EY753889

Overview
NameEY753889
Unique NameEY753889
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length920
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY753889 vs. ExPASy Swiss-Prot
Match: Y2559_ORYSJ (Putative B3 domain-containing protein Os02g0455900 OS=Oryza sativa subsp. japonica GN=Os02g0455900 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.668e-11
Identity = 40/100 (40.00%), Postives = 55/100 (55.00%), Query Frame = 2 
Query:  233 LFEKAVTPSDVG-KLNRLVIPKQHAEKHFPLQSGSTSKG----LLLNFEDVTGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFHRSTGGDR 517
            LF K + PSDV     +LVIP +H  K   +   +  +G    +++   +VTGK+W FRY  W     + LTKGW  + +EK L+AGD VSF  ST   R
Sbjct:   28 LFGKVLMPSDVSWDTEQLVIPDEHVGKLLDMVVMNRPEGGFFVVVVEDGEVTGKLWLFRY--WKRDDVHCLTKGWGCYAREKGLRAGDTVSFFHSTACGR 125
The following BLAST results are available for this feature:
BLAST of EY753889 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
Y2559_ORYSJ7.668e-1140.00Putative B3 domain-containing protein Os02g0455900... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-008-B02-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753889 ID=EY753889; Name=EY753889; organism=Citrus sinensis; type=EST; length=920bp
CCGGNATTCCAGAGCCGACCCACGCGTCCGATCGAAATGGCTTTCTTGAG
CTCCCACTCCAAGTCCGCAGATCGTCGATATGCTGAGGAAGCACACTTAC
AACGACGAGCTCGAGCAGAGCAAAAGAAACTACGGCCTCGATGCCAACGG
CAAGCGTGTAATCAAACACGGGGAAGGTGATGGTGTTGCCACTGCCTTCG
GTTCAGACCGGGTCCTTAAAGCGCGTGACCAGCTTTTTGAAAAGGCCGTT
ACCCCAAGTGACGTGGGGAAGCTGAACCGGCTCGTGATACCCAAGCAGCA
CGCGGAGAAGCACTTCCCTTTACAGAGCGGAAGCACTTCCAAGGGACTGC
TCTTGAACTTTGAGGATGTCACCGGCAAAGTTTGGAGGTTTAGGTACTCC
TACTGGAACAGCAGTCAAAGCTACGTTTTGACCAAAGGGTGGAGCCGGTT
CGTCAAGGAGAAGAATTTGAAAGCCGGTGACATTGTTAGCTTTCACAGAT
CGACCGGTGGGGATAGGCAGCTTTACATTGATTGGAAAGCCAGAACAGGA
CCGGTCGAGAACCCGGTCGAGCCGGTCCAGATGATGAGGCTATTTGGGGT
CAACATTTTCAAAATTCCTGGGAATGGTCTTGTTGGTGTCNATAAGATTG
GGTGGCACATTAATAATAATAACGACGGCCAAAGGCTTANAGAAATGGAG
CTCTTGTCTCTAGAGTGCCAGCAAAAACAAGAATGATTGGAGCTTCGAAA
CACCTTTTTTCTTTTTCTTCTTTTTTGAAATCCTATTCCTTGGGGGAATT
TTCCTTTTCTCTTTTCCTTTGGGGGTTTTGGGATTTTGAGGAGTTTAAGG
GGGAAAAAAAACTGGGGAAGGTGGGGCCCCTTTTTGCAGTTGCAAAGGAA
AGGAAGGGTTAATTGTAAAT
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