EY753823

Overview
NameEY753823
Unique NameEY753823
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length759
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_PSYA2 (Glycine dehydrogenase [decarboxylating] OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=gcvP PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.950e-25
Identity = 70/176 (39.77%), Postives = 96/176 (54.55%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLG--TVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA R+H  A  FA  +K      + V    FFD+V + C     A  I   A  +  NL  +  + ++ +F ET+  ED   L  +F         A  L E+   ++ S   R    LTHPVFN +HTEHE+LRY+  L+ K+L++  SMI LGSCTMKLNAT+ M+P+TWP FA
Sbjct:  365 IATRIHAFATAFADVIKNANDSNLNVVHDQFFDSVVIDCGSEKLATQIFENADNVGYNLWRLGDSKLSVAFSETSDQEDFKILTQLFVT------KAHDLPEDARISLDSTHLRTDDILTHPVFNSHHTEHEMLRYLKSLEDKDLAMNRSMISLGSCTMKLNATSEMLPITWPEFA 534          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_STRCO (Glycine dehydrogenase [decarboxylating] OS=Streptomyces coelicolor GN=gcvP PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 9.077e-25
Identity = 72/171 (42.11%), Postives = 96/171 (56.14%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXF 513
            IA+R H  A   A GL   G VE+    +FDTV  +    A  I  AA +  +NLR+VD++ V+ + DETTT   V  ++  F     V     SL  E    +P  L R   +LTHPVF+++ +E  +LRY+  L  ++ +L   MIPLGSCTMKLNAT  M PVTWP F
Sbjct:  366 IARRTHRYATITAAGLAA-GGVEIVHGSYFDTVTARVPGRAAGIVHAARENGINLRLVDADHVSFACDETTTRAQVGGVWHAFG----VEGDIESLDAEAGETLPEALLRTDDFLTHPVFHQHRSETAMLRYLRRLADRDYALDRGMIPLGSCTMKLNATTEMEPVTWPEF 531          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_BACFR (Glycine dehydrogenase [decarboxylating] OS=Bacteroides fragilis GN=gcvP PE=3 SV=1)

HSP 1 Score: 114.005 bits (284), Expect = 9.077e-25
Identity = 71/173 (41.04%), Postives = 94/173 (54.34%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXF 513
            IA R+H +       + KLG  +V    +FDT++    D   A  I + A   E+NLR  D+  V  S DETT +   + L  +FA      F       E  T I   L R++PYLTH VF+KYHTE E++RYI  L  K++SL  SMI LGSCTMKLNA   M+P++   F
Sbjct:  356 IASRIHSITVFLEKSISKLGFKQVNK-QYFDTLRFILPDSVSAQQIRTIALSKEVNLRYFDNGDVGLSIDETTDVAAANILLSIFAIAAGKDFQKVDDIPEA-TIISEELKRQTPYLTHEVFSKYHTETEMMRYIKRLDRKDISLAQSMISLGSCTMKLNAAAEMLPLSCAEF 526          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_AGRT5 (Glycine dehydrogenase [decarboxylating] OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=gcvP PE=3 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.185e-24
Identity = 69/173 (39.88%), Postives = 97/173 (56.07%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLG-TVEVQGLPFFDTVKVKCADAHAIASAAYKIE-MNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IAQ+ H  A   A GL+KLG T+E +   FFDT+ V+      +   +   E +NLR V +  +  S DE T    ++ ++  F G  S+         E +  +P  L R S Y+THP+F+    E E+ RYI  L  ++L+L  SMIPLGSCTMKLNAT  M+P+TWP F+
Sbjct:  363 IAQQTHQKAVLMAKGLEKLGYTIEPE--TFFDTITVEVGHMQGVILRSAVAEGVNLRKVGATKIGMSLDERTRPATLEAVWRAFGGNFSISDF------EPDYRLPKDLLRTSQYMTHPIFHMNRAESEMTRYIRRLSDRDLALDRSMIPLGSCTMKLNATAEMLPITWPEFS 527          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_RHOP5 (Glycine dehydrogenase [decarboxylating] OS=Rhodopseudomonas palustris (strain BisA53) GN=gcvP PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.548e-24
Identity = 71/172 (41.28%), Postives = 99/172 (57.56%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHA-IASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA+ +H      A GL+KLG    +   FFDT+ V   D  + I + A    +NLR+ D  T+  S DETTT + V+ ++  F G  S     A +   +  A+   L R SP++T  VF+ Y +E ELLRY+  L  ++L+L  +MIPLGSCTMKLNAT  MMP++ P FA
Sbjct:  360 IARSIHRKTAVLAAGLRKLGFT-TRNEAFFDTITVDVGDKQSEIIARARDENINLRIGDG-TLGLSLDETTTPKIVEAVWRAFGGALSY----AEIEPAMRDALHPTLKRTSPFMTQEVFHLYRSETELLRYMRKLSDRDLALDRAMIPLGSCTMKLNATTEMMPLSLPGFA 525          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_NITWN (Glycine dehydrogenase [decarboxylating] OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=gcvP PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.548e-24
Identity = 67/172 (38.95%), Postives = 97/172 (56.40%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHA-IASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA+ VH    T A GL +LG   +    F DT+ V   +  + I   A    +NLR+    T+  + DE T  E V+ L+  F       ++ A +       +P+ L R++ YLTHPVF+++ +E ELLRY+  L  ++L+L  +MIPLGSCTMKLNAT  M+P+TW  FA
Sbjct:  356 IARTVHRHTATLAAGLTRLGFAPLNSTAF-DTLTVNAGERQSEIVKRASSQGINLRINADGTLGIALDELTIEETVEALWRAFGA----TWSYADVEAHAPDLLPADLKRKTAYLTHPVFHEHRSETELLRYMRKLSDRDLALDRAMIPLGSCTMKLNATTEMIPLTWAAFA 522          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_BACFN (Glycine dehydrogenase [decarboxylating] OS=Bacteroides fragilis (strain ATCC 25285 / NCTC 9343) GN=gcvP PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.548e-24
Identity = 71/173 (41.04%), Postives = 94/173 (54.34%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXF 513
            IA R+H +       + KLG  +V    +FDT++    D   A  I + A   E+NLR  D+  V  S DETT +   + L  +FA      F       E  T I   L R++PYLTH VF+KYHTE E++RYI  L  K++SL  SMI LGSCTMKLNA   M+P++   F
Sbjct:  356 IASRIHSITVFLEKSIGKLGFKQVNK-QYFDTLRFILPDSVSAQQIRTIALSKEVNLRYFDNGDVGLSIDETTDVAAANILLSIFAIAAGKDFQKVDDIPEA-TIISEELKRQTPYLTHEVFSKYHTETEMMRYIKRLDRKDISLAQSMISLGSCTMKLNAAAEMLPLSCAEF 526          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_SINMW (Glycine dehydrogenase [decarboxylating] OS=Sinorhizobium medicae (strain WSM419) GN=gcvP PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.022e-24
Identity = 71/173 (41.04%), Postives = 97/173 (56.07%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLG-TVEVQGLPFFDTVKVKCADAHAIA-SAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IAQ VH      ALGL+KLG TVE     FFDT+ V+      I   AA   ++NLR + +  +  S DE +    ++ ++  F G  SV         E +  +P  L R S YLTHP+F+    E E+ RY+  L  ++L+L  +MIPLGSCTMKLNAT  M+P+TWP F+
Sbjct:  363 IAQSVHQKTVRLALGLEKLGYTVEPD--VFFDTITVEVGKLQGIILKAAVAEDVNLRKIGTTKIGISLDERSRPITLEAVWRAFGGDFSVD------QFEPDYRLPKELLRTSDYLTHPIFHMNRAESEMTRYMRRLADRDLALDRAMIPLGSCTMKLNATAEMLPITWPEFS 527          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_BACTN (Glycine dehydrogenase [decarboxylating] OS=Bacteroides thetaiotaomicron GN=gcvP PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.022e-24
Identity = 68/174 (39.08%), Postives = 96/174 (55.17%), Query Frame = 1
Query:    1 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD---AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXF 513
            TIA R+H +       LKK G  +V    +FDT++ +  +   A  I + A   E+NLR  ++  V  S DETT +   + L  +FA      +       E ++ I   L R +P+LTH VF+ YHTE E++RYI  L  K++SL  SMI LGSCTMKLNA   M+P++ P F
Sbjct:  355 TIASRIHSITVFLDKQLKKFGYTQVNA-QYFDTLRFELPEHVSAQQIRTIALSKEVNLRYYENGDVGFSIDETTDIAATNVLLSIFAIAAGKDYQKVEDVPE-KSNIDKALKRTTPFLTHEVFSNYHTETEMMRYIKRLDRKDISLAQSMISLGSCTMKLNAAAEMLPLSRPEF 526          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_AGRVS (Glycine dehydrogenase [decarboxylating] OS=Agrobacterium vitis (strain S4 / ATCC BAA-846) GN=gcvP PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.022e-24
Identity = 71/174 (40.80%), Postives = 99/174 (56.90%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLG-TVEVQGLPFFDTVKVKCADAHA-IASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSV-PFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IAQ+VH      A GL+KLG T+E +   FFDT+ ++       I  AA    +NLR V +  +  S DE T    ++ ++  F G  +V  FT        +  +P+ L R S YLTHP+F+    E E+ RYI  L  ++L+L  +MIPLGSCTMKLNAT  M+P+TWP F+
Sbjct:  363 IAQQVHQKTVLLAKGLEKLGFTIEPE--TFFDTITLEVGHMQGLILRAAVAEGVNLRKVGTTKIGISLDERTRPATLEAVWRAFGGNFAVGDFTP-------DYRLPTSLLRTSQYLTHPIFHMNRAESEMTRYIRRLSDRDLALDRAMIPLGSCTMKLNATAEMLPITWPEFS 527          
The following BLAST results are available for this feature:
BLAST of EY753823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 252
Match NameE-valueIdentityDescription
GCSP_PSYA26.950e-2539.77Glycine dehydrogenase [decarboxylating] OS=Psychro... [more]
GCSP_STRCO9.077e-2542.11Glycine dehydrogenase [decarboxylating] OS=Strepto... [more]
GCSP_BACFR9.077e-2541.04Glycine dehydrogenase [decarboxylating] OS=Bactero... [more]
GCSP_AGRT51.185e-2439.88Glycine dehydrogenase [decarboxylating] OS=Agrobac... [more]
GCSP_RHOP51.548e-2441.28Glycine dehydrogenase [decarboxylating] OS=Rhodops... [more]
GCSP_NITWN1.548e-2438.95Glycine dehydrogenase [decarboxylating] OS=Nitroba... [more]
GCSP_BACFN1.548e-2441.04Glycine dehydrogenase [decarboxylating] OS=Bactero... [more]
GCSP_SINMW2.022e-2441.04Glycine dehydrogenase [decarboxylating] OS=Sinorhi... [more]
GCSP_BACTN2.022e-2439.08Glycine dehydrogenase [decarboxylating] OS=Bactero... [more]
GCSP_AGRVS2.022e-2440.80Glycine dehydrogenase [decarboxylating] OS=Agrobac... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-007-C11-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753823 ID=EY753823; Name=EY753823; organism=Citrus sinensis; type=EST; length=759bp
ACCATTGCTCAAAGAGTCCATGGACTAGCCGGGACTTTCGCCCTTGGGTT
AAAAAAGCTGGGGACAGTGGAAGTCCAGGGGCTTCCCTTCTTTGACACTG
TGAAGGTGAAGTGTGCGGATGCACATGCCATTGCCAGTGCTGCTTACAAG
ATTGAAATGAATCTTCGGGTTGTAGATTCCAACACCGTCACTGCTTCCTT
TGATGAAACAACCACCTTGGAGGATGTTGATAAGCTTTTCATAGTTTTCG
CTGGGGGCAAATCAGTTCCATTCACTGCTGCATCTCTGGCTGAAGAGGTT
GAGACTGCAATTCCGTCTGGATTAACAAGGGAGAGTCCGTATCTGACACA
TCCTGTTTTTAACAAATACCACACAGAGCATGAATTGCTTAGATACATTC
ATCTGTTACAATCAAAGGAGCTCTCACTATGCCATAGTATGATTCCATTG
GGATCTTGTACAATGAAATTGAATGCAACAAACTGAATGATGCCAGTGAC
ATGGCCTANCTTTGCTACATACACCCTTTTGCCCCTGCTGACCAGGCTCA
GGNTTATCANGAAATGTTTACAATCTGGGTGAGTGGCTGTGTACCATTAC
TGGGGCTTGACTCTTCTCTTGCACCAAATGCNTGTGCANCTGGTGAGTAT
GCTGGGCTCATGGNTATCCGCGCTTATCATAAGGCAAGAGAGACATCACG
GNATGTGGCATTATACCGTGTCAGCCATGGAACATNCTGCTCTGCTGCCA
TGTTGGATG
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