EY753834

Overview
NameEY753834
Unique NameEY753834
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length896
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753834 vs. ExPASy Swiss-Prot
Match: ACTC_BIOPF (Actin, cytoplasmic OS=Biomphalaria pfeifferi PE=3 SV=1)

HSP 1 Score: 421.009 bits (1081), Expect = 4.507e-117
Identity = 207/237 (87.34%), Postives = 217/237 (91.56%), Query Frame = 2
Query:  113 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLAGRDLTDALMKILTEXSYMFTTTAEREIVRDMKEKLAYVALDYEPELETAXKQLICEKT 823
            ED+  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIY GYALPHAI+RLDLAGRDLTD LMKILTE  Y FTTTAEREIVRD+KEKL YVALD+E E+ TA      EK+
Sbjct:    4 EDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMHTAATSSSLEKS 240          
BLAST of EY753834 vs. ExPASy Swiss-Prot
Match: ACTC_BIOGL (Actin, cytoplasmic OS=Biomphalaria glabrata PE=2 SV=2)

HSP 1 Score: 421.009 bits (1081), Expect = 4.507e-117
Identity = 206/237 (86.92%), Postives = 218/237 (91.98%), Query Frame = 2
Query:  113 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLAGRDLTDALMKILTEXSYMFTTTAEREIVRDMKEKLAYVALDYEPELETAXKQLICEKT 823
            ED+  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIY GYALPHAI+RLDLAGRDLTD LMKILTE  Y FTTTAEREIVRD+KEKL YVALD+E E++TA      EK+
Sbjct:    4 EDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKS 240          
BLAST of EY753834 vs. ExPASy Swiss-Prot
Match: ACTC_BIOAL (Actin, cytoplasmic OS=Biomphalaria alexandrina PE=3 SV=1)

HSP 1 Score: 421.009 bits (1081), Expect = 4.507e-117
Identity = 206/237 (86.92%), Postives = 218/237 (91.98%), Query Frame = 2
Query:  113 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLAGRDLTDALMKILTEXSYMFTTTAEREIVRDMKEKLAYVALDYEPELETAXKQLICEKT 823
            ED+  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIY GYALPHAI+RLDLAGRDLTD LMKILTE  Y FTTTAEREIVRD+KEKL YVALD+E E++TA      EK+
Sbjct:    4 EDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKS 240          
BLAST of EY753834 vs. ExPASy Swiss-Prot
Match: ACT5_XENLA (Actin, cytoplasmic type 5 OS=Xenopus laevis PE=3 SV=1)

HSP 1 Score: 421.009 bits (1081), Expect = 4.507e-117
Identity = 210/241 (87.14%), Postives = 220/241 (91.29%), Query Frame = 2
Query:  101 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLAGRDLTDALMKILTEXSYMFTTTAEREIVRDMKEKLAYVALDYEPELETAXKQLICEKT 823
            MAD E+I  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIY GYALPHAILRLDLAGRDLTD LMKILTE  Y FTTTAEREIVRD+KEKL YVALD+E E+ TA      EK+
Sbjct:    1 MAD-EEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS 240          
BLAST of EY753834 vs. ExPASy Swiss-Prot
Match: ACT5_CHICK (Actin, cytoplasmic type 5 OS=Gallus gallus PE=3 SV=1)

HSP 1 Score: 421.009 bits (1081), Expect = 4.507e-117
Identity = 210/241 (87.14%), Postives = 220/241 (91.29%), Query Frame = 2
Query:  101 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLAGRDLTDALMKILTEXSYMFTTTAEREIVRDMKEKLAYVALDYEPELETAXKQLICEKT 823
            MAD E+I  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGV+HTVPIY GYALPHAILRLDLAGRDLTD LMKILTE  Y FTTTAEREIVRD+KEKL YVALD+E E+ TA      EK+
Sbjct:    1 MAD-EEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS 240          
BLAST of EY753834 vs. ExPASy Swiss-Prot
Match: ACT2_LUMTE (Actin-2 OS=Lumbricus terrestris GN=ACT2 PE=2 SV=1)

HSP 1 Score: 421.009 bits (1081), Expect = 4.507e-117
Identity = 208/237 (87.76%), Postives = 217/237 (91.56%), Query Frame = 2
Query:  113 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLAGRDLTDALMKILTEXSYMFTTTAEREIVRDMKEKLAYVALDYEPELETAXKQLICEKT 823
            ED+  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIY GYALPHAILRLDLAGRDLTD LMKILTE  Y FTTTAEREIVRD+KEKL YVALD+E E+ TA      EK+
Sbjct:    4 EDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMNTASASSSLEKS 240          
BLAST of EY753834 vs. ExPASy Swiss-Prot
Match: ACT_MANSE (Actin, muscle OS=Manduca sexta PE=2 SV=1)

HSP 1 Score: 420.624 bits (1080), Expect = 5.886e-117
Identity = 207/237 (87.34%), Postives = 217/237 (91.56%), Query Frame = 2
Query:  113 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLAGRDLTDALMKILTEXSYMFTTTAEREIVRDMKEKLAYVALDYEPELETAXKQLICEKT 823
            +D+  LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIY GYALPHAILRLDLAGRDLTD LMKILTE  Y FTTTAEREIVRD+KEKL YVALD+E E+ TA      EK+
Sbjct:    4 DDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAAASTSLEKS 240          
BLAST of EY753834 vs. ExPASy Swiss-Prot
Match: ACTS_RAT (Actin, alpha skeletal muscle OS=Rattus norvegicus GN=Acta1 PE=2 SV=1)

HSP 1 Score: 420.624 bits (1080), Expect = 5.886e-117
Identity = 205/241 (85.06%), Postives = 218/241 (90.46%), Query Frame = 2
Query:  101 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLAGRDLTDALMKILTEXSYMFTTTAEREIVRDMKEKLAYVALDYEPELETAXKQLICEKT 823
            M D ++   LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H VPIY GYALPHAI+RLDLAGRDLTD LMKILTE  Y F TTAEREIVRD+KEKL YVALD+E E+ TA      EK+
Sbjct:    1 MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKS 241          
BLAST of EY753834 vs. ExPASy Swiss-Prot
Match: ACTS_RABIT (Actin, alpha skeletal muscle OS=Oryctolagus cuniculus GN=ACTA1 PE=1 SV=1)

HSP 1 Score: 420.624 bits (1080), Expect = 5.886e-117
Identity = 205/241 (85.06%), Postives = 218/241 (90.46%), Query Frame = 2
Query:  101 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLAGRDLTDALMKILTEXSYMFTTTAEREIVRDMKEKLAYVALDYEPELETAXKQLICEKT 823
            M D ++   LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H VPIY GYALPHAI+RLDLAGRDLTD LMKILTE  Y F TTAEREIVRD+KEKL YVALD+E E+ TA      EK+
Sbjct:    1 MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKS 241          
BLAST of EY753834 vs. ExPASy Swiss-Prot
Match: ACTS_PONAB (Actin, alpha skeletal muscle OS=Pongo abelii GN=ACTA1 PE=2 SV=1)

HSP 1 Score: 420.624 bits (1080), Expect = 5.886e-117
Identity = 205/241 (85.06%), Postives = 218/241 (90.46%), Query Frame = 2
Query:  101 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYXGYALPHAILRLDLAGRDLTDALMKILTEXSYMFTTTAEREIVRDMKEKLAYVALDYEPELETAXKQLICEKT 823
            M D ++   LVCDNG+G+VKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGI++NWDDMEKIWHHTFYNELRVAPEEHP LLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGV+H VPIY GYALPHAI+RLDLAGRDLTD LMKILTE  Y F TTAEREIVRD+KEKL YVALD+E E+ TA      EK+
Sbjct:    1 MCDEDETTALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDLTDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKS 241          
The following BLAST results are available for this feature:
BLAST of EY753834 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 479
Match NameE-valueIdentityDescription
ACTC_BIOPF4.507e-11787.34Actin, cytoplasmic OS=Biomphalaria pfeifferi PE=3 ... [more]
ACTC_BIOGL4.507e-11786.92Actin, cytoplasmic OS=Biomphalaria glabrata PE=2 S... [more]
ACTC_BIOAL4.507e-11786.92Actin, cytoplasmic OS=Biomphalaria alexandrina PE=... [more]
ACT5_XENLA4.507e-11787.14Actin, cytoplasmic type 5 OS=Xenopus laevis PE=3 S... [more]
ACT5_CHICK4.507e-11787.14Actin, cytoplasmic type 5 OS=Gallus gallus PE=3 SV... [more]
ACT2_LUMTE4.507e-11787.76Actin-2 OS=Lumbricus terrestris GN=ACT2 PE=2 SV=1[more]
ACT_MANSE5.886e-11787.34Actin, muscle OS=Manduca sexta PE=2 SV=1[more]
ACTS_RAT5.886e-11785.06Actin, alpha skeletal muscle OS=Rattus norvegicus ... [more]
ACTS_RABIT5.886e-11785.06Actin, alpha skeletal muscle OS=Oryctolagus cunicu... [more]
ACTS_PONAB5.886e-11785.06Actin, alpha skeletal muscle OS=Pongo abelii GN=AC... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-007-D12-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753834 ID=EY753834; Name=EY753834; organism=Citrus sinensis; type=EST; length=896bp
CAGTACCATTTACAGAGCGATAGAGAGAATCGACACTCTCAGCTAGACTC
CATCTTCGAATTTTTCTCTCGTCGTCTCTTCAATCTAACTTTTATAAAAA
ATGGCCGATGCTGAGGATATTCAACCCCTTGTTTGTGACAATGGAACTGG
AATGGTGAAGGCTGGATTTGCTGGAGATGATGCTCCGAGGGCAGTATTCC
CTAGTATTGTTGGTAGGCCTCGACACACTGGAGTCATGGTTGGAATGGGG
CAGAAGGATGCCTATGTTGGTGATGAGGCCCAATCGAAAAGAGGTATTCT
TACTTTGAAATACCCAATTGAGCACGGTATTGTAAGCAACTGGGATGATA
TGGAAAAGATCTGGCATCATACCTTCTACAACGAGCTTCGTGTTGCTCCT
GAAGAGCACCCAGTGCTTCTCACTGAGGCACCTCTTAACCCCAAGGCCAA
CAGAGAGAAGATGACCCAAATTATGTTTGAAACTTTCAATGTGCCAGCCA
TGTACGTTGCCATCCAGGCCGTTCTATCTCTTTATGCCAGTGGTCGTACA
ACTGGTATTGTGCTGGATTCTGGTGATGGTGTGTCTCATACTGTACCAAT
CTATGANGGATATGCCCTTCCTCATGCCATTCTTCGTTTGGACTTGGCTG
GTCGTGATCTCACTGATGCATTGATGAAGATTCTTACTGAGANGAGTTAC
ATGTTTACCACCACAGCCGAACGGGAAATTGTCCGTGACATGAAGGAGAA
ACTTGCTTATGTTGCCCTAGACTATGAGCCAGAACTGGAGACTGCCNAGA
AGCAGCTCATCTGTGAGAAAACTATGAGCTGNCTGATGGCCAAACATCAC
CATGNAGCTGAAAGATCCGTGCCCAAAATTTCTGTTCAGCCATCTT
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