EY753823

Overview
NameEY753823
Unique NameEY753823
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length759
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_MYCLB (Glycine dehydrogenase [decarboxylating] OS=Mycobacterium leprae (strain Br4923) GN=gcvP PE=3 SV=1)

HSP 1 Score: 107.457 bits (267), Expect = 8.496e-23
Identity = 69/171 (40.35%), Postives = 92/171 (53.80%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHA-IASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXF 513
            IA+RVH  A   A GL   G VEV    FFDTV  +       I  AA +  +N+ +VD + V+ + DE TT E +  +   FA   + P  A+    ++ T       R S +LTHP F KY TE  ++RY+  L  K+++L  SMIPLGSCTMKLNA   M  +TW  F
Sbjct:  366 IARRVHAQARALAAGLSAAG-VEVVHQAFFDTVLARVPGRTVQIQGAAKERGINVWLVDGDHVSVACDEATTDEHITAVLAAFA---ATPARASFAGPDIAT-------RTSAFLTHPTFTKYRTETSMMRYLRALADKDIALDRSMIPLGSCTMKLNAAAEMESITWQEF 525          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_PROMM (Glycine dehydrogenase [decarboxylating] OS=Prochlorococcus marinus (strain MIT 9313) GN=gcvP PE=3 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.472e-22
Identity = 69/180 (38.33%), Postives = 98/180 (54.44%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTA-------SFDETTTLEDVDKLFIVFA--GGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA+RV  L      GL +LG   VQ +  FDT++V C +A A+  AA     NLRV+              SFDE +T +++  +  + A   G+ VP         +E  +   L R+ P+L   VF++Y +E ELLRY+  L  ++LSL H MIPLGSCTMKLNA   ++P++W  FA
Sbjct:  347 IARRVLRLRAQLERGLHQLG-YPVQSIARFDTIEVICREAPAVHQAAALAGFNLRVLPLGVAPEAAHGFGISFDELSTDQELKSILQILAEAAGQPVPVLEDPGNPHLEELVGLPL-RQRPWLQQQVFHRYRSETELLRYLQRLVGRDLSLVHGMIPLGSCTMKLNAAAELIPISWREFA 524          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_AKKM8 (Glycine dehydrogenase [decarboxylating] OS=Akkermansia muciniphila (strain ATCC BAA-835) GN=gcvP PE=3 SV=1)

HSP 1 Score: 105.145 bits (261), Expect = 4.216e-22
Identity = 63/172 (36.63%), Postives = 94/172 (54.65%), Query Frame = 1
Query:   46 GLKKLGT-----------------VEVQGLPFFDTVKVKC-ADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWP 507
            GLK++GT                 + ++   FFDT+ +     A A+   A +   N+R VD++    S DET T  D+  L    AG +    T+A+   +     P   TR++P+ T   FN YH+E E++RYI  L+S++L+L  +MIPLGSCTMKLNA + M+P+TWP
Sbjct:  350 GLKRIGTEIHLKTKSLYKALTEAGIAIENKNFFDTLLLSVPGQADAMVQKALEAGYNIRRVDADHAAISLDETATCADIAALASALAGAE----TSAACDCDAPAWDPVH-TRQTPFCTEKAFNSYHSETEMMRYIRRLESRDLALNEAMIPLGSCTMKLNAASEMIPITWP 516          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_PROM3 (Glycine dehydrogenase [decarboxylating] OS=Prochlorococcus marinus (strain MIT 9303) GN=gcvP PE=3 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 5.507e-22
Identity = 69/180 (38.33%), Postives = 98/180 (54.44%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTA-------SFDETTTLEDVDKLFIVFA--GGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA+RV  L      GL +LG   VQ +  FDT++V C +A A+  AA     NLRV+              SFDE +T +++  +  + A   G+ VP         +E  +   L R+ P+L   VF++Y +E ELLRY+  L  ++LSL H MIPLGSCTMKLNA   ++P++W  FA
Sbjct:  367 IARRVLLLRAQLERGLHQLG-YPVQSIARFDTIEVICREAPAVHQAAALAGFNLRVLPLGVAPEAAHGFGISFDELSTDQELKSILQILAEAAGQPVPVLEDLGNPHLEELVGLPL-RQRPWLQQQVFHRYRSETELLRYLQRLVGRDLSLVHGMIPLGSCTMKLNAAAELIPISWREFA 544          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_MYCPA (Glycine dehydrogenase [decarboxylating] OS=Mycobacterium paratuberculosis GN=gcvP PE=3 SV=1)

HSP 1 Score: 104.375 bits (259), Expect = 7.192e-22
Identity = 70/172 (40.70%), Postives = 93/172 (54.07%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA+RVHG A   A  L   GT  V    +FDTV  +    A  + +AA    +NL  VD + V+ + DE TT E V  +   F    + P     +A E+ T       R + +LTHP F +Y TE  ++RY+  L  K+++L  SMIPLGSCTMKLNA   M P+TWP FA
Sbjct:  360 IARRVHGHAEAIAAAL---GTAVVHDR-YFDTVLARVPGRADEVIAAAKARGINLWRVDDDHVSVACDEATTDEHVAAVLEAFGVAPAEP-----VASEIAT-------RTAEFLTHPAFTQYRTETAMMRYLRTLADKDIALDRSMIPLGSCTMKLNAAAEMEPITWPEFA 515          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_BARHE (Glycine dehydrogenase [decarboxylating] OS=Bartonella henselae GN=gcvP PE=3 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 9.393e-22
Identity = 67/174 (38.51%), Postives = 95/174 (54.60%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKC-ADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPS--GLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IAQRVH L   F  GL+ +G +  +G  FFD V +     A  IA  A      +RV+D + V  +FDE +T ED   L  +F  G             V+ A P   G  R++ +L+ P F+  H+E +++R++  L  K+L+L  +MIPLGSCTMKLNA   +MPV+WP  A
Sbjct:  347 IAQRVHHLTCRFVGGLEAVG-ISCEGEYFFDCVSIVVKGKAREIACQAKAGGRLIRVLDDDRVVINFDELSTQEDAHALAQLFGAGL------------VDQASPRLMGKGRDTTFLSQPFFHAVHSETDMMRFLRRLSDKDLALDRAMIPLGSCTMKLNAAAELMPVSWPTVA 507          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_SYNPX (Glycine dehydrogenase [decarboxylating] OS=Synechococcus sp. (strain WH8102) GN=gcvP PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.733e-21
Identity = 70/181 (38.67%), Postives = 100/181 (55.25%), Query Frame = 1
Query:    1 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVV-------DSNTVTASFDETTTLEDVDKLF--IVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            +IA+R+ G        L+ LG V   G   FDTV V  A A A+  A  +   NLRV+       +S     + DE TT +++ +L   +  A G++ P    +  EE+   +P    R  P+L+  VF+ + +E EL+RYI  L S++LSL H MIPLGSCTMKLNA   ++PV+WP FA
Sbjct:  352 SIARRIVGQRRQLERALQSLGFVVPDG-ERFDTVTVTSALAPAVHQAVGEAGFNLRVLPDGANPAESTGFGIALDECTTADELSRLVAALATAAGQTSPSLPLAPVEEL-CGVPE---RVDPWLSQSVFHDHLSETELMRYIQRLVSRDLSLVHGMIPLGSCTMKLNAAAELLPVSWPAFA 527          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_JANSC (Glycine dehydrogenase [decarboxylating] OS=Jannaschia sp. (strain CCS1) GN=gcvP PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 2.733e-21
Identity = 66/171 (38.60%), Postives = 93/171 (54.39%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHA-IASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXF 513
            IA+RVH  A   A  L   G        FFDT+ V   D  + I +AA    +NLR V ++ +  S DE TT   ++ +   F   K+    A +++++        L R S YLTHP+F+    E E++RY+  L  ++L+L  +MIPLGSCTMKLNA   MMP+TWP F
Sbjct:  357 IAERVHMRAVRLAASLSA-GGFAPDNDTFFDTLTVHVGDKQSRIMAAAVARGINLRDVGADRIGISVDEVTTDAHIEAVCRAFGVLKAPAPKAPAISDD--------LLRMSDYLTHPIFHMNRAESEMMRYMRRLSDRDLALDRAMIPLGSCTMKLNAAVEMMPITWPEF 518          

HSP 2 Score: 72.4034 bits (176), Expect = 3.007e-12
Identity = 43/99 (43.43%), Postives = 60/99 (60.61%), Query Frame = 3
Query:  480 KLNDASDMAXLCY-----IHPFAPADQAQXYXEMFTIWVSGCVPLLGLDS-SLAPNACAXGEYAGLMXIRAYHKARETSRXVALYRVS-HGTXCSAAML 755
            KLN A +M  + +     +HPFAPADQA+ Y EM     +    + G D+ S+ PN+ A GEYAGL+ I AYH+AR  +R + L  VS HGT  ++A +
Sbjct:  503 KLNAAVEMMPITWPEFGNLHPFAPADQAEGYAEMLEDLSAKLCDITGYDAMSMQPNSGAQGEYAGLLTIAAYHRARGETRNICLIPVSAHGTNPASAQM 601          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_BARQU (Glycine dehydrogenase [decarboxylating] OS=Bartonella quintana GN=gcvP PE=3 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 3.569e-21
Identity = 65/172 (37.79%), Postives = 95/172 (55.23%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKC-ADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IAQR+H L   F  GL+  G +  +G  FFD V V     A  IA  A      +R++D + V  +FDE +T ED   L  +F          A L ++V   +  G  R++ +L+ P F+  H+E +++R++  L  K+L+L  +MIPLGSCTMKLNA   +MPV+WP  A
Sbjct:  347 IAQRIHSLTCRFMGGLEAAG-IPCEGESFFDCVSVVVKGKAQEIARQAKAGGRLVRILDDDRVAVNFDELSTEEDACTLAQLFG---------AQLVDQVSPRL-WGKGRDAAFLSQPFFHVVHSETDMMRFLRRLSDKDLALDRAMIPLGSCTMKLNAAAELMPVSWPTVA 507          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_PROMA (Glycine dehydrogenase [decarboxylating] OS=Prochlorococcus marinus GN=gcvP PE=3 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.039e-20
Identity = 67/183 (36.61%), Postives = 96/183 (52.46%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVD-------SNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLA----EEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFAT 519
            IA+ +  L     L LK+ G        F DT+++ C +A  I   +     NLR++        S     SFDE +T +++ KL  +FA  K   F          +E  T++P    R +P+L   VFN Y TE EL+RYI  L S++ SL + MIPLGSCTMKLNAT  ++P+TW  F++
Sbjct:  357 IAKNIIYLRSQLELYLKEFGYTFAPDCRF-DTLEIHCLEAPEIHRLSILSGFNLRILPLGASIEKSKGFAVSFDELSTTKELYKLCKIFADVKDKNFEPRENTNFNFKESLTSLP---LRTTPWLKQQVFNNYRTETELMRYIQKLASRDFSLVNGMIPLGSCTMKLNATAELLPITWKEFSS 535          
The following BLAST results are available for this feature:
BLAST of EY753823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 252
Match NameE-valueIdentityDescription
GCSP_MYCLB8.496e-2340.35Glycine dehydrogenase [decarboxylating] OS=Mycobac... [more]
GCSP_PROMM2.472e-2238.33Glycine dehydrogenase [decarboxylating] OS=Prochlo... [more]
GCSP_AKKM84.216e-2236.63Glycine dehydrogenase [decarboxylating] OS=Akkerma... [more]
GCSP_PROM35.507e-2238.33Glycine dehydrogenase [decarboxylating] OS=Prochlo... [more]
GCSP_MYCPA7.192e-2240.70Glycine dehydrogenase [decarboxylating] OS=Mycobac... [more]
GCSP_BARHE9.393e-2238.51Glycine dehydrogenase [decarboxylating] OS=Bartone... [more]
GCSP_SYNPX2.733e-2138.67Glycine dehydrogenase [decarboxylating] OS=Synecho... [more]
GCSP_JANSC2.733e-2138.60Glycine dehydrogenase [decarboxylating] OS=Jannasc... [more]
GCSP_BARQU3.569e-2137.79Glycine dehydrogenase [decarboxylating] OS=Bartone... [more]
GCSP_PROMA1.039e-2036.61Glycine dehydrogenase [decarboxylating] OS=Prochlo... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS12-C1-001-007-C11-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753823 ID=EY753823; Name=EY753823; organism=Citrus sinensis; type=EST; length=759bp
ACCATTGCTCAAAGAGTCCATGGACTAGCCGGGACTTTCGCCCTTGGGTT
AAAAAAGCTGGGGACAGTGGAAGTCCAGGGGCTTCCCTTCTTTGACACTG
TGAAGGTGAAGTGTGCGGATGCACATGCCATTGCCAGTGCTGCTTACAAG
ATTGAAATGAATCTTCGGGTTGTAGATTCCAACACCGTCACTGCTTCCTT
TGATGAAACAACCACCTTGGAGGATGTTGATAAGCTTTTCATAGTTTTCG
CTGGGGGCAAATCAGTTCCATTCACTGCTGCATCTCTGGCTGAAGAGGTT
GAGACTGCAATTCCGTCTGGATTAACAAGGGAGAGTCCGTATCTGACACA
TCCTGTTTTTAACAAATACCACACAGAGCATGAATTGCTTAGATACATTC
ATCTGTTACAATCAAAGGAGCTCTCACTATGCCATAGTATGATTCCATTG
GGATCTTGTACAATGAAATTGAATGCAACAAACTGAATGATGCCAGTGAC
ATGGCCTANCTTTGCTACATACACCCTTTTGCCCCTGCTGACCAGGCTCA
GGNTTATCANGAAATGTTTACAATCTGGGTGAGTGGCTGTGTACCATTAC
TGGGGCTTGACTCTTCTCTTGCACCAAATGCNTGTGCANCTGGTGAGTAT
GCTGGGCTCATGGNTATCCGCGCTTATCATAAGGCAAGAGAGACATCACG
GNATGTGGCATTATACCGTGTCAGCCATGGAACATNCTGCTCTGCTGCCA
TGTTGGATG
back to top