EY753823

Overview
NameEY753823
Unique NameEY753823
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length759
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_BRUME (Glycine dehydrogenase [decarboxylating] OS=Brucella melitensis GN=gcvP PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.449e-24
Identity = 73/168 (43.45%), Postives = 98/168 (58.33%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKC-ADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTW 504
            IA RV  LA  FA  LK  G VE+ G   FDTV  K    A AIA+ A K    +R++D++TV  +FDET+T ED+  L  +F G K V           +T +  G  R   +LT  VF+ + +E E++R++  L  K+L+L  +MIPLGSCTMKLNA   MMPV+W
Sbjct:  348 IATRVAALAARFAAALKAAG-VEIAGESLFDTVTAKVPGKAAAIAAEADKGGRLIRIIDADTVGVTFDETSTEEDLTALASLF-GAKLVGG---------DTVLVPGKERGEGFLTQEVFHSHRSETEMMRFLRRLADKDLALDRAMIPLGSCTMKLNAAAEMMPVSW 504          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_RHOS5 (Glycine dehydrogenase [decarboxylating] OS=Rhodobacter sphaeroides (strain ATCC 17025 / ATH 2.4.3) GN=gcvP PE=3 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.505e-24
Identity = 71/173 (41.04%), Postives = 93/173 (53.76%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHA-IASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFAT 519
            IA+RVH      A  LK+ G   V    FFDT+ V+     A I +AA    +NLR V  + V  S DETT    + ++   F      P +       V    P  + RES YL+HPVF+    E E++RY+  L  ++L+L  +MIPLGSCTMKLNA   MMP+TWP FAT
Sbjct:  357 IAERVHLNTVRLAQALKEAGA-RVSPEAFFDTITVEVGVGQAGILAAARHRGINLRKVGRDRVGISLDETTDAGVIARVLDAFGIHDPAPAS-------VGLGFPEAMLRESAYLSHPVFDMNRAESEMMRYMRRLSDRDLALDRAMIPLGSCTMKLNAAAEMMPITWPEFAT 521          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_MYCGI (Glycine dehydrogenase [decarboxylating] OS=Mycobacterium gilvum (strain PYR-GCK) GN=gcvP PE=3 SV=1)

HSP 1 Score: 110.153 bits (274), Expect = 1.311e-23
Identity = 71/171 (41.52%), Postives = 92/171 (53.80%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXF 513
            IAQRVHG A   A GL   G VEV    FFDTV       A  + +AA +  +N+  VD++ V+ + DE TT E V  +   F    S            + A P+  TR S +LTHP F+ Y TE  ++RY+  L  K+++L  SMIPLGSCTMKLNA   M  +TW  F
Sbjct:  366 IAQRVHGHARALAAGLADAG-VEVVHDSFFDTVLAHVPGRADEVRAAAKERGINVWAVDADHVSVACDEATTAEHVADVLAAFGAAPS----------GADFAGPAVATRTSEFLTHPAFSDYRTETSMMRYLRSLADKDIALDRSMIPLGSCTMKLNAAAEMEAITWAEF 525          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_RHOSK (Glycine dehydrogenase [decarboxylating] OS=Rhodobacter sphaeroides (strain KD131 / KCTC 12085) GN=gcvP PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.712e-23
Identity = 70/173 (40.46%), Postives = 92/173 (53.18%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHA-IASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFAT 519
            IA+RVH      A  LK+ G   V    FFDT+ V+     A I +AA    +NLR V  + V  S DETT    + ++   F   +  P        +V    P  L RE+ YL+HPVF     E E++RY+  L  ++L+L  +MIPLGSCTMKLNA   MMP+TWP F T
Sbjct:  357 IAERVHLNTVRLATALKEAGA-RVSPEAFFDTITVEVGVGQAGILAAARHRGINLRKVGRDRVGISLDETTDAGVIARVLDAFGIHEPAP-------AKVGLGFPEPLLRETGYLSHPVFQMNRAESEMMRYMRRLSDRDLALDRAMIPLGSCTMKLNAAAEMMPITWPEFGT 521          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_RHOS4 (Glycine dehydrogenase [decarboxylating] OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=gcvP PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.712e-23
Identity = 70/173 (40.46%), Postives = 92/173 (53.18%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHA-IASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFAT 519
            IA+RVH      A  LK+ G   V    FFDT+ V+     A I +AA    +NLR V  + V  S DETT    + ++   F   +  P        +V    P  L RE+ YL+HPVF     E E++RY+  L  ++L+L  +MIPLGSCTMKLNA   MMP+TWP F T
Sbjct:  357 IAERVHLNTVRLATALKEAGA-RVSPEAFFDTITVEVGVGQAGILAAARHRGINLRKVGRDRVGISLDETTDAGVIARVLDAFGIHEPAP-------AKVGLGFPEPLLRETGYLSHPVFQMNRAESEMMRYMRRLSDRDLALDRAMIPLGSCTMKLNAAAEMMPITWPEFGT 521          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_RHOS1 (Glycine dehydrogenase [decarboxylating] OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=gcvP PE=3 SV=1)

HSP 1 Score: 109.768 bits (273), Expect = 1.712e-23
Identity = 70/173 (40.46%), Postives = 92/173 (53.18%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHA-IASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFAT 519
            IA+RVH      A  LK+ G   V    FFDT+ V+     A I +AA    +NLR V  + V  S DETT    + ++   F   +  P        +V    P  L RE+ YL+HPVF     E E++RY+  L  ++L+L  +MIPLGSCTMKLNA   MMP+TWP F T
Sbjct:  357 IAERVHLNTVRLATALKEAGA-RVSPEAFFDTITVEVGVGQAGILAAARHRGINLRKVGRDRVGISLDETTDAGVIARVLDAFGIHEPAP-------AKVGLGFPEPLLRETGYLSHPVFQMNRAESEMMRYMRRLSDRDLALDRAMIPLGSCTMKLNAAAEMMPITWPEFGT 521          

HSP 2 Score: 67.3958 bits (163), Expect = 9.673e-11
Identity = 43/100 (43.00%), Postives = 58/100 (58.00%), Query Frame = 3
Query:  480 KLNDASDMAXLCY-----IHPFAPADQAQXYXEMFTIWVSGCVPLLGLDS-SLAPNACAXGEYAGLMXIRAYHKAR-ETSRXVALYRVS-HGTXCSAAML 755
            KLN A++M  + +     +HPFAPADQA  Y E           + G D+ S+ PN+ A GEYAGL+ I AYH+AR E  R + L  VS HGT  ++A +
Sbjct:  504 KLNAAAEMMPITWPEFGTLHPFAPADQAAGYHEAIGDLAQRLCRITGYDAMSMQPNSGAQGEYAGLLTILAYHRARGEAERTICLIPVSAHGTNPASAQM 603          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_NOCFA (Glycine dehydrogenase [decarboxylating] OS=Nocardia farcinica GN=gcvP PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.920e-23
Identity = 72/172 (41.86%), Postives = 93/172 (54.07%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKC-ADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA+RVHG A   A     LG   V    +FDTV  +    A A+ + A    + LR+VD + V  + DE TT   V+ +   F           + AE V+  I    TR S +LTHP F +Y TE  +LRY+  L  K+++L  SMIPLGSCTMKLNAT  M P+TWP FA
Sbjct:  355 IARRVHGHAARIA---GALGEALVHDT-YFDTVLARVPGHAEAVVAKAAACGITLRLVDPDHVAVACDEATTDAHVEAVLDAFG---------VAPAEPVDAGIA---TRTSEFLTHPAFTRYRTETAMLRYLRSLSDKDIALDRSMIPLGSCTMKLNATAEMEPITWPGFA 510          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_MYCA1 (Glycine dehydrogenase [decarboxylating] OS=Mycobacterium avium (strain 104) GN=gcvP PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.920e-23
Identity = 72/172 (41.86%), Postives = 94/172 (54.65%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA+RVHG A   A  L   GT  V    +FDTV  +    AH + +AA    +NL  VD + V+ + DE TT E V  +   F    + P     +A E+ T       R S +LTHP F +Y TE  ++RY+  L  K+++L  SMIPLGSCTMKLNA   M P+TWP FA
Sbjct:  360 IARRVHGHAEAIAAAL---GTAVVHDR-YFDTVLARVPGRAHEVIAAAKARGINLWRVDDDHVSVACDEATTDEHVAAVLEAFGVAPAEP-----VASEIAT-------RTSEFLTHPAFTQYRTETAMMRYLRTLADKDIALDRSMIPLGSCTMKLNAAAEMEPITWPEFA 515          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_DINSH (Glycine dehydrogenase [decarboxylating] OS=Dinoroseobacter shibae (strain DFL 12) GN=gcvP PE=3 SV=1)

HSP 1 Score: 108.997 bits (271), Expect = 2.920e-23
Identity = 65/172 (37.79%), Postives = 97/172 (56.40%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHA-IASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IAQ VH      A GL +LG  +V    +FDT+ VK       I +AA +  +NLR V ++ +  + DE T    ++ ++  F G + + +    +       +P  + RES Y+THP+F+    E E+ RY+  L  ++L+L  +MIPLGSCTMKLNAT  M+P+TWP FA
Sbjct:  358 IAQTVHRKTARMADGLTELG-FKVDPQDYFDTITVKVGSMQGVILAAALREGVNLRKVGTDRIGITLDELTLGRTIEAVWRAF-GAEGMVYDKTRMVYH----LPQEMLRESSYMTHPIFHMNRAEAEMTRYMRRLADRDLALDRAMIPLGSCTMKLNATVEMLPLTWPEFA 523          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_MYCLE (Glycine dehydrogenase [decarboxylating] OS=Mycobacterium leprae GN=gcvP PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 8.496e-23
Identity = 69/171 (40.35%), Postives = 92/171 (53.80%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHA-IASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXF 513
            IA+RVH  A   A GL   G VEV    FFDTV  +       I  AA +  +N+ +VD + V+ + DE TT E +  +   FA   + P  A+    ++ T       R S +LTHP F KY TE  ++RY+  L  K+++L  SMIPLGSCTMKLNA   M  +TW  F
Sbjct:  366 IARRVHAQARALAAGLSAAG-VEVVHQAFFDTVLARVPGRTVQIQGAAKERGINVWLVDGDHVSVACDEATTDEHITAVLAAFA---ATPARASFAGPDIAT-------RTSAFLTHPTFTKYRTETSMMRYLRALADKDIALDRSMIPLGSCTMKLNAAAEMESITWQEF 525          
The following BLAST results are available for this feature:
BLAST of EY753823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 252
Match NameE-valueIdentityDescription
GCSP_BRUME3.449e-2443.45Glycine dehydrogenase [decarboxylating] OS=Brucell... [more]
GCSP_RHOS54.505e-2441.04Glycine dehydrogenase [decarboxylating] OS=Rhodoba... [more]
GCSP_MYCGI1.311e-2341.52Glycine dehydrogenase [decarboxylating] OS=Mycobac... [more]
GCSP_RHOSK1.712e-2340.46Glycine dehydrogenase [decarboxylating] OS=Rhodoba... [more]
GCSP_RHOS41.712e-2340.46Glycine dehydrogenase [decarboxylating] OS=Rhodoba... [more]
GCSP_RHOS11.712e-2340.46Glycine dehydrogenase [decarboxylating] OS=Rhodoba... [more]
GCSP_NOCFA2.920e-2341.86Glycine dehydrogenase [decarboxylating] OS=Nocardi... [more]
GCSP_MYCA12.920e-2341.86Glycine dehydrogenase [decarboxylating] OS=Mycobac... [more]
GCSP_DINSH2.920e-2337.79Glycine dehydrogenase [decarboxylating] OS=Dinoros... [more]
GCSP_MYCLE8.496e-2340.35Glycine dehydrogenase [decarboxylating] OS=Mycobac... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-007-C11-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753823 ID=EY753823; Name=EY753823; organism=Citrus sinensis; type=EST; length=759bp
ACCATTGCTCAAAGAGTCCATGGACTAGCCGGGACTTTCGCCCTTGGGTT
AAAAAAGCTGGGGACAGTGGAAGTCCAGGGGCTTCCCTTCTTTGACACTG
TGAAGGTGAAGTGTGCGGATGCACATGCCATTGCCAGTGCTGCTTACAAG
ATTGAAATGAATCTTCGGGTTGTAGATTCCAACACCGTCACTGCTTCCTT
TGATGAAACAACCACCTTGGAGGATGTTGATAAGCTTTTCATAGTTTTCG
CTGGGGGCAAATCAGTTCCATTCACTGCTGCATCTCTGGCTGAAGAGGTT
GAGACTGCAATTCCGTCTGGATTAACAAGGGAGAGTCCGTATCTGACACA
TCCTGTTTTTAACAAATACCACACAGAGCATGAATTGCTTAGATACATTC
ATCTGTTACAATCAAAGGAGCTCTCACTATGCCATAGTATGATTCCATTG
GGATCTTGTACAATGAAATTGAATGCAACAAACTGAATGATGCCAGTGAC
ATGGCCTANCTTTGCTACATACACCCTTTTGCCCCTGCTGACCAGGCTCA
GGNTTATCANGAAATGTTTACAATCTGGGTGAGTGGCTGTGTACCATTAC
TGGGGCTTGACTCTTCTCTTGCACCAAATGCNTGTGCANCTGGTGAGTAT
GCTGGGCTCATGGNTATCCGCGCTTATCATAAGGCAAGAGAGACATCACG
GNATGTGGCATTATACCGTGTCAGCCATGGAACATNCTGCTCTGCTGCCA
TGTTGGATG
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