EY753823

Overview
NameEY753823
Unique NameEY753823
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length759
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP1_PSEAE (Glycine dehydrogenase [decarboxylating] 1 OS=Pseudomonas aeruginosa GN=gcvP1 PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.015e-28
Identity = 78/175 (44.57%), Postives = 109/175 (62.29%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKV----KCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG-GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXF 513
            IA+R H L    A GL++LG V V+   FFDT+ +    + A  HA A AA    +NLR +D+  +  S DET    DV+ L+ + A  G+++P  AA LA      +P  L R+S  L+HP+FN++H+E EL+RY+  L  K+L+L  +MIPLGSCTMKLNA + M+PVTW  F
Sbjct:  364 IARRTHRLTAILAAGLERLG-VAVEQKHFFDTLSLATGARTAAIHAKARAA---GINLREIDAGRLGLSLDETVRQTDVETLWGLLAEEGQALPDFAA-LAASSGDRLPVELLRQSAILSHPIFNRHHSETELMRYLRKLADKDLALDRTMIPLGSCTMKLNAASEMIPVTWAEF 533          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_TERTT (Glycine dehydrogenase [decarboxylating] OS=Teredinibacter turnerae (strain ATCC 39867 / T7901) GN=gcvP PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.142e-28
Identity = 71/173 (41.04%), Postives = 105/173 (60.69%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHA-IASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVE--TAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXF 513
            IA+R+H L    + GL  LG  +++   FFDT+ ++  D    +   A    +NL  + S  ++ S  E TTL+D+  L  VFAGG+S P    SL  + +    +   L R+   L H +F++YH+E E+LRY+  L+S++++L H+MIPLGSCTMKLNAT  M+PVTWP F
Sbjct:  362 IARRIHILTKMLSEGLISLG-YKLRHTTFFDTLCIEVGDQQKPLLDRAQHARINLCAMGSGALSISLSECTTLDDLTALIAVFAGGES-PLDMPSLEAKAQQKAVLSENLLRDGRALQHEIFSQYHSETEMLRYLKRLESRDIALNHAMIPLGSCTMKLNATAEMIPVTWPEF 532          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_BRASB (Glycine dehydrogenase [decarboxylating] OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=gcvP PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.142e-28
Identity = 73/174 (41.95%), Postives = 106/174 (60.92%), Query Frame = 1
Query:    1 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKC-ADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFAT 519
            +IA+ VH  A   A GL+KLG        FFDTV V+  A+   I + A    +NL   D + +  + DETTT + V+ ++  F G  S     A++  E   A+P+ L R+ P+LTHPVF+ + +E E+LRY+  L  ++L+L  +MIPLGSCTMKLNAT  M+P+TWP F++
Sbjct:  359 SIARTVHRRAAVLAAGLRKLGFAPASD-SFFDTVLVEAGANCDEIIARAESQRINLGR-DGSRLRIALDETTTADVVEAVWRAFGGELSY----AAIEAEARDAVPAELKRQRPFLTHPVFHAHRSETEMLRYLRKLADRDLALDRAMIPLGSCTMKLNATTEMIPLTWPEFSS 526          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_PSYIN (Glycine dehydrogenase [decarboxylating] OS=Psychromonas ingrahamii (strain 37) GN=gcvP PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.716e-28
Identity = 77/178 (43.26%), Postives = 104/178 (58.43%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-AHAIASAAYKIEMNLR---VVDSNTVTA--SFDETTTLEDVDKLFIVFAG-GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA+RVH L      GL+  G  E+    FFDT+ +   + + AI   A    MNLR     D+  V    S DETTT+ DV+ L  V  G   S    AA +AE+    IP+   R S YLTHP+FN++H+E +++RY+  L++K+ SL H MIPLG CTMKLNA   M+PV+WP F+
Sbjct:  360 IARRVHHLTAILVAGLRSEG-FELANQHFFDTITLNSNEHSKAIYHRALAEGMNLRKFPTPDNMPVQLGISLDETTTITDVEDLLRVITGKALSSAGFAAQVAEDEFAGIPATCRRRSKYLTHPIFNEHHSETQMMRYMKKLENKDYSLTHGMIPLGCCTMKLNAAALMLPVSWPEFS 536          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP2_COLP3 (Glycine dehydrogenase [decarboxylating] 2 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=gcvP2 PE=3 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 8.771e-28
Identity = 74/173 (42.77%), Postives = 105/173 (60.69%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGK-SVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            + +RV+ L    A GL+K G +E+    FFDT+ ++  +   AI   A   ++NLR++    +  S DETTT  DV+ L++       +V     +L+ E    IP+   R S YL+HPVFN YH+E  +LRY+  L++K+ SL H MIPLGSCTMKLNAT  M+PVTWP F+
Sbjct:  360 MGRRVNRLTSVLAAGLQKAG-IELVHNDFFDTITLQTNEKTDAIYQRALAADLNLRLLPDQ-LGISLDETTTSADVEALWLAITEQSFNVDDIEQTLSAEF-CNIPADCQRTSEYLSHPVFNSYHSETRMLRYLKSLENKDFSLTHGMIPLGSCTMKLNATAQMIPVTWPEFS 529          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_BRASO (Glycine dehydrogenase [decarboxylating] OS=Bradyrhizobium sp. (strain ORS278) GN=gcvP PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.146e-27
Identity = 73/173 (42.20%), Postives = 104/173 (60.12%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKC-ADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFAT 519
            IA+ VH      A GL+KLG        FFDTV V+  A+A +I + A    +NL   + + +  + DETTT + V+  +  F G  S     A +  E   A+P+ L R+ PYLTHPVF+ + +E E+LRY+  L  ++L+L  +MIPLGSCTMKLNAT  M+P+TWP F++
Sbjct:  360 IARTVHRRTAVLAAGLRKLGFAPANDA-FFDTVTVEAGANASSIIARAEAERINLGH-NGSRLRIALDETTTADVVEAAWRAFGGELSY----ADIEAEARDAVPAELKRQRPYLTHPVFHAHRSETEMLRYLRKLADRDLALDRAMIPLGSCTMKLNATTEMIPLTWPEFSS 526          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_PROMH (Glycine dehydrogenase [decarboxylating] OS=Proteus mirabilis (strain HI4320) GN=gcvP PE=3 SV=1)

HSP 1 Score: 123.25 bits (308), Expect = 1.496e-27
Identity = 70/172 (40.70%), Postives = 101/172 (58.72%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPF--TAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXF 513
            IAQR+H L    A GL + G + ++   +FDT+ V+ AD   +   A   E+NLR      V  +  E TT EDV +L  + +G        T  +L     T+IP+ + R+   LTH  F+ YH+E E++RY+H L++K+L+L  +MIPLGSCTMKLNA   M+P+TWP F
Sbjct:  360 IAQRIHRLTDILAAGLIQNG-MTLRHQTWFDTLTVETADKAGVLQRAKDAEINLRTDIVGAVGVTLSEVTTREDVVRLIEIISGKAFSDDIDTLDALVASSSTSIPTAMLRKDAVLTHENFHLYHSETEMMRYMHRLENKDLALNQAMIPLGSCTMKLNAAAEMLPITWPEF 530          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_SODGM (Glycine dehydrogenase [decarboxylating] OS=Sodalis glossinidius (strain morsitans) GN=gcvP PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.552e-27
Identity = 71/171 (41.52%), Postives = 97/171 (56.73%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA R+H L    A GL     + ++   +FDT+ V+  D   + + A    +NLR      V  + DETT  EDV  L+ V  G         +L    +  IP  L R +P LTH VFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA   M+P+TWP FA
Sbjct:  360 IAGRIHRLTTILAQGLHD-ADLTLRHDRWFDTLTVEVVDKAGVLARANAAGINLRSDIHGAVGITLDETTVREDVQTLWQVVTGAAGT-LAIDALDAGCDEVIPPELLRATPILTHEVFNRYHSETEMMRYMHRLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFA 528          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_STRAW (Glycine dehydrogenase [decarboxylating] OS=Streptomyces avermitilis GN=gcvP PE=3 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 7.425e-27
Identity = 74/172 (43.02%), Postives = 99/172 (57.56%), Query Frame = 1
Query:    1 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHA-IASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXF 513
            TIA+R H  A   A GLK  G VEV    +FDT+  +     A I +AA +  +NL +VD++ V+ S DETTT   +  ++  F     V     +L    E  +P+ L R   YLTHPVF++Y +E  +LRY+  L  ++ +L   MIPLGSCTMKLNAT  M PVTWP F
Sbjct:  365 TIARRTHRYATILAEGLKA-GGVEVVHGAYFDTLTARVPGRAAEIVAAAREGGVNLHLVDADLVSISCDETTTRAQLGAVWTAFG----VEGDIEALDAAAEDTLPAALLRTDDYLTHPVFHQYRSETAMLRYLRRLSDRDYALDRGMIPLGSCTMKLNATTEMEPVTWPEF 531          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_CHICK (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Gallus gallus GN=GLDC PE=1 SV=2)

HSP 1 Score: 120.939 bits (302), Expect = 7.425e-27
Identity = 65/172 (37.79%), Postives = 97/172 (56.40%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCA-DAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA+RVH      A GL++ G      L FFDT+ V C      +   A   ++N+R+     +  S DET   +D+D +  +F    S    A  + EE +  + +   R S +LTH VFN YH+E  ++RY+  L++K++SL HSMIPLGSCTMKLN++  + P++W  FA
Sbjct:  391 IARRVHNATLILAEGLRRAGHKLHHDL-FFDTLTVTCGCSVKEVLDRAALRKINVRIYSDGRLGVSLDETVNEKDLDDILWIFGCESSAELVAEGMGEETKGILSTPFKRTSKFLTHQVFNSYHSETNIVRYMKRLENKDISLVHSMIPLGSCTMKLNSSAELAPISWKEFA 561          
The following BLAST results are available for this feature:
BLAST of EY753823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 252
Match NameE-valueIdentityDescription
GCSP1_PSEAE3.015e-2844.57Glycine dehydrogenase [decarboxylating] 1 OS=Pseud... [more]
GCSP_TERTT5.142e-2841.04Glycine dehydrogenase [decarboxylating] OS=Teredin... [more]
GCSP_BRASB5.142e-2841.95Glycine dehydrogenase [decarboxylating] OS=Bradyrh... [more]
GCSP_PSYIN6.716e-2843.26Glycine dehydrogenase [decarboxylating] OS=Psychro... [more]
GCSP2_COLP38.771e-2842.77Glycine dehydrogenase [decarboxylating] 2 OS=Colwe... [more]
GCSP_BRASO1.146e-2742.20Glycine dehydrogenase [decarboxylating] OS=Bradyrh... [more]
GCSP_PROMH1.496e-2740.70Glycine dehydrogenase [decarboxylating] OS=Proteus... [more]
GCSP_SODGM2.552e-2741.52Glycine dehydrogenase [decarboxylating] OS=Sodalis... [more]
GCSP_STRAW7.425e-2743.02Glycine dehydrogenase [decarboxylating] OS=Strepto... [more]
GCSP_CHICK7.425e-2737.79Glycine dehydrogenase [decarboxylating], mitochond... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-007-C11-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753823 ID=EY753823; Name=EY753823; organism=Citrus sinensis; type=EST; length=759bp
ACCATTGCTCAAAGAGTCCATGGACTAGCCGGGACTTTCGCCCTTGGGTT
AAAAAAGCTGGGGACAGTGGAAGTCCAGGGGCTTCCCTTCTTTGACACTG
TGAAGGTGAAGTGTGCGGATGCACATGCCATTGCCAGTGCTGCTTACAAG
ATTGAAATGAATCTTCGGGTTGTAGATTCCAACACCGTCACTGCTTCCTT
TGATGAAACAACCACCTTGGAGGATGTTGATAAGCTTTTCATAGTTTTCG
CTGGGGGCAAATCAGTTCCATTCACTGCTGCATCTCTGGCTGAAGAGGTT
GAGACTGCAATTCCGTCTGGATTAACAAGGGAGAGTCCGTATCTGACACA
TCCTGTTTTTAACAAATACCACACAGAGCATGAATTGCTTAGATACATTC
ATCTGTTACAATCAAAGGAGCTCTCACTATGCCATAGTATGATTCCATTG
GGATCTTGTACAATGAAATTGAATGCAACAAACTGAATGATGCCAGTGAC
ATGGCCTANCTTTGCTACATACACCCTTTTGCCCCTGCTGACCAGGCTCA
GGNTTATCANGAAATGTTTACAATCTGGGTGAGTGGCTGTGTACCATTAC
TGGGGCTTGACTCTTCTCTTGCACCAAATGCNTGTGCANCTGGTGAGTAT
GCTGGGCTCATGGNTATCCGCGCTTATCATAAGGCAAGAGAGACATCACG
GNATGTGGCATTATACCGTGTCAGCCATGGAACATNCTGCTCTGCTGCCA
TGTTGGATG
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