EY753834

Overview
NameEY753834
Unique NameEY753834
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length896
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753834 vs. ExPASy Swiss-Prot
Match: ARP7_YEAST (Actin-related protein 7 OS=Saccharomyces cerevisiae GN=ARP7 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.351e-12
Identity = 45/179 (25.14%), Postives = 83/179 (46.37%), Query Frame = 2
Query:  128 LVCDNGTGMVKAGFAGDDAPRAVFPS-IVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPK---ANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLAG 652
            +V  NG+    AGF+  + P+ + PS  + R    G    +      +   A+ + G          G+  NWD +E  W + +  +L+V+PEE P+++T    N K   A  E+  ++ F+  NVP   + I+ +    + G+++  V+D G    +  PI  G  + +A++R    G
Sbjct:    8 VVIHNGSHRTVAGFSNVELPQCIIPSSYIKRTDEGGEAEFIFGTYNMIDAAAEKRNGDEVYTLVDSQGLPYNWDALEMQWRYLYDTQLKVSPEELPLVITMPATNGKPDMAILERYYELAFDKLNVPVFQIVIEPLAIALSMGKSSAFVIDIGASGCNVTPIIDGIVVKNAVVRSKFGG 186          
BLAST of EY753834 vs. ExPASy Swiss-Prot
Match: ARP6_MOUSE (Actin-related protein 6 OS=Mus musculus GN=Actr6 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.765e-12
Identity = 57/229 (24.89%), Postives = 106/229 (46.29%), Query Frame = 2
Query:  128 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNEL-RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTG-----IVLDSGDGVSHTVPIYXGYALPHAILRLDLAGRDLTDALMKILTEXSYMFTTTAEREIVRDMKEKLAYVALDYEPELETA 796
            LV DNG    K G++ D    +V P+   R +   +      +     DE +   G+  +  P + G + NWD   ++W + F  E+ +V   +  +++TE   N  + +E M +I+FE +   A+       LS +   R        I++DSG   +H VP         AI+R+++ G+ LT+ L +I++          E  ++  +KE + YV+ D+  +++ A
Sbjct:    4 LVLDNGAYNAKIGYSHDSV--SVIPNCQFRSKTARLKTFTANQI----DEIKDPSGLFYI-LPFQKGYLVNWDVQRQVWDYLFGKEMYQVDFLDTNIIITEPYFNFTSIQESMNEILFEEYQFQAVLRVNAGALSAHRYFRDNPSELCCIIVDSGYSFTHIVPYCRSKKKKEAIIRINVGGKLLTNHLKEIISYR--QLHVMDETHVINQVKEDVCYVSQDFYRDMDIA 223          
BLAST of EY753834 vs. ExPASy Swiss-Prot
Match: ARP6_CHICK (Actin-related protein 6 OS=Gallus gallus GN=ACTR6 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.305e-12
Identity = 58/229 (25.33%), Postives = 106/229 (46.29%), Query Frame = 2
Query:  128 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNEL-RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTG-----IVLDSGDGVSHTVPIYXGYALPHAILRLDLAGRDLTDALMKILTEXSYMFTTTAEREIVRDMKEKLAYVALDYEPELETA 796
            LV DNG    K G++   A  +V P+   R +   +      +     DE +   G+  +  P + G + NWD   ++W + F  E+ +V   +  +++TE   N  + +E M +I+FE +   A+       LS +   R        I++DSG   +H VP         AI+R+++ G+ LT+ L +I++          E  ++  +KE + YV+ D+  ++E A
Sbjct:    4 LVLDNGAYNAKIGYS--HAHVSVIPNCQFRSKTARLKTFTANQL----DEIKDPSGLFYI-LPFQKGYLVNWDVQRQVWDYLFGKEMYQVDFVDTNIIITEPYFNFSSIQESMNEILFEEYQFQAVLRVNAGALSAHRYFRDNPSELCCIIVDSGYSFTHIVPYCRSKKKKEAIIRINVGGKLLTNHLKEIISYR--QLHVMDETHVINQVKEDVCYVSQDFYKDMEIA 223          
BLAST of EY753834 vs. ExPASy Swiss-Prot
Match: ARP10_MOUSE (Actin-related protein 10 OS=Mus musculus GN=Actr10 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 3.011e-12
Identity = 53/198 (26.77%), Postives = 92/198 (46.46%), Query Frame = 2
Query:  128 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLAGRDLTDALMKILTEXSYMFTTTAE 721
            +V D G    K GFAG+  PR + PS++ R                    A   + I  ++Y I    + ++  +++  H  ++  L V P +  V++ E+ L P   RE +T+++F+ F VP++ +A   +++L   G  + +VLD G   S  +PIY G  + +    L L G+ L   L   L E   + T  A+
Sbjct:   16 VVIDLGEAFTKCGFAGETGPRCIIPSVIKR--------------------AGMSKPIKVVQYNINTEELYSY--LKEFIHILYFRHLLVNPRDRRVVVIESVLCPSHFRETLTRVLFKYFEVPSVLLAPSHLMALLTLGINSAMVLDCGYRESLVLPIYEGIPILNCWGALPLGGKALHKELETQLLEQCTVDTGAAK 191          
BLAST of EY753834 vs. ExPASy Swiss-Prot
Match: ARP6_HUMAN (Actin-related protein 6 OS=Homo sapiens GN=ACTR6 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.932e-12
Identity = 56/229 (24.45%), Postives = 107/229 (46.72%), Query Frame = 2
Query:  128 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNEL-RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTG-----IVLDSGDGVSHTVPIYXGYALPHAILRLDLAGRDLTDALMKILTEXSYMFTTTAEREIVRDMKEKLAYVALDYEPELETA 796
            LV DNG    K G++ ++   +V P+   R +   +      +     DE +   G+  +  P + G + NWD   ++W + F  E+ +V   +  +++TE   N  + +E M +I+FE +   A+       LS +   R        I++DSG   +H VP         AI+R+++ G+ LT+ L +I++          E  ++  +KE + YV+ D+  +++ A
Sbjct:    4 LVLDNGAYNAKIGYSHENV--SVIPNCQFRSKTARLKTFTANQI----DEIKDPSGLFYI-LPFQKGYLVNWDVQRQVWDYLFGKEMYQVDFLDTNIIITEPYFNFTSIQESMNEILFEEYQFQAVLRVNAGALSAHRYFRDNPSELCCIIVDSGYSFTHIVPYCRSKKKKEAIIRINVGGKLLTNHLKEIISYR--QLHVMDETHVINQVKEDVCYVSQDFYRDMDIA 223          
BLAST of EY753834 vs. ExPASy Swiss-Prot
Match: ARP5_DROPS (Actin-related protein 5 OS=Drosophila pseudoobscura pseudoobscura GN=Arp5 PE=3 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.932e-12
Identity = 55/243 (22.63%), Postives = 112/243 (46.09%), Query Frame = 2
Query:  128 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHT-----------GVMVGMGQK---DAYVGDEAQSKRGILT-LKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE---HPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSL--YASGR---TTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLAGRDLTDALMKILTEXSYMFTTTAEREIVRDMKEKLAYVALDYEPEL 787
            LV DNG+   + G+     P   F +++ +PR             G    +  +   +  VG++  +   +   LK P E  I++NW+  E+I+ + F  ++    E+   +P++LTEA  NP   R+ M++++FE + +PA+   I A+ S   Y + R   +  +++  G   +H +P+  G      + RL++ G  +   L+ ++     +         +  +  +  ++A+DY  EL
Sbjct:    8 LVIDNGSYECRVGWNNTKEPALRFRNVLTKPRKDRKKEAIPDTTDGAPTPVAAEVPAEIQVGNDITNIEAVRAHLKSPFERNIITNWNHQEQIFDYIF-TKMGFEGEQSIANPIVLTEALANPNFCRQNMSELLFECYGIPAVSYGIDALYSWEHYQNRRKKVSDALIISLGYSTTHVIPVLNGKLQLQHVRRLNVGGYHIITYLLCLMQMKYPVHLNAISISRMEKLVHEHCHIAVDYREEL 249          
BLAST of EY753834 vs. ExPASy Swiss-Prot
Match: ARP10_BOVIN (Actin-related protein 10 OS=Bos taurus GN=ACTR10 PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 5.136e-12
Identity = 56/225 (24.89%), Postives = 102/225 (45.33%), Query Frame = 2
Query:  128 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLAGRDLTDALMKILTEXSYMFTTTAERE------------IVRDMKEKLAYVA 766
            +V D G    K GFAG+  PR + PS++ +                    A   + I  ++Y I    + ++  +++  H  ++  L V P +  V++ E+ L P   RE +T+++F+ F VP++ +A   +++L   G  + +VLD G   S  +PIY G  + +    L L G+ L   L   L E   + T  A+ +            I+ D+K +  +V+
Sbjct:   16 VVIDLGEAFTKCGFAGETGPRCIIPSVIKK--------------------AGMPKPIRVVQYNINTEELYSY--LKEFIHILYFRHLLVNPRDRRVVVIESVLCPSHFRETLTRVLFKYFEVPSVLLAPSHLMALLTLGINSAMVLDCGYRESLVLPIYEGIPVLNCWGALPLGGKALHKELETQLLEQCTVDTGAAKEQSLPSVMGSIPEGILEDIKVRTCFVS 218          
BLAST of EY753834 vs. ExPASy Swiss-Prot
Match: ARP8_ORYSJ (Actin-related protein 8 OS=Oryza sativa subsp. japonica GN=ARP8 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.329e-11
Identity = 50/160 (31.25%), Postives = 80/160 (50.00%), Query Frame = 2
Query:  371 TFYNELRVAPEEHPVLLT----------EAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPH-AILRLDLAGRDLTDALMKILTEXSYMFTTTAEREIVRDMKEKLAYVALDYEPELETAXKQLICE 817
            T Y  ++V P   P+++            A  + K  R+ +  ++F+  NVPA+    QAVL+LYA+ RT+GIV++ G   +  VPI+ G  +    +  +      LT  L +++ + +  F +      VR +KEKL YVA DYE E +    Q  CE
Sbjct:  188 TIYTRMQVKPSTQPIIVVLPLCHSDDTESARASRKQYRDTLYSVLFD-MNVPAVCSVDQAVLALYAAKRTSGIVVNIGFNATSIVPIFQGRVMHEIGVETVGQGALKLTGFLKELMQQRNITFESL---YTVRTIKEKLCYVAADYEAE-KRKDTQASCE 342          
BLAST of EY753834 vs. ExPASy Swiss-Prot
Match: ARP8_ORYSI (Actin-related protein 8 OS=Oryza sativa subsp. indica GN=ARP8 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.329e-11
Identity = 50/160 (31.25%), Postives = 80/160 (50.00%), Query Frame = 2
Query:  371 TFYNELRVAPEEHPVLLT----------EAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPH-AILRLDLAGRDLTDALMKILTEXSYMFTTTAEREIVRDMKEKLAYVALDYEPELETAXKQLICE 817
            T Y  ++V P   P+++            A  + K  R+ +  ++F+  NVPA+    QAVL+LYA+ RT+GIV++ G   +  VPI+ G  +    +  +      LT  L +++ + +  F +      VR +KEKL YVA DYE E +    Q  CE
Sbjct:  188 TIYTRMQVKPSTQPIIVVLPLCHSDDTESARASRKQYRDTLYSVLFD-MNVPAVCSVDQAVLALYAAKRTSGIVVNIGFNATSIVPIFQGRVMHEIGVETVGQGALKLTGFLKELMQQRNITFESL---YTVRTIKEKLCYVAADYEAE-KRKDTQASCE 342          
The following BLAST results are available for this feature:
BLAST of EY753834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 479
Match NameE-valueIdentityDescription
ARP7_YEAST1.351e-1225.14Actin-related protein 7 OS=Saccharomyces cerevisia... [more]
ARP6_MOUSE1.765e-1224.89Actin-related protein 6 OS=Mus musculus GN=Actr6 P... [more]
ARP6_CHICK2.305e-1225.33Actin-related protein 6 OS=Gallus gallus GN=ACTR6 ... [more]
ARP10_MOUSE3.011e-1226.77Actin-related protein 10 OS=Mus musculus GN=Actr10... [more]
ARP6_HUMAN3.932e-1224.45Actin-related protein 6 OS=Homo sapiens GN=ACTR6 P... [more]
ARP5_DROPS3.932e-1222.63Actin-related protein 5 OS=Drosophila pseudoobscur... [more]
ARP10_BOVIN5.136e-1224.89Actin-related protein 10 OS=Bos taurus GN=ACTR10 P... [more]
ARP8_ORYSJ3.329e-1131.25Actin-related protein 8 OS=Oryza sativa subsp. jap... [more]
ARP8_ORYSI3.329e-1131.25Actin-related protein 8 OS=Oryza sativa subsp. ind... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-007-D12-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753834 ID=EY753834; Name=EY753834; organism=Citrus sinensis; type=EST; length=896bp
CAGTACCATTTACAGAGCGATAGAGAGAATCGACACTCTCAGCTAGACTC
CATCTTCGAATTTTTCTCTCGTCGTCTCTTCAATCTAACTTTTATAAAAA
ATGGCCGATGCTGAGGATATTCAACCCCTTGTTTGTGACAATGGAACTGG
AATGGTGAAGGCTGGATTTGCTGGAGATGATGCTCCGAGGGCAGTATTCC
CTAGTATTGTTGGTAGGCCTCGACACACTGGAGTCATGGTTGGAATGGGG
CAGAAGGATGCCTATGTTGGTGATGAGGCCCAATCGAAAAGAGGTATTCT
TACTTTGAAATACCCAATTGAGCACGGTATTGTAAGCAACTGGGATGATA
TGGAAAAGATCTGGCATCATACCTTCTACAACGAGCTTCGTGTTGCTCCT
GAAGAGCACCCAGTGCTTCTCACTGAGGCACCTCTTAACCCCAAGGCCAA
CAGAGAGAAGATGACCCAAATTATGTTTGAAACTTTCAATGTGCCAGCCA
TGTACGTTGCCATCCAGGCCGTTCTATCTCTTTATGCCAGTGGTCGTACA
ACTGGTATTGTGCTGGATTCTGGTGATGGTGTGTCTCATACTGTACCAAT
CTATGANGGATATGCCCTTCCTCATGCCATTCTTCGTTTGGACTTGGCTG
GTCGTGATCTCACTGATGCATTGATGAAGATTCTTACTGAGANGAGTTAC
ATGTTTACCACCACAGCCGAACGGGAAATTGTCCGTGACATGAAGGAGAA
ACTTGCTTATGTTGCCCTAGACTATGAGCCAGAACTGGAGACTGCCNAGA
AGCAGCTCATCTGTGAGAAAACTATGAGCTGNCTGATGGCCAAACATCAC
CATGNAGCTGAAAGATCCGTGCCCAAAATTTCTGTTCAGCCATCTT
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