EY753834

Overview
NameEY753834
Unique NameEY753834
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length896
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753834 vs. ExPASy Swiss-Prot
Match: ARP4_YARLI (Actin-related protein 4 OS=Yarrowia lipolytica GN=ARP4 PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.348e-20
Identity = 62/210 (29.52%), Postives = 99/210 (47.14%), Query Frame = 2
Query:  113 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAY-------VGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLAGRDLTDALMKILTEXSYMFTTTAE 721
            +++  LV D G+   + G+AG+D P+ V  +  G      V +     +         VGD A      + + +P+  GIV++WD ++ IW ++    L    + HP++LTE   N +AN+ K  +I FE+  VPA Y+   AV S +A+G+   +VLD G  V+   P+  G  L     R   AG  L   + K+L       T   E
Sbjct:   14 DEVATLVIDTGSSYTRVGYAGEDTPKLVVSTECGLMADEDVEMEDDTSNTTKKLNKYKVGDSANLPLPNMEVLHPLTDGIVADWDAVQNIWEYSLAR-LNADTKTHPLMLTEPCWNTQANKLKALEIAFESLEVPASYLVKDAVASAFAAGKGNALVLDVGSEVASVTPVIDGLVLYKPARRSQYAGDYLDRQIKKVLVSRGIDLTPRFE 222          
BLAST of EY753834 vs. ExPASy Swiss-Prot
Match: ARP7_ORYSJ (Actin-related protein 7 OS=Oryza sativa subsp. japonica GN=ARP7 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 2.300e-20
Identity = 71/220 (32.27%), Postives = 109/220 (49.55%), Query Frame = 2
Query:  119 IQPLVCDNGTGMVKAGFA-GDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELR-VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLAGRDLTDALMKILTEXSYMFTTTAEREIVRDMKEKLAYVALD 772
            ++ +V D G+ ++KAG A  D +P  V PS           + +  +D  +GD A  +  +     P+  G V +WD ME + ++  Y+ +     +E  +L TE    PKA RE++ Q+MFE FNV   Y + QAVLSLYA GR +G  +D G G     P+  G     A  R D+ G DLT+   + L + +   +   +   V  +KE+ A  A D
Sbjct:    1 MEAVVVDAGSKLLKAGIALPDQSPSLVMPS----------KMKLEVEDGQMGDGAVVEEVV----QPVVRGFVKDWDAMEDLLNYVLYSNIGWEIGDEGQILFTEPLFTPKALREQLAQLMFEKFNVSGFYDSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVCEGAVQHIASKRFDIGGTDLTNLFAEELKKSN--SSVNIDISDVERLKEQYACCAED 204          
BLAST of EY753834 vs. ExPASy Swiss-Prot
Match: ARP7_ORYSI (Actin-related protein 7 OS=Oryza sativa subsp. indica GN=ARP7 PE=2 SV=2)

HSP 1 Score: 99.7525 bits (247), Expect = 2.300e-20
Identity = 71/220 (32.27%), Postives = 109/220 (49.55%), Query Frame = 2
Query:  119 IQPLVCDNGTGMVKAGFA-GDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELR-VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLAGRDLTDALMKILTEXSYMFTTTAEREIVRDMKEKLAYVALD 772
            ++ +V D G+ ++KAG A  D +P  V PS           + +  +D  +GD A  +  +     P+  G V +WD ME + ++  Y+ +     +E  +L TE    PKA RE++ Q+MFE FNV   Y + QAVLSLYA GR +G  +D G G     P+  G     A  R D+ G DLT+   + L + +   +   +   V  +KE+ A  A D
Sbjct:    1 MEAVVVDAGSKLLKAGIALPDQSPSLVMPS----------KMKLEVEDGQMGDGAVVEEVV----QPVVRGFVKDWDAMEDLLNYVLYSNIGWEIGDEGQILFTEPLFTPKALREQLAQLMFEKFNVSGFYDSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVCEGAVQHIASKRFDIGGTDLTNLFAEELKKSN--SSVNIDISDVERLKEQYACCAED 204          
BLAST of EY753834 vs. ExPASy Swiss-Prot
Match: ARP7_ARATH (Actin-related protein 7 OS=Arabidopsis thaliana GN=ARP7 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 5.124e-20
Identity = 76/220 (34.55%), Postives = 107/220 (48.64%), Query Frame = 2
Query:  119 IQPLVCDNGTGMVKAGFA-GDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLAGRDLTDALMKILTEXSYMFTTTAEREIVRDMKEKLAYVALD 772
            ++ LV D G+  +KAG A  D +P  + PS + R      MV  G   A   D   +    +TL  PIE G++ +WD ME +  +  Y  L      E  +L T+    PKA RE++ Q+MFETFNV   Y + QAVLSLYA GR +G  +D G G     P+  G     A  R +L G +LT    + L + +     +     V  +KE+ A  A D
Sbjct:    1 MEALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSSA---DNPTTVFEDVTLD-PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFNVSGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVLEGAVQHIASKRFELGGTELTKLFAQELGKTNPSMNLSMSD--VEKLKEQYANCAED 208          
BLAST of EY753834 vs. ExPASy Swiss-Prot
Match: ARP42_SCHPO (SWI/SNF and RSC complexes subunit arp42 OS=Schizosaccharomyces pombe GN=arp42 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.947e-19
Identity = 53/182 (29.12%), Postives = 96/182 (52.75%), Query Frame = 2
Query:  113 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGI--LTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLAG 652
            E+I  LV D G+   + G+AG+++P  + PS      + GV   +  ++ YV DE Q    I  + +K    +GI+ +W+     W      +L+V P E+ +++TE   NP++ R+++ +  FE  +VPA Y+  QAV   +A+ ++T +++D G   +   P+  G  +   I +  LAG
Sbjct:    8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPS------YYGVRSDVTGRNKYVVDELQIHAPIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQVNPTEYAMMITEPSWNPQSVRQQIMEAAFEQLHVPAFYLTKQAVCVAFANSKSTALIVDIGSDNASVTPVVDGLIIRKGIFKQSLAG 183          
BLAST of EY753834 vs. ExPASy Swiss-Prot
Match: ARP4A_ARATH (Actin-related protein 4A OS=Arabidopsis thaliana GN=ARP4A PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.262e-18
Identity = 49/136 (36.03%), Postives = 76/136 (55.88%), Query Frame = 2
Query:  101 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVG---------------MGQKDAYVGDEAQS-KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 460
            M   +++  +V D G+   KAG+AG+DAP+AVFPS+VG     G+ +                 G++  Y G +A + +R  + +  P + GIV++WD ++ +W H F N L + P EHP+LL E PLN +  REK
Sbjct:    1 MYGGDEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEKGKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136          
BLAST of EY753834 vs. ExPASy Swiss-Prot
Match: ARP6_CRYNE (Actin-like protein ARP6 OS=Cryptococcus neoformans GN=ARP6 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.648e-18
Identity = 69/233 (29.61%), Postives = 111/233 (47.64%), Query Frame = 2
Query:  128 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKY--PIEHGIVSNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVL----SLYASGR----TTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLAGRDLTDALMKILTEXSYMFTTTAEREIVRDMKEKLAYVALDYEPELET 793
            L+ DNG   +KAG +G D    V P+ + R R         +K  YVGDE  + + +  + Y  P E G++ NWD    IW   F  + L + P E  +L+TE   N     E   Q++FE F   + +    A L     LY S +       IV+D G   +H VPI  G  +   + R+D+ G+ LT+ L  +++   +      +  +V  ++E   YV+L+++ +LET
Sbjct:    7 LIIDNGAYEIKAGISGVDWEPRVLPNSIARSRT--------EKRVYVGDEIDNCKDLSGIVYRRPFEKGMLVNWDAERIIWDRLFSPSVLNINPTETSLLVTEPYFNLPNIAETYDQMIFEEFEFQSYFRCAPAALIPYGGLYESDQGIPPQCTIVIDMGYSYTHVVPIRDGQIVWEHVKRIDVGGKLLTNHLKHLISFRQW--NMIDQTHVVNSVREACGYVSLNWKGDLET 229          
BLAST of EY753834 vs. ExPASy Swiss-Prot
Match: ARP5_YEAST (Actin-related protein 5 OS=Saccharomyces cerevisiae GN=ARP5 PE=1 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.925e-17
Identity = 59/229 (25.76%), Postives = 110/229 (48.03%), Query Frame = 2
Query:  125 PLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTL-KYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE---HPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLY---ASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLAGRDLTDALMKILTEXSYMFTTTAEREIVRDMKEKLAYVALDYEPELE 790
            P+  D G+  ++AGF     P  +FP+ + + R       + +   +VG++    + + +  + P +   V+NW+  E+I  +TF++ L V P+    +P+LLTE     ++ R    QI+FET+NVP +   I ++ S Y    SG  TG+V+  G   ++ +P+  G  +     R++  G    D L  ++      F T         M +   YV+ +Y+ ++E
Sbjct:   39 PIAIDFGSSKLRAGFVNHATPTHIFPNALTKFRDRK----LNKNFTFVGNDTLLDQAVRSQSRSPFDGPFVTNWNLTEEILDYTFHH-LGVVPDNGIPNPILLTERLATVQSQRTNWYQILFETYNVPGVTFGIDSLFSFYNYNPSGNKTGLVISCGHEDTNVIPVVDGAGILTDAKRINWGGHQAVDYLNDLMALKYPYFPTKMSYLQYETMYKDYCYVSRNYDEDIE 262          
BLAST of EY753834 vs. ExPASy Swiss-Prot
Match: ARP4_ASPFU (Actin-related protein 4 OS=Aspergillus fumigatus GN=arp4 PE=3 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 6.925e-17
Identity = 61/228 (26.75%), Postives = 101/228 (44.30%), Query Frame = 2
Query:  113 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA-QSKRGILTLKYPI-EHGIVSNWDDMEKIWHHTFYNELR--------------------------VAPEE-----HPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLAGRDLTDALMKILTEXS 697
            ++I  +V D G    +AGFAG+D P++V P+  G+  +        Q+    GD+   + R  L++  P+   G+V +WD  EK+W ++F + L                           V  EE      P+L+TE   NP   REK  +I  E +  PA Y+A   VL+ +A+G+ + +V+D G       P++ G  L   +    L G  ++  L  +    S
Sbjct:    9 DEISAIVLDPGFSTTRAGFAGEDTPKSVIPTYYGKYTYE------AQEKLIFGDDIFVTPRPGLSIHNPMGRDGVVEDWDMAEKVWEYSFTSRLTGPKAGNPFQNGLNDVANGELPSEMEGVETEEKPLADSPLLMTECGWNPTKAREKTVEIAMEKWGTPAFYLARNGVLAAFAAGKASALVVDVGASNISVTPVHDGMILKRGVQHSPLGGDYISSQLRALFKTNS 230          
BLAST of EY753834 vs. ExPASy Swiss-Prot
Match: ARP11_HUMAN (Actin-related protein 11 OS=Homo sapiens GN=ARP11 PE=2 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 2.015e-16
Identity = 45/112 (40.18%), Postives = 65/112 (58.04%), Query Frame = 2
Query:  473 MFETFNVPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYXGYALPHAILRLDLAGRDLTDALMKILTEXSYMFTTTAEREIVRDMKEKLAYVALDYEPE 784
            MFE+FNVP +Y+A+QAVL+L AS  +        TGIV+DSGDGV+H +P+  GY +   I  + +AGRD+T  + ++L E           E  + +KEK  Y+  D   E
Sbjct:    1 MFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYICPDIVKE 112          
The following BLAST results are available for this feature:
BLAST of EY753834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 479
Match NameE-valueIdentityDescription
ARP4_YARLI1.348e-2029.52Actin-related protein 4 OS=Yarrowia lipolytica GN=... [more]
ARP7_ORYSJ2.300e-2032.27Actin-related protein 7 OS=Oryza sativa subsp. jap... [more]
ARP7_ORYSI2.300e-2032.27Actin-related protein 7 OS=Oryza sativa subsp. ind... [more]
ARP7_ARATH5.124e-2034.55Actin-related protein 7 OS=Arabidopsis thaliana GN... [more]
ARP42_SCHPO1.947e-1929.12SWI/SNF and RSC complexes subunit arp42 OS=Schizos... [more]
ARP4A_ARATH1.262e-1836.03Actin-related protein 4A OS=Arabidopsis thaliana G... [more]
ARP6_CRYNE1.648e-1829.61Actin-like protein ARP6 OS=Cryptococcus neoformans... [more]
ARP5_YEAST6.925e-1725.76Actin-related protein 5 OS=Saccharomyces cerevisia... [more]
ARP4_ASPFU6.925e-1726.75Actin-related protein 4 OS=Aspergillus fumigatus G... [more]
ARP11_HUMAN2.015e-1640.18Actin-related protein 11 OS=Homo sapiens GN=ARP11 ... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-007-D12-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753834 ID=EY753834; Name=EY753834; organism=Citrus sinensis; type=EST; length=896bp
CAGTACCATTTACAGAGCGATAGAGAGAATCGACACTCTCAGCTAGACTC
CATCTTCGAATTTTTCTCTCGTCGTCTCTTCAATCTAACTTTTATAAAAA
ATGGCCGATGCTGAGGATATTCAACCCCTTGTTTGTGACAATGGAACTGG
AATGGTGAAGGCTGGATTTGCTGGAGATGATGCTCCGAGGGCAGTATTCC
CTAGTATTGTTGGTAGGCCTCGACACACTGGAGTCATGGTTGGAATGGGG
CAGAAGGATGCCTATGTTGGTGATGAGGCCCAATCGAAAAGAGGTATTCT
TACTTTGAAATACCCAATTGAGCACGGTATTGTAAGCAACTGGGATGATA
TGGAAAAGATCTGGCATCATACCTTCTACAACGAGCTTCGTGTTGCTCCT
GAAGAGCACCCAGTGCTTCTCACTGAGGCACCTCTTAACCCCAAGGCCAA
CAGAGAGAAGATGACCCAAATTATGTTTGAAACTTTCAATGTGCCAGCCA
TGTACGTTGCCATCCAGGCCGTTCTATCTCTTTATGCCAGTGGTCGTACA
ACTGGTATTGTGCTGGATTCTGGTGATGGTGTGTCTCATACTGTACCAAT
CTATGANGGATATGCCCTTCCTCATGCCATTCTTCGTTTGGACTTGGCTG
GTCGTGATCTCACTGATGCATTGATGAAGATTCTTACTGAGANGAGTTAC
ATGTTTACCACCACAGCCGAACGGGAAATTGTCCGTGACATGAAGGAGAA
ACTTGCTTATGTTGCCCTAGACTATGAGCCAGAACTGGAGACTGCCNAGA
AGCAGCTCATCTGTGAGAAAACTATGAGCTGNCTGATGGCCAAACATCAC
CATGNAGCTGAAAGATCCGTGCCCAAAATTTCTGTTCAGCCATCTT
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