EY753823

Overview
NameEY753823
Unique NameEY753823
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length759
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_STRGG (Glycine dehydrogenase [decarboxylating] OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=gcvP PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 9.698e-27
Identity = 70/172 (40.70%), Postives = 100/172 (58.14%), Query Frame = 1
Query:    1 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKC-ADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXF 513
            TIA+R H  A   A GL+  G   V G  FFDT+ V+    A  I + A +  +NLR+VD++ V+ + DETTT   +  ++  F     +    A++A+    A+P GL R    LTHPVF+++ +E  +LRY+  L  ++ +L   MIPLGSCTMKLNAT  M  +TWP F
Sbjct:  365 TIARRTHRFAAILADGLRSAGVDVVHGA-FFDTLTVRVPGKAAGIVAEARERGVNLRLVDADHVSIACDETTTRSQISAVWAAFGAEGDIEALDAAVAD----ALPEGLLRSDDILTHPVFHQHRSETAMLRYLRKLADRDYALDRGMIPLGSCTMKLNATAEMESITWPEF 531          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_NITHX (Glycine dehydrogenase [decarboxylating] OS=Nitrobacter hamburgensis (strain X14 / DSM 10229) GN=gcvP PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 9.698e-27
Identity = 71/172 (41.28%), Postives = 99/172 (57.56%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADA-HAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA+ VH    T A GL +LG   +    F DT+ V   D  + IA  A    +NLR+   +T+  + DE TT E V+ ++  F       F+ A +       +P+ L R + YLTHPVF+ + +E ELLRY+  L  ++L+L  +MIPLGSCTMKLNAT  M+P+TWP FA
Sbjct:  360 IARTVHRRTATLAAGLTRLGFAPLNDAAF-DTLTVSVGDRQNEIAGRALSQGINLRINADHTLGIALDELTTPEIVEAVWRTFGAA----FSYADVEAHAPDLLPADLGRRTAYLTHPVFHAHRSETELLRYMRKLSDRDLALDRAMIPLGSCTMKLNATTEMIPLTWPAFA 526          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_RHIL3 (Glycine dehydrogenase [decarboxylating] OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=gcvP PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 1.267e-26
Identity = 75/172 (43.60%), Postives = 96/172 (55.81%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHA-IASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IAQ+VH  A   A GL+KLG  +V+   FFDT+ V        I  AA    +NLR V    +  S DE T    ++ ++  F G     FT A    E    +P GL R S YLTHP+F+    E E+ RYI  L  ++L+L  SMIPLGSCTMKLNAT  M+P+TWP F+
Sbjct:  363 IAQQVHQKAVLMAKGLEKLG-YKVEPETFFDTITVDVGHMQGLILRAAVAEGVNLRKVGETKIGMSLDERTRPATLEAVWRAFGGN----FTIADF--EPSYRLPKGLLRTSDYLTHPIFHMNRAESEMTRYIRRLSDRDLALDRSMIPLGSCTMKLNATAEMLPITWPEFS 527          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_VARPS (Glycine dehydrogenase [decarboxylating] OS=Variovorax paradoxus (strain S110) GN=gcvP PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.654e-26
Identity = 74/172 (43.02%), Postives = 97/172 (56.40%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IAQRV  L    A GL ++G   V G  F D++ ++  D    I   A    +NLR      +  S DETTT  D++ L+ +F    +       LA  V   +P  L R S +LTHPVFN + +E  +LRYI  L  K+L+L  SMIPLGSCTMKLNAT+ M+P+TWP FA
Sbjct:  367 IAQRVAALTAILAQGLAQMGREPVNGTAF-DSLTIRTGDDTPKIIERAQAAGVNLRQRLQQHLGISLDETTTRADIETLWALFVPAGTPMPRFDDLANAVPR-LPEDLRRTSAFLTHPVFNTHKSETAMLRYIRSLSDKDLALDRSMIPLGSCTMKLNATSEMIPITWPEFA 536          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_LEPIN (Glycine dehydrogenase [decarboxylating] OS=Leptospira interrogans GN=gcvP PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.654e-26
Identity = 70/171 (40.94%), Postives = 94/171 (54.97%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKC-ADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXF 513
            IA R++     FA  LK  G   +    FFDT+ ++  A    I + AY  ++N R      +  + DET  LED+  L  +F     +  T         + +P    R++ YLTHPVF  +HTE ++LRYI  L+S++LSL  SMIPLGSCTMKLNAT  M PVTWP F
Sbjct:  370 IATRIYKFTSIFANVLKNAG-FSITNEFFFDTITIQAGAKVQEILNRAYSKKINFREYKDGKIGITLDETVNLEDLKDLLEIF----EIKNTDIEKLFVDVSNVPDSFKRKTSYLTHPVFQSHHTETKMLRYIRKLESRDLSLTTSMIPLGSCTMKLNATTEMYPVTWPEF 535          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_GRAFK (Glycine dehydrogenase [decarboxylating] OS=Gramella forsetii (strain KT0803) GN=gcvP PE=3 SV=1)

HSP 1 Score: 119.783 bits (299), Expect = 1.654e-26
Identity = 73/168 (43.45%), Postives = 101/168 (60.12%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWP 507
            IA  VH  A +    LK+LG  ++    +FDT+ VK A+A  + + A K E+N    D+ +   S +ETTT +D++ +  VFA              E  TAIP  L R++ +LTH VFN YH+E EL+RYI  L+ K+LSL HSMI LGSCTMKLNA + M+P++ P
Sbjct:  356 IANIVHASAVSLEDSLKELGFEQLNSA-YFDTIHVK-ANASKLKAIAEKHEINFFYPDAESACISINETTTTDDLNAVIAVFAELSEKKHAEIEELSE-RTAIPKNLERKTEFLTHEVFNLYHSETELMRYIKKLERKDLSLNHSMISLGSCTMKLNAASEMLPLSNP 520          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_RHILO (Glycine dehydrogenase [decarboxylating] OS=Rhizobium loti GN=gcvP PE=3 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.160e-26
Identity = 77/172 (44.77%), Postives = 101/172 (58.72%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKC-ADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA R+H LA   A GLK  G V V G   FDTV V+    A  IA AA K    LRV+D++ V  +FDET+T  D+D +  +F G K+ P          ++ +P G  R   +LT PVFN+  +E +++R +  L  K+L+L  SMIPLGSCTMKLNA   MMPV+WP  A
Sbjct:  349 IAGRIHALANRLASGLKAAG-VSVLGASRFDTVTVEAKGKAAEIAEAAEKTGRLLRVLDADHVGIAFDETSTDADLDAIASLF-GAKAAP--------SADSTVP-GKPRGKEFLTQPVFNENKSETDMMRLLRRLADKDLALDRSMIPLGSCTMKLNAAAEMMPVSWPSIA 509          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_BORPD (Glycine dehydrogenase [decarboxylating] OS=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) GN=gcvP PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.685e-26
Identity = 75/175 (42.86%), Postives = 96/175 (54.86%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAH-AIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETA---IPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA RVH         L +LG ++V    FFDT+ ++   A  AI  AA    +NLR VD   +  S DET T  D+  L  VFA G      A  +      A   IP+ L R+   L HPVF+   +E ++LRY+  L  K+L+L  SMIPLGSCTMKLNAT  M+P+TWP FA
Sbjct:  354 IATRVHRYTAILRAALTQLG-IKVVNDTFFDTLLLETGVATPAIVEAAVCEHINLRRVDGARLAVSLDETVTAADLQALVNVFAAGLQKDDLALDIDAHDAAAPGGIPAALQRQGGILAHPVFSSIQSETDMLRYLRKLADKDLALDRSMIPLGSCTMKLNATAEMIPITWPEFA 527          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_LEPIC (Glycine dehydrogenase [decarboxylating] OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=gcvP PE=3 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 4.813e-26
Identity = 69/171 (40.35%), Postives = 93/171 (54.39%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXF 513
            IA R++     FA  LK  G   +    FFDT+ ++       I + AY  ++N R      +  + DET  LED+  L  +F     +  T         + +P    R++ YLTHPVF  +HTE ++LRYI  L+S++LSL  SMIPLGSCTMKLNAT  M PVTWP F
Sbjct:  370 IATRIYKFTSIFANVLKNAG-FSITNEFFFDTITIQAGTKVQEILNRAYSKKINFREYKDGKIGITLDETVNLEDLKDLLEIF----EIKNTDIEKLFVDVSNVPDSFKRKTSYLTHPVFQSHHTETKMLRYIRKLESRDLSLTTSMIPLGSCTMKLNATTEMYPVTWPEF 535          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_RHILW (Glycine dehydrogenase [decarboxylating] OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=gcvP PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 8.210e-26
Identity = 74/172 (43.02%), Postives = 95/172 (55.23%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHA-IASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IAQ+VH  A   A GL+KLG  +V+   FFDT+ V        I  AA    +NLR V    +  S DE T    ++ ++  F G     F  A    E    +P GL R S YLTHP+F+    E E+ RYI  L  ++L+L  SMIPLGSCTMKLNAT  M+P+TWP F+
Sbjct:  363 IAQQVHQKAVLMAKGLEKLG-YKVEPESFFDTITVDVGHMQGLILRAAVAEGVNLRKVGDTHIGMSLDERTRPATLEAVWRAFGGN----FKIADF--EPSYRLPKGLLRTSDYLTHPIFHMNRAESEMTRYIRRLSDRDLALDRSMIPLGSCTMKLNATAEMLPITWPEFS 527          
The following BLAST results are available for this feature:
BLAST of EY753823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 252
Match NameE-valueIdentityDescription
GCSP_STRGG9.698e-2740.70Glycine dehydrogenase [decarboxylating] OS=Strepto... [more]
GCSP_NITHX9.698e-2741.28Glycine dehydrogenase [decarboxylating] OS=Nitroba... [more]
GCSP_RHIL31.267e-2643.60Glycine dehydrogenase [decarboxylating] OS=Rhizobi... [more]
GCSP_VARPS1.654e-2643.02Glycine dehydrogenase [decarboxylating] OS=Variovo... [more]
GCSP_LEPIN1.654e-2640.94Glycine dehydrogenase [decarboxylating] OS=Leptosp... [more]
GCSP_GRAFK1.654e-2643.45Glycine dehydrogenase [decarboxylating] OS=Gramell... [more]
GCSP_RHILO2.160e-2644.77Glycine dehydrogenase [decarboxylating] OS=Rhizobi... [more]
GCSP_BORPD3.685e-2642.86Glycine dehydrogenase [decarboxylating] OS=Bordete... [more]
GCSP_LEPIC4.813e-2640.35Glycine dehydrogenase [decarboxylating] OS=Leptosp... [more]
GCSP_RHILW8.210e-2643.02Glycine dehydrogenase [decarboxylating] OS=Rhizobi... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-007-C11-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753823 ID=EY753823; Name=EY753823; organism=Citrus sinensis; type=EST; length=759bp
ACCATTGCTCAAAGAGTCCATGGACTAGCCGGGACTTTCGCCCTTGGGTT
AAAAAAGCTGGGGACAGTGGAAGTCCAGGGGCTTCCCTTCTTTGACACTG
TGAAGGTGAAGTGTGCGGATGCACATGCCATTGCCAGTGCTGCTTACAAG
ATTGAAATGAATCTTCGGGTTGTAGATTCCAACACCGTCACTGCTTCCTT
TGATGAAACAACCACCTTGGAGGATGTTGATAAGCTTTTCATAGTTTTCG
CTGGGGGCAAATCAGTTCCATTCACTGCTGCATCTCTGGCTGAAGAGGTT
GAGACTGCAATTCCGTCTGGATTAACAAGGGAGAGTCCGTATCTGACACA
TCCTGTTTTTAACAAATACCACACAGAGCATGAATTGCTTAGATACATTC
ATCTGTTACAATCAAAGGAGCTCTCACTATGCCATAGTATGATTCCATTG
GGATCTTGTACAATGAAATTGAATGCAACAAACTGAATGATGCCAGTGAC
ATGGCCTANCTTTGCTACATACACCCTTTTGCCCCTGCTGACCAGGCTCA
GGNTTATCANGAAATGTTTACAATCTGGGTGAGTGGCTGTGTACCATTAC
TGGGGCTTGACTCTTCTCTTGCACCAAATGCNTGTGCANCTGGTGAGTAT
GCTGGGCTCATGGNTATCCGCGCTTATCATAAGGCAAGAGAGACATCACG
GNATGTGGCATTATACCGTGTCAGCCATGGAACATNCTGCTCTGCTGCCA
TGTTGGATG
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