EY753823

Overview
NameEY753823
Unique NameEY753823
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length759
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_SYNS9 (Glycine dehydrogenase [decarboxylating] OS=Synechococcus sp. (strain CC9902) GN=gcvP PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.072e-25
Identity = 77/180 (42.78%), Postives = 102/180 (56.67%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTA-------SFDETTTLEDVDKLF--IVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA+R+ GL   F  GL+ L  V V+    FDTV V    A A+ +AA +   NLRV+      +       SFDE +  ++V  L   +  A GK V    AS A     ++PS   R  P+LT P F++Y +E EL+RYI  L S++LSL H MIPLGSCTMKLNA   ++PV+WP FA
Sbjct:  353 IAERLVGLRLQFEAGLRTLD-VAVEEADRFDTVTVTTTHAPAVHAAAAEAGFNLRVLPDGVPASQATGFGVSFDEFSDQKEVAHLLEAVARAVGKPVSTAPASAANTALLSLPS---RIRPWLTQPAFHRYRSETELMRYIQRLVSRDLSLVHGMIPLGSCTMKLNAAAELLPVSWPEFA 528          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_RHOFA (Glycine dehydrogenase [decarboxylating] (Fragment) OS=Rhodococcus fascians GN=gcvP PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.072e-25
Identity = 71/172 (41.28%), Postives = 94/172 (54.65%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADA-HAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA+RV+  A T A GL+  G ++V    FFDTV      A H +  AA +  +NLR VD + V  + DE TT   +  +   F    + P   +         +P+   R S YLTHP F +Y TE  +LRY+  L  K+++L  SMIPLGSCTMKLNAT  M  +TWP FA
Sbjct:  364 IARRVNTRARTVAAGLQAAG-IDVVHAEFFDTVLAAVPGAAHTVVDAAKQRGINLRPVDDDHVAIACDEATTEAHIVDVLAAFGAEPAGPGAES---------VPADCARTSEYLTHPAFTRYRTETAMLRYLRALSDKDIALDRSMIPLGSCTMKLNATAEMESITWPQFA 525          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_RHIE6 (Glycine dehydrogenase [decarboxylating] OS=Rhizobium etli (strain CIAT 652) GN=gcvP PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.072e-25
Identity = 73/172 (42.44%), Postives = 95/172 (55.23%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHA-IASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IAQ+VH  A   A GL+KLG  +V+   FFDT+ V        I  AA    +NLR V    +  S DE T    ++ ++  F G     FT A    E    +P GL R + YL HP+F+    E E+ RYI  L  ++L+L  SMIPLGSCTMKLNAT  M+P+TWP F+
Sbjct:  363 IAQQVHQKAVLMAKGLEKLG-YKVEPESFFDTITVDVGHMQGLILRAAVAEGVNLRKVGETKIGMSLDERTRPATLEAVWRAFGGN----FTIADF--EPSYLLPKGLLRTTDYLAHPIFHMNRAESEMTRYIRRLSDRDLALDRSMIPLGSCTMKLNATAEMLPITWPEFS 527          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_LEPBL (Glycine dehydrogenase [decarboxylating] OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=gcvP PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.072e-25
Identity = 71/171 (41.52%), Postives = 90/171 (52.63%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKC-ADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXF 513
            IA R+H      A  LK  G   +    FFDT+ ++  A A  I + A    +NLR      +  + DET   +D+  LF +F     V  T           I     R + YLTHPVF  +HTE ++LRYI  L+S++LSL  SMIPLGSCTMKLNAT  M PVTWP F
Sbjct:  370 IATRIHKFTSILADALKSSGFT-ISNDTFFDTITIQAGAKAKDILNRARSERINLREYKDGRIGIALDETVNSDDIKDLFKIF----EVKNTDIEKLFSNSGNISDSFKRSTSYLTHPVFQSFHTETKMLRYIRKLESRDLSLTTSMIPLGSCTMKLNATTEMYPVTWPEF 535          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_LEPBJ (Glycine dehydrogenase [decarboxylating] OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=gcvP PE=3 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.072e-25
Identity = 71/171 (41.52%), Postives = 90/171 (52.63%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKC-ADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXF 513
            IA R+H      A  LK  G   +    FFDT+ ++  A A  I + A    +NLR      +  + DET   +D+  LF +F     V  T           I     R + YLTHPVF  +HTE ++LRYI  L+S++LSL  SMIPLGSCTMKLNAT  M PVTWP F
Sbjct:  370 IATRIHKFTSILADALKSSGFT-ISNDTFFDTITIQAGAKAKDILNRARSERINLREYKDGRIGIALDETVNSDDIKDLFKIF----EVKNTDIEKLFSNSGNISDSFKRSTSYLTHPVFQSFHTETKMLRYIRKLESRDLSLTTSMIPLGSCTMKLNATTEMYPVTWPEF 535          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_BRAJA (Glycine dehydrogenase [decarboxylating] OS=Bradyrhizobium japonicum GN=gcvP PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.829e-25
Identity = 71/173 (41.04%), Postives = 99/173 (57.23%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHA-IASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFAT 519
            IA++VH  A   A GL+KLG        FFDT+ V      A I + A   ++NL V ++  +  + DETTT   V+ ++  F G        A L      A+P  L R + +LTHPVF+ + +E E+LRY+  L  ++L+L  +MIPLGSCTMKLNAT  MMP+TWP F +
Sbjct:  360 IARQVHRRAAVLAAGLRKLGFAPHSD-SFFDTLSVDAGAKRAEIVARAAAEKINLGVGET-ALRIALDETTTPATVEAVWRAFGG----QLAYAELDATTREALPEALKRTTAFLTHPVFHAHRSETEMLRYMRKLSDRDLALDRAMIPLGSCTMKLNATTEMMPLTWPEFGS 526          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_RHIEC (Glycine dehydrogenase [decarboxylating] OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=gcvP PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 4.074e-25
Identity = 72/172 (41.86%), Postives = 95/172 (55.23%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHA-IASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IAQ+VH  A   A GL+KLG  +V+   FFDT+ V        I  AA    +NLR V    +  S DE T    ++ ++  F G     FT A    E    +P  L R S YL+HP+F+    E E+ RYI  L  ++L+L  +MIPLGSCTMKLNAT  M+P+TWP F+
Sbjct:  363 IAQQVHQKAVLMAKGLEKLG-YKVEPESFFDTITVDVGHMQGLILRAAVAEGVNLRKVGETKIGMSLDERTRPATLEAVWRAFGGN----FTIADF--EPSYRLPKALLRTSEYLSHPIFHMNRAESEMTRYIRRLSDRDLALDRAMIPLGSCTMKLNATAEMLPITWPEFS 527          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_YEAST (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Saccharomyces cerevisiae GN=GCV2 PE=1 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.321e-25
Identity = 67/176 (38.07%), Postives = 100/176 (56.82%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTV-EVQGLPFFDTVKVKCADA----HAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            I++R+  L    A  ++      E+    +FDT+ +K  +       +  A  +  +NL  VD+ T++ + DETTT  DV+ L  VF    S  F    L+E+   + P    R    L + VF+ +H+E  +LRY+H LQS++LSL +SMIPLGSCTMKLN+T  MMP+TWP F+
Sbjct:  425 ISRRIFSLTSILANAIENDSCPHELINKTWFDTLTIKLGNGISSEQLLDKALKEFNINLFAVDTTTISLALDETTTKADVENLLKVFDIENSSQF----LSEDYSNSFPREFQRTDEILRNEVFHMHHSETAMLRYLHRLQSRDLSLANSMIPLGSCTMKLNSTVEMMPITWPQFS 596          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_PSYCK (Glycine dehydrogenase [decarboxylating] OS=Psychrobacter cryohalolentis (strain K5) GN=gcvP PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.321e-25
Identity = 69/176 (39.20%), Postives = 96/176 (54.55%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGL--PFFDTVKVKCAD---AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA R+H  A  FA  +K      +  L   FFD+V V C     A  I   A  +  NL  +    ++ +F ET+  +D + L  +F         A  L E+   ++ S   R    L+HPVFN +HTEHE+LRY+  L+ K+L++  SMI LGSCTMKLNAT+ M+P+TWP FA
Sbjct:  365 IATRIHAFATAFADVIKNANDSNLNVLHDQFFDSVVVDCGSEKLASQIFQNADNVGYNLWRLGETKLSVAFSETSDQKDFNVLTQLFVT------KAHDLPEDARVSLDSAHLRTDAILSHPVFNSHHTEHEMLRYLKSLEDKDLAMNRSMISLGSCTMKLNATSEMLPITWPEFA 534          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_PELUB (Glycine dehydrogenase [decarboxylating] OS=Pelagibacter ubique GN=gcvP PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.321e-25
Identity = 72/172 (41.86%), Postives = 96/172 (55.81%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA+ V  L   FA  LK+ G  E+    FFDTV +K  D    I   A    +N+R V+S  +  SFDE   L   ++L  +F   +++  T      E  + IP  L R S YL HPVFN YH+E E+LRY+  L+  +++L  SMI LGSCTMKLNA   M+PVTW  F+
Sbjct:  353 IAESVSQLTKNFADKLKQSG-YELYSNEFFDTVTIKTLDKTEKIYKNALDQGVNIRKVNSEMLAVSFDERKNLYRANQLLKIFNCSETIKETM----NESLSNIPKNLLRTSTYLDHPVFNSYHSETEMLRYLKKLEDSDIALNKSMIALGSCTMKLNAVAEMIPVTWKEFS 519          
The following BLAST results are available for this feature:
BLAST of EY753823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 252
Match NameE-valueIdentityDescription
GCSP_SYNS91.072e-2542.78Glycine dehydrogenase [decarboxylating] OS=Synecho... [more]
GCSP_RHOFA1.072e-2541.28Glycine dehydrogenase [decarboxylating] (Fragment)... [more]
GCSP_RHIE61.072e-2542.44Glycine dehydrogenase [decarboxylating] OS=Rhizobi... [more]
GCSP_LEPBL1.072e-2541.52Glycine dehydrogenase [decarboxylating] OS=Leptosp... [more]
GCSP_LEPBJ1.072e-2541.52Glycine dehydrogenase [decarboxylating] OS=Leptosp... [more]
GCSP_BRAJA1.829e-2541.04Glycine dehydrogenase [decarboxylating] OS=Bradyrh... [more]
GCSP_RHIEC4.074e-2541.86Glycine dehydrogenase [decarboxylating] OS=Rhizobi... [more]
GCSP_YEAST5.321e-2538.07Glycine dehydrogenase [decarboxylating], mitochond... [more]
GCSP_PSYCK5.321e-2539.20Glycine dehydrogenase [decarboxylating] OS=Psychro... [more]
GCSP_PELUB5.321e-2541.86Glycine dehydrogenase [decarboxylating] OS=Pelagib... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-007-C11-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753823 ID=EY753823; Name=EY753823; organism=Citrus sinensis; type=EST; length=759bp
ACCATTGCTCAAAGAGTCCATGGACTAGCCGGGACTTTCGCCCTTGGGTT
AAAAAAGCTGGGGACAGTGGAAGTCCAGGGGCTTCCCTTCTTTGACACTG
TGAAGGTGAAGTGTGCGGATGCACATGCCATTGCCAGTGCTGCTTACAAG
ATTGAAATGAATCTTCGGGTTGTAGATTCCAACACCGTCACTGCTTCCTT
TGATGAAACAACCACCTTGGAGGATGTTGATAAGCTTTTCATAGTTTTCG
CTGGGGGCAAATCAGTTCCATTCACTGCTGCATCTCTGGCTGAAGAGGTT
GAGACTGCAATTCCGTCTGGATTAACAAGGGAGAGTCCGTATCTGACACA
TCCTGTTTTTAACAAATACCACACAGAGCATGAATTGCTTAGATACATTC
ATCTGTTACAATCAAAGGAGCTCTCACTATGCCATAGTATGATTCCATTG
GGATCTTGTACAATGAAATTGAATGCAACAAACTGAATGATGCCAGTGAC
ATGGCCTANCTTTGCTACATACACCCTTTTGCCCCTGCTGACCAGGCTCA
GGNTTATCANGAAATGTTTACAATCTGGGTGAGTGGCTGTGTACCATTAC
TGGGGCTTGACTCTTCTCTTGCACCAAATGCNTGTGCANCTGGTGAGTAT
GCTGGGCTCATGGNTATCCGCGCTTATCATAAGGCAAGAGAGACATCACG
GNATGTGGCATTATACCGTGTCAGCCATGGAACATNCTGCTCTGCTGCCA
TGTTGGATG
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