EY753891

Overview
NameEY753891
Unique NameEY753891
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753891 vs. ExPASy Swiss-Prot
Match: RAB3D_RAT (GTP-binding protein Rab-3D OS=Rattus norvegicus GN=Rab3d PE=1 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 8.060e-50
Identity = 90/182 (49.45%), Postives = 131/182 (71.98%), Query Frame = 3
Query:  102 EPPQHLIAVMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRM 647
            EPP       +  +DY+FKLLLIG+S VGK+  L R+ADDS+  +++ST+G+DFK++TV +  K +KLQIWDTAGQER+RTIT++YYRGA G +++YD+ +QESF  V+ W  +I  Y+ +N   +LVGNKCDL D++VVS E  +  A ++G  F E SAK+++NV+Q F  +   I ++M
Sbjct:    6 EPPASPRDAADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVSAEDGQRLAGDLGFEFFEASAKENINVKQVFERLVDIICDKM 187          
BLAST of EY753891 vs. ExPASy Swiss-Prot
Match: RAB37_MOUSE (Ras-related protein Rab-37 OS=Mus musculus GN=Rab37 PE=1 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 8.060e-50
Identity = 101/229 (44.10%), Postives = 149/229 (65.07%), Query Frame = 3
Query:   60 TPGPISSWTGSIL-REPPQHLIAVMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLD-SYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMKTCRPPTVXIKGQPVNQK--GSCCS 734
            TPG  ++  G    R PP       +P YD   K++L+GDSGVGK+C L++F D ++L  ++I+T+G+D + + V  DG  VKLQIWDTAGQERFR++T +YYR A  ++++YD+T+Q SF+N++ WL EI  YA  +V  +L+GNK D++ ++V+  E  +  A E G+PFMETSAK  +NVE AF+A+  ++K R   QP       P+  I+    +QK   SCCS
Sbjct:    4 TPGAATAGDGEAPERSPP------FSPNYDLTGKVMLLGDSGVGKTCFLIQFKDGAFLSGTFIATVGIDSRNKVVTVDGARVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNQSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADVSSERVIRSEDGETLAREYGVPFMETSAKTGMNVELAFLAIAKELKYRAGRQP-----DEPSFQIRDYVESQKKRSSCCS 221          
BLAST of EY753891 vs. ExPASy Swiss-Prot
Match: RB2BV_BETVU (Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 3.063e-49
Identity = 98/207 (47.34%), Postives = 142/207 (68.60%), Query Frame = 3
Query:  138 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADI-----KNRMASQPAMKTC--RPPTVXIKGQPVNQKGSCCST 737
            EYDYLFK++LIGDSGVGKS +L RF  + +     STIGV+F  RT++ +GKTVK QIWDTAGQER+R ITS+YYRGA G ++VYD+T +++F+NV++WL E+  +A  N+  ++ GNK DL   + VS E  +A A++ G+ F+ETSA +++N+E+AF  +  +I     K  +A+Q A      +  T+ +     NQ+ SCCST
Sbjct:    8 EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKKALAAQEASSNLPGQGTTINVADASANQRRSCCST 214          
BLAST of EY753891 vs. ExPASy Swiss-Prot
Match: RAB37_HUMAN (Ras-related protein Rab-37 OS=Homo sapiens GN=RAB37 PE=1 SV=3)

HSP 1 Score: 194.897 bits (494), Expect = 5.224e-49
Identity = 98/229 (42.79%), Postives = 150/229 (65.50%), Query Frame = 3
Query:   60 TPGPISSWTGSIL-REPPQHLIAVMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLD-SYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMASQPAMKTCRPPTVXIKGQPVNQK--GSCCS 734
            TPG +++  G    R PP       +P YD   K++L+GD+GVGK+C L++F D ++L  ++I+T+G+DF+ + V  DG  VKLQIWDTAGQERFR++T +YYR A  ++++YD+T++ SF+N++ WL EI  YA  +V  +L+GNK D++ ++V+  E  +  A E G+PF+ETSAK  +NVE AF+A+  ++K R   Q        P+  I+    +QK   SCCS
Sbjct:    4 TPGAVATRDGEAPERSPP------CSPSYDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAGHQ-----ADEPSFQIRDYVESQKKRSSCCS 221          
BLAST of EY753891 vs. ExPASy Swiss-Prot
Match: RAB3D_HUMAN (Ras-related protein Rab-3D OS=Homo sapiens GN=RAB3D PE=1 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 6.823e-49
Identity = 87/169 (51.48%), Postives = 126/169 (74.56%), Query Frame = 3
Query:  141 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRM 647
            +DY+FKLLLIG+S VGK+  L R+ADDS+  +++ST+G+DFK++TV +  K +KLQIWDTAGQER+RTIT++YYRGA G +++YD+ +QESF  V+ W  +I  Y+ +N   +LVGNKCDL D++VV  E  +  AD++G  F E SAK+++NV+Q F  +   I  +M
Sbjct:   19 FDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYSWDNAQVILVGNKCDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVICEKM 187          
BLAST of EY753891 vs. ExPASy Swiss-Prot
Match: RAB3B_HUMAN (Ras-related protein Rab-3B OS=Homo sapiens GN=RAB3B PE=1 SV=2)

HSP 1 Score: 194.512 bits (493), Expect = 6.823e-49
Identity = 91/201 (45.27%), Postives = 140/201 (69.65%), Query Frame = 3
Query:  141 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMA----SQPAMKTCRPPTVXIKGQPVNQKGSCC 731
            +DY+FKLL+IG+S VGK+  L R+ADD++  +++ST+G+DFK++TV +  K VKLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W  +I  Y+ +N   +LVGNKCD+ +++VV  E  +  A+++G  F E SAK++++V QAF  +   I ++M+    + P+M      T      P+ Q+   C
Sbjct:   19 FDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMSDSLDTDPSMLGSSKNTRLSDTPPLLQQNCSC 219          
BLAST of EY753891 vs. ExPASy Swiss-Prot
Match: RAB3B_MOUSE (Ras-related protein Rab-3B OS=Mus musculus GN=Rab3b PE=1 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 8.911e-49
Identity = 90/201 (44.78%), Postives = 140/201 (69.65%), Query Frame = 3
Query:  141 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMA----SQPAMKTCRPPTVXIKGQPVNQKGSCC 731
            +DY+FKLL+IG+S VGK+  L R+ADD++  +++ST+G+DFK++TV +  K VKLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W  +I  Y+ +N   +LVGNKCD+ +++VV  E  +  A+++G  F E SAK++++V QAF  +   I ++M+    + P++      T      P+ Q+   C
Sbjct:   19 FDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGRLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMSDSMDTDPSVLGASKTTRLSDTPPLLQQNCSC 219          
BLAST of EY753891 vs. ExPASy Swiss-Prot
Match: RAB3B_MESAU (Ras-related protein Rab-3B OS=Mesocricetus auratus GN=RAB3B PE=2 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 8.911e-49
Identity = 90/201 (44.78%), Postives = 140/201 (69.65%), Query Frame = 3
Query:  141 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMA----SQPAMKTCRPPTVXIKGQPVNQKGSCC 731
            +DY+FKLL+IG+S VGK+  L R+ADD++  +++ST+G+DFK++TV +  K VKLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W  +I  Y+ +N   +LVGNKCD+ +++VV  E  +  A+++G  F E SAK++++V QAF  +   I ++M+    + P++      T      P+ Q+   C
Sbjct:   19 FDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGRLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMSDSLDTDPSVLGASKTTRLSDTPPLLQQNCSC 219          
BLAST of EY753891 vs. ExPASy Swiss-Prot
Match: RAB3B_RAT (Ras-related protein Rab-3B OS=Rattus norvegicus GN=Rab3b PE=1 SV=2)

HSP 1 Score: 193.741 bits (491), Expect = 1.164e-48
Identity = 89/201 (44.28%), Postives = 140/201 (69.65%), Query Frame = 3
Query:  141 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMA----SQPAMKTCRPPTVXIKGQPVNQKGSCC 731
            +DY+FKLL+IG+S VGK+  L R+ADD++  +++ST+G+DFK++TV +  K VKLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W  +I  Y+ +N   +LVGNKCD+ +++V+  E  +  A+++G  F E SAK++++V QAF  +   I ++M+    + P++      T      P+ Q+   C
Sbjct:   19 FDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVIPTEKGRLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMSDSMDTDPSVLGASKTTRLSDTPPLLQQNCSC 219          
BLAST of EY753891 vs. ExPASy Swiss-Prot
Match: RAB3B_BOVIN (Ras-related protein Rab-3B OS=Bos taurus GN=RAB3B PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 1.164e-48
Identity = 85/170 (50.00%), Postives = 130/170 (76.47%), Query Frame = 3
Query:  141 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTVKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLTDKKVVSYETAKAFADEIGIPFMETSAKDSLNVEQAFMAMTADIKNRMA 650
            +DY+FKLL+IG+S VGK+  L R+ADD++  +++ST+G+DFK++TV +  K VKLQIWDTAGQER+RTIT++YYRGA G I++YD+T++ESFN V+ W  +I  Y+ +N   +LVGNKCD+ +++VV  E  +  A+++G  F E SAK++++V QAF  +   I ++M+
Sbjct:   19 FDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEERVVPTEKGRLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMS 188          
The following BLAST results are available for this feature:
BLAST of EY753891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAB3D_RAT8.060e-5049.45GTP-binding protein Rab-3D OS=Rattus norvegicus GN... [more]
RAB37_MOUSE8.060e-5044.10Ras-related protein Rab-37 OS=Mus musculus GN=Rab3... [more]
RB2BV_BETVU3.063e-4947.34Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB... [more]
RAB37_HUMAN5.224e-4942.79Ras-related protein Rab-37 OS=Homo sapiens GN=RAB3... [more]
RAB3D_HUMAN6.823e-4951.48Ras-related protein Rab-3D OS=Homo sapiens GN=RAB3... [more]
RAB3B_HUMAN6.823e-4945.27Ras-related protein Rab-3B OS=Homo sapiens GN=RAB3... [more]
RAB3B_MOUSE8.911e-4944.78Ras-related protein Rab-3B OS=Mus musculus GN=Rab3... [more]
RAB3B_MESAU8.911e-4944.78Ras-related protein Rab-3B OS=Mesocricetus auratus... [more]
RAB3B_RAT1.164e-4844.28Ras-related protein Rab-3B OS=Rattus norvegicus GN... [more]
RAB3B_BOVIN1.164e-4850.00Ras-related protein Rab-3B OS=Bos taurus GN=RAB3B ... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-008-B04-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753891 ID=EY753891; Name=EY753891; organism=Citrus sinensis; type=EST; length=893bp
ATTTTGCTTTTTTCGTCAAATTCTCTCTCAATCTCACATCCTTAGCTTGT
CTGTGCCAAACTCCCGGTCCAATCTCCAGCTGGACCGGTTCGATTCTGCG
CGAACCCCCTCAACATCTTATTGCAGTCATGAATCCTGAATATGACTACT
TGTTCAAGCTTTTGCTGATTGGAGATTCTGGAGTTGGCAAATCATGTCTT
CTTCTGAGATTTGCTGATGATTCGTACCTGGACAGTTACATTAGCACTAT
TGGGGTTGACTTTAAAATTCGCACAGTGGAGCAAGACGGGAAGACTGTAA
AACTCCAAATTTGGGACACTGCAGGGCAAGAACGATTCAGGACAATCACT
AGCAGCTACTACCGTGGAGCACATGGCATTATTATTGTTTATGATGTTAC
AGACCAAGAGAGCTTCAACAACGTTAAGCAGTGGTTGAATGAAATTGATC
GCTATGCAAGTGAAAATGTAAACAAGCTTCTGGTTGGAAACAAGTGTGAT
CTCACTGATAAGAAAGTTGTCTCTTATGAAACAGCGAAGGCATTTGCTGA
TGAAATTGGCATCCCGTTCATGGAGACCAGCGCAAAGGATTCTTTGAACG
TGGAACAAGCTTTTATGGCTATGACTGCTGACATTAAGAACAGGATGGCA
AGTCAACCTGCAATGAAAACATGCAGGCCACCAACTGTGCANATAAAAGG
ACAACCGGTGAACCAGAAGGGCAGCTGCTGCTCAACTAANTCATTTGGCT
TATCCTTCATGGCGNNGCATTATTTATGGGGTAGCTTCTCAATCCCGTTG
AAGGACCAGTGAAAAACTATTCCTACCCATGAATATATGACGGATTGCTT
ACTAGTTTTTGGAAGTATTGGGAAATTCCATTCTTCAGCCATA
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