST; length=893bp
ATTTTGCTTTTTTCGTCAAATTCTCTCTCAATCTCACATCCTTAGCTTGT
CTGTGCCAAACTCCCGGTCCAATCTCCAGCTGGACCGGTTCGATTCTGCG
CGAACCCCCTCAACATCTTATTGCAGTCATGAATCCTGAATATGACTACT
TGTTCAAGCTTTTGCTGATTGGAGATTCTGGAGTTGGCAAATCATGTCTT
CTTCTGAGATTTGCTGATGATTCGTACCTGGACAGTTACATTAGCACTAT
TGGGGTTGACTTTAAAATTCGCACAGTGGAGCAAGACGGGAAGACTGTAA
AACTCCAAATTTGGGACACTGCAGGGCAAGAACGATTCAGGACAATCACT
AGCAGCTACTACCGTGGAGCACATGGCATTATTATTGTTTATGATGTTAC
AGACCAAGAGAGCTTCAACAACGTTAAGCAGTGGTTGAATGAAATTGATC
GCTATGCAAGTGAAAATGTAAACAAGCTTCTGGTTGGAAACAAGTGTGAT
CTCACTGATAAGAAAGTTGTCTCTTATGAAACAGCGAAGGCATTTGCTGA
TGAAATTGGCATCCCGTTCATGGAGACCAGCGCAAAGGATTCTTTGAACG
TGGAACAAGCTTTTATGGCTATGACTGCTGACATTAAGAACAGGATGGCA
AGTCAACCTGCAATGAAAACATGCAGGCCACCAACTGTGCANATAAAAGG
ACAACCGGTGAACCAGAAGGGCAGCTGCTGCTCAACTAANTCATTTGGCT
TATCCTTCATGGCGNNGCATTATTTATGGGGTAGCTTCTCAATCCCGTTG
AAGGACCAGTGAAAAACTATTCCTACCCATGAATATATGACGGATTGCTT
ACTAGTTTTTGGAAGTATTGGGAAATTCCATTCTTCAGCCATA
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