EY753864 | Citrus Genome Database

Overview


Name	EY753864
Unique Name	EY753864
Type	EST
Organism	Citrus sinensis (Sweet orange)
Sequence length	911

Libraries


Library Name	Type
Sweet orange leaf, field plant A	cdna_library

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
BLAST: Citrus ESTs to Prunus persica proteins V1	2010-05-10
BLAST: Citrus ESTs to Populus V2 proteins	2010-05-10
BLAST: Citrus ESTs to TAIR9	2010-05-10
BLAST: Citrus ESTs to SwissProt	2010-05-10

Homology

BLAST of EY753864 vs. ExPASy Swiss-Prot
Match: HIS7_BURPS (Imidazoleglycerol-phosphate dehydratase OS=Burkholderia pseudomallei GN=hisB PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 5.634e-39
Identity = 66/125 (52.80%), Postives = 87/125 (69.60%), Query Frame = 2

Query:  281 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRAHLNYDLQIPHXRV 655
            R+ +V R T ET +SVKI++DG+G    +T +PFLDHMLDQ+A HGL D+ + A GD HIDDHHT EDVG+ +G A+ +A+GDRKGI R+G    PLDEAL  V +D SGR  L + +     R+
Sbjct:    2 RVAQVVRNTSETQISVKIDLDGTGRQKLATGVPFLDHMLDQIARHGLVDLDIEAHGDTHIDDHHTVEDVGITLGQAVAKAVGDRKGIRRYGHSYVPLDEALSRVVIDFSGRPGLEFHVPFTRARI 126

HSP 2 Score: 43.8986 bits (102), Expect = 5.634e-39
Identity = 22/49 (44.90%), Postives = 28/49 (57.14%), Query Frame = 1

Query:  655 GTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKXSHHIIGAPFKLLLGALR 801
            GT+D  L   FF+  VN +G+TLHI  L G  +HH +   FK    ALR
Sbjct:  127 GTFDVDLSIEFFRGFVNHAGVTLHIDNLRGVNAHHQLETVFKAFGRALR 175

BLAST of EY753864 vs. ExPASy Swiss-Prot
Match: HIS7_BURP6 (Imidazoleglycerol-phosphate dehydratase OS=Burkholderia pseudomallei (strain 668) GN=hisB PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 5.634e-39
Identity = 66/125 (52.80%), Postives = 87/125 (69.60%), Query Frame = 2

Query:  281 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRAHLNYDLQIPHXRV 655
            R+ +V R T ET +SVKI++DG+G    +T +PFLDHMLDQ+A HGL D+ + A GD HIDDHHT EDVG+ +G A+ +A+GDRKGI R+G    PLDEAL  V +D SGR  L + +     R+
Sbjct:    2 RVAQVVRNTSETQISVKIDLDGTGRQKLATGVPFLDHMLDQIARHGLVDLDIEAHGDTHIDDHHTVEDVGITLGQAVAKAVGDRKGIRRYGHSYVPLDEALSRVVIDFSGRPGLEFHVPFTRARI 126

HSP 2 Score: 43.8986 bits (102), Expect = 5.634e-39
Identity = 22/49 (44.90%), Postives = 28/49 (57.14%), Query Frame = 1

Query:  655 GTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKXSHHIIGAPFKLLLGALR 801
            GT+D  L   FF+  VN +G+TLHI  L G  +HH +   FK    ALR
Sbjct:  127 GTFDVDLSIEFFRGFVNHAGVTLHIDNLRGVNAHHQLETVFKAFGRALR 175

BLAST of EY753864 vs. ExPASy Swiss-Prot
Match: HIS7_BURP0 (Imidazoleglycerol-phosphate dehydratase OS=Burkholderia pseudomallei (strain 1106a) GN=hisB PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 5.634e-39
Identity = 66/125 (52.80%), Postives = 87/125 (69.60%), Query Frame = 2

Query:  281 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRAHLNYDLQIPHXRV 655
            R+ +V R T ET +SVKI++DG+G    +T +PFLDHMLDQ+A HGL D+ + A GD HIDDHHT EDVG+ +G A+ +A+GDRKGI R+G    PLDEAL  V +D SGR  L + +     R+
Sbjct:    2 RVAQVVRNTSETQISVKIDLDGTGRQKLATGVPFLDHMLDQIARHGLVDLDIEAHGDTHIDDHHTVEDVGITLGQAVAKAVGDRKGIRRYGHSYVPLDEALSRVVIDFSGRPGLEFHVPFTRARI 126

HSP 2 Score: 43.8986 bits (102), Expect = 5.634e-39
Identity = 22/49 (44.90%), Postives = 28/49 (57.14%), Query Frame = 1

Query:  655 GTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKXSHHIIGAPFKLLLGALR 801
            GT+D  L   FF+  VN +G+TLHI  L G  +HH +   FK    ALR
Sbjct:  127 GTFDVDLSIEFFRGFVNHAGVTLHIDNLRGVNAHHQLETVFKAFGRALR 175

BLAST of EY753864 vs. ExPASy Swiss-Prot
Match: HIS7_BURMS (Imidazoleglycerol-phosphate dehydratase OS=Burkholderia mallei (strain SAVP1) GN=hisB PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 5.634e-39
Identity = 66/125 (52.80%), Postives = 87/125 (69.60%), Query Frame = 2

Query:  281 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRAHLNYDLQIPHXRV 655
            R+ +V R T ET +SVKI++DG+G    +T +PFLDHMLDQ+A HGL D+ + A GD HIDDHHT EDVG+ +G A+ +A+GDRKGI R+G    PLDEAL  V +D SGR  L + +     R+
Sbjct:    2 RVAQVVRNTSETQISVKIDLDGTGRQKLATGVPFLDHMLDQIARHGLVDLDIEAHGDTHIDDHHTVEDVGITLGQAVAKAVGDRKGIRRYGHSYVPLDEALSRVVIDFSGRPGLEFHVPFTRARI 126

HSP 2 Score: 43.8986 bits (102), Expect = 5.634e-39
Identity = 22/49 (44.90%), Postives = 28/49 (57.14%), Query Frame = 1

Query:  655 GTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKXSHHIIGAPFKLLLGALR 801
            GT+D  L   FF+  VN +G+TLHI  L G  +HH +   FK    ALR
Sbjct:  127 GTFDVDLSIEFFRGFVNHAGVTLHIDNLRGVNAHHQLETVFKAFGRALR 175

BLAST of EY753864 vs. ExPASy Swiss-Prot
Match: HIS7_BURMA (Imidazoleglycerol-phosphate dehydratase OS=Burkholderia mallei GN=hisB PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 5.634e-39
Identity = 66/125 (52.80%), Postives = 87/125 (69.60%), Query Frame = 2

Query:  281 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRAHLNYDLQIPHXRV 655
            R+ +V R T ET +SVKI++DG+G    +T +PFLDHMLDQ+A HGL D+ + A GD HIDDHHT EDVG+ +G A+ +A+GDRKGI R+G    PLDEAL  V +D SGR  L + +     R+
Sbjct:    2 RVAQVVRNTSETQISVKIDLDGTGRQKLATGVPFLDHMLDQIARHGLVDLDIEAHGDTHIDDHHTVEDVGITLGQAVAKAVGDRKGIRRYGHSYVPLDEALSRVVIDFSGRPGLEFHVPFTRARI 126

HSP 2 Score: 43.8986 bits (102), Expect = 5.634e-39
Identity = 22/49 (44.90%), Postives = 28/49 (57.14%), Query Frame = 1

Query:  655 GTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKXSHHIIGAPFKLLLGALR 801
            GT+D  L   FF+  VN +G+TLHI  L G  +HH +   FK    ALR
Sbjct:  127 GTFDVDLSIEFFRGFVNHAGVTLHIDNLRGVNAHHQLETVFKAFGRALR 175

BLAST of EY753864 vs. ExPASy Swiss-Prot
Match: HIS7_BURM9 (Imidazoleglycerol-phosphate dehydratase OS=Burkholderia mallei (strain NCTC 10229) GN=hisB PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 5.634e-39
Identity = 66/125 (52.80%), Postives = 87/125 (69.60%), Query Frame = 2

Query:  281 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRAHLNYDLQIPHXRV 655
            R+ +V R T ET +SVKI++DG+G    +T +PFLDHMLDQ+A HGL D+ + A GD HIDDHHT EDVG+ +G A+ +A+GDRKGI R+G    PLDEAL  V +D SGR  L + +     R+
Sbjct:    2 RVAQVVRNTSETQISVKIDLDGTGRQKLATGVPFLDHMLDQIARHGLVDLDIEAHGDTHIDDHHTVEDVGITLGQAVAKAVGDRKGIRRYGHSYVPLDEALSRVVIDFSGRPGLEFHVPFTRARI 126

HSP 2 Score: 43.8986 bits (102), Expect = 5.634e-39
Identity = 22/49 (44.90%), Postives = 28/49 (57.14%), Query Frame = 1

Query:  655 GTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKXSHHIIGAPFKLLLGALR 801
            GT+D  L   FF+  VN +G+TLHI  L G  +HH +   FK    ALR
Sbjct:  127 GTFDVDLSIEFFRGFVNHAGVTLHIDNLRGVNAHHQLETVFKAFGRALR 175

BLAST of EY753864 vs. ExPASy Swiss-Prot
Match: HIS7_BURM7 (Imidazoleglycerol-phosphate dehydratase OS=Burkholderia mallei (strain NCTC 10247) GN=hisB PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 5.634e-39
Identity = 66/125 (52.80%), Postives = 87/125 (69.60%), Query Frame = 2

Query:  281 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRAHLNYDLQIPHXRV 655
            R+ +V R T ET +SVKI++DG+G    +T +PFLDHMLDQ+A HGL D+ + A GD HIDDHHT EDVG+ +G A+ +A+GDRKGI R+G    PLDEAL  V +D SGR  L + +     R+
Sbjct:    2 RVAQVVRNTSETQISVKIDLDGTGRQKLATGVPFLDHMLDQIARHGLVDLDIEAHGDTHIDDHHTVEDVGITLGQAVAKAVGDRKGIRRYGHSYVPLDEALSRVVIDFSGRPGLEFHVPFTRARI 126

HSP 2 Score: 43.8986 bits (102), Expect = 5.634e-39
Identity = 22/49 (44.90%), Postives = 28/49 (57.14%), Query Frame = 1

Query:  655 GTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKXSHHIIGAPFKLLLGALR 801
            GT+D  L   FF+  VN +G+TLHI  L G  +HH +   FK    ALR
Sbjct:  127 GTFDVDLSIEFFRGFVNHAGVTLHIDNLRGVNAHHQLETVFKAFGRALR 175

BLAST of EY753864 vs. ExPASy Swiss-Prot
Match: HIS7_GRABC (Imidazoleglycerol-phosphate dehydratase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) GN=hisB PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 5.634e-39
Identity = 65/125 (52.00%), Postives = 86/125 (68.80%), Query Frame = 2

Query:  281 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRAHLNYDLQIPHXRV 655
            R   + R T ET++ + I++DG+G  D +T I FLDHML  LA H L D+ +RAT D+HIDDHHT EDVG+ +G AL QALGD+KGI RFG    P+DEAL   ++DLSGRAH+ + +     +V
Sbjct:    3 RQATIDRTTSETSIRLSIDLDGTGQTDIATGIGFLDHMLTALARHALLDLTIRATSDLHIDDHHTTEDVGIVLGQALRQALGDKKGIRRFGHAIVPMDEALAEAAIDLSGRAHVAWSVPFLQSKV 127

HSP 2 Score: 45.4394 bits (106), Expect = 5.634e-39
Identity = 22/49 (44.90%), Postives = 30/49 (61.22%), Query Frame = 1

Query:  655 GTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKXSHHIIGAPFKLLLGALR 801
            GT DT+L E FF++    + MTLH+   AG  +HH+  A FK +  ALR
Sbjct:  128 GTMDTELFEEFFRAFGGNALMTLHVTLKAGTNTHHVAEACFKAVARALR 176

BLAST of EY753864 vs. ExPASy Swiss-Prot
Match: HIS7_GEOSM (Imidazoleglycerol-phosphate dehydratase OS=Geobacter sp. (strain M21) GN=hisB PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 5.634e-39
Identity = 62/125 (49.60%), Postives = 86/125 (68.80%), Query Frame = 2

Query:  281 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRAHLNYDLQIPHXRV 655
            R   ++R+TKET + + + +DG G A   T +PFLDHMLD  A HGLFD+ V A GDI ID HHT ED+G+ +G A  +ALGD+ GI R+G+   P+DE L  V+ DLSGR +L Y++Q+P  ++
Sbjct:    3 RSAAIERITKETQIKLSLEIDGKGEAQICTSVPFLDHMLDLFARHGLFDLKVEAHGDIDIDFHHTVEDIGIVLGAAFKEALGDKCGIRRYGNAVVPMDEVLASVATDLSGRPYLVYNVQLPKVKI 127

HSP 2 Score: 45.4394 bits (106), Expect = 5.634e-39
Identity = 22/50 (44.00%), Postives = 27/50 (54.00%), Query Frame = 1

Query:  655 GTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKXSHHIIGAPFKLLLGALRQ 804
            G +D +LV  FFQ  VN  G  LH+  + G   HHI+ A FK    AL Q
Sbjct:  128 GDFDVELVREFFQGFVNHCGANLHLNLMYGDNVHHIVEACFKAAARALDQ 177

BLAST of EY753864 vs. ExPASy Swiss-Prot
Match: HIS7_RALEH (Imidazoleglycerol-phosphate dehydratase OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=hisB PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 7.341e-39
Identity = 66/125 (52.80%), Postives = 86/125 (68.80%), Query Frame = 2

Query:  281 RIGEVKRVTKETNVSVKINVDGSGVADSSTCIPFLDHMLDQLASHGLFDVHVRATGDIHIDDHHTNEDVGLAIGTALLQALGDRKGINRFGDFTAPLDEALIHVSLDLSGRAHLNYDLQIPHXRV 655
            R+ EV R T ET + V +N+DGSG    ++ +PFLDHMLDQ+A HG+FD+ V ATGD HIDDHHT EDVG+ +G A+ +A+GD+KGI R+G    PLDE L  V +D SGR  L + +     RV
Sbjct:    2 RVAEVTRNTSETQIRVSLNLDGSGRQKLASGVPFLDHMLDQIARHGMFDLEVEATGDTHIDDHHTVEDVGITLGQAVARAIGDKKGITRYGHSYVPLDECLSRVVIDFSGRPGLEFHVPFTRARV 126

HSP 2 Score: 41.5874 bits (96), Expect = 7.341e-39
Identity = 21/49 (42.86%), Postives = 27/49 (55.10%), Query Frame = 1

Query:  655 GTYDTQLVEHFFQSLVNTSGMTLHIRQLAGKXSHHIIGAPFKLLLGALR 801
            G++D  L   FF+  VN +G+TLHI  L G  +HH     FK    ALR
Sbjct:  127 GSFDVDLTIEFFRGFVNHAGVTLHIDNLRGINAHHQCETVFKAFGRALR 175

The following BLAST results are available for this feature:

BLAST of EY753864 vs. ExPASy Swiss-Prot

BLAST of EY753864 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500


Match Name	E-value	Identity	Description
HIS7_BURPS	5.634e-39	52.80	Imidazoleglycerol-phosphate dehydratase OS=Burkhol...	[more]
HIS7_BURP6	5.634e-39	52.80	Imidazoleglycerol-phosphate dehydratase OS=Burkhol...	[more]
HIS7_BURP0	5.634e-39	52.80	Imidazoleglycerol-phosphate dehydratase OS=Burkhol...	[more]
HIS7_BURMS	5.634e-39	52.80	Imidazoleglycerol-phosphate dehydratase OS=Burkhol...	[more]
HIS7_BURMA	5.634e-39	52.80	Imidazoleglycerol-phosphate dehydratase OS=Burkhol...	[more]
HIS7_BURM9	5.634e-39	52.80	Imidazoleglycerol-phosphate dehydratase OS=Burkhol...	[more]
HIS7_BURM7	5.634e-39	52.80	Imidazoleglycerol-phosphate dehydratase OS=Burkhol...	[more]
HIS7_GRABC	5.634e-39	52.00	Imidazoleglycerol-phosphate dehydratase OS=Granuli...	[more]
HIS7_GEOSM	5.634e-39	49.60	Imidazoleglycerol-phosphate dehydratase OS=Geobact...	[more]
HIS7_RALEH	7.341e-39	52.80	Imidazoleglycerol-phosphate dehydratase OS=Ralston...	[more]

Pages

Properties


Property Name	Value
Genbank description	CS12-C1-001-007-G10-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>EY753864 ID=EY753864; Name=EY753864; organism=Citrus sinensis; type=EST; length=911bp
TGCTACTCTTTTTGCGACATTGGAAACGATAGTGTGCAAAATGGAGCTCT
CGGTCCCAGCTCGCCTTGTTCACCTTTCAATCTCGTCCACGTCCTCACGC
CGGCTCCTCGTTAAACCAAAAACCAATCTCTCTCGTAAACTTCTCCCCAT
CTCCACACAATACTGCTCCTCAACGCGCCGCATGAACTCCCTCACAACAC
CACGCGCCTCTCTAAACCCAGACGGCGACAGCAAACACAACAACGGGTCC
GCCTCAACTTCCTCTGCCGTCGATTCTGGTCGAATTGGGGAAGTGAAAAG
AGTCACGAAAGAGACCAACGTTTCTGTGAAGATTAACGTCGATGGCTCTG
GCGTTGCTGATTCATCCACTTGCATTCCCTTCCTAGATCACATGCTTGAT
CAACTGGCTTCGCACGGGCTATTTGATGTGCACGTGAGGGCAACCGGAGA
CATTCACATTGATGATCATCATACCAATGAAGACGTTGGGCTTGCCATTG
GCACGGCATTGCTGCAGGCTCTTGGTGATAGGAAAGGAATTAATCGGTTT
GGTGATTTTACAGCTCCTCTTGATGAAGCTTTGATTCATGTTTCATTGGA
TTTATCTGGACGGGCACATTTAAATTATGATTTGCAAATTCCACACANGA
GAGTGGAACTTACGACACTCAATTGGTGGAGCACTTTTTCCAGTCTTTGG
TGAACACTTCTGGAATGACTCTTCACATTCGACAGCTTGCTGGGAAAAAN
TCTCATCACATTATTGGAGCACCTTTCAAGCTTTTGCTAGGGGCTCTCCG
ACAGCACAGNATATGATCCACGTCGCCGTGGACTATACAAGCTCAAAGGG
GTCTACTACGATCTTGAACTTACGGGATCATGGACGGGGGATGGGGTCTC
ATGTAGCCTAA