EY753823
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_ROSDO (Glycine dehydrogenase [decarboxylating] OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=gcvP PE=3 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.154e-20 Identity = 64/173 (36.99%), Postives = 92/173 (53.18%), Query Frame = 1 Query: 4 IAQRVHGLAGTFALGLKKLG-TVEVQGLPFFDTVKVKCADAHA-IASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516 IAQR+H A A GL++ G TV+ Q FFDT+ V A + +A +NLR V V S +E + ++ ++ F T A + P + R S YLTHP+F+ E E++RY+ L ++L+L +MIPLGSCTMKLN+ MMPV+W F+ Sbjct: 358 IAQRIHRKAVRLAKGLEEAGFTVDPQA--FFDTITVDVGPLQAAVMKSAVDEGINLRRVGETRVGISLNERCRPDTLEAVWRAFG------ITRADNDFRPDYRFPEEMLRTSDYLTHPIFHMNRAETEMMRYMRRLSDRDLALDRAMIPLGSCTMKLNSAAEMMPVSWRDFS 522
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_PROAC (Glycine dehydrogenase [decarboxylating] OS=Propionibacterium acnes GN=gcvP PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.500e-19 Identity = 60/172 (34.88%), Postives = 91/172 (52.91%), Query Frame = 1 Query: 4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKC-ADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516 IA++V A A L+ G ++V FFDT++++ A + + A + L +VD + + S DET T +++ +L + G + + A P L R S ++THPVF+ YHTE ++RY+ L + L MIPLGSCTMKLNA M +TWP F+ Sbjct: 375 IARQVTDRAHQLASALRAAG-LDVADQQFFDTIRIRTKGGAKELWNRAREGGYTLDLVDGDILQISVDETVTDDELRELTQLLGGSTD------EIRGPADRAWPEDLRRTSSFMTHPVFSSYHTETTMMRYLKRLADHDYGLDRGMIPLGSCTMKLNAAAEMEAMTWPAFS 539
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_SYNR3 (Glycine dehydrogenase [decarboxylating] OS=Synechococcus sp. (strain RCC307) GN=gcvP PE=3 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 2.828e-18 Identity = 64/173 (36.99%), Postives = 87/173 (50.29%), Query Frame = 1 Query: 4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGG--KSVPFTAASLAEEVETAIPSGL-TRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXF 513 IA+RV L A GL++LG ++V P FDT++++ + NL + S DE + +V L FA G ++ P + LA + L R + +L VF Y +E ELLRYI L SK+ SL H MIPLGSCTMKLNA + PV+W F Sbjct: 354 IARRVQRLTAALAAGLQQLG-LDVAAAPAFDTLRLRLDQPNGWIERLEAAGFNLLPLPDGA-GISLDECSDEAEVQALLECFAAGCGRTAPAISELLAATPQAKSVGELPVRPAGWLPQAVFQLYRSETELLRYIQRLVSKDFSLVHGMIPLGSCTMKLNAAAELQPVSWAAF 524
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_MYCBT (Glycine dehydrogenase [decarboxylating] OS=Mycobacterium bovis (strain BCG / Tokyo 172 / ATCC 35737 / TMC 1019) GN=gcvP PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.229e-18 Identity = 65/171 (38.01%), Postives = 87/171 (50.88%), Query Frame = 1 Query: 4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXF 513 IA+RVH A A LG V +FDTV + A + + A +NL VD++ V+ + DE TT V + F + P A +A TR S +LTHP F +Y TE ++RY+ L K+++L SMIPLGSCTMKLNA M +TWP F Sbjct: 360 IARRVHAHAEAIA---GALGDALVHD-KYFDTVLARVPGRADEVLARAKANGINLWRVDADHVSVACDEATTDTHVAVVLDAFGVAAAAP-AHADIA-----------TRTSEFLTHPAFTQYRTETSMMRYLRALADKDIALDRSMIPLGSCTMKLNAAAEMESITWPEF 514
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_MYCBP (Glycine dehydrogenase [decarboxylating] OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) GN=gcvP PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.229e-18 Identity = 65/171 (38.01%), Postives = 87/171 (50.88%), Query Frame = 1 Query: 4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXF 513 IA+RVH A A LG V +FDTV + A + + A +NL VD++ V+ + DE TT V + F + P A +A TR S +LTHP F +Y TE ++RY+ L K+++L SMIPLGSCTMKLNA M +TWP F Sbjct: 360 IARRVHAHAEAIA---GALGDALVHD-KYFDTVLARVPGRADEVLARAKANGINLWRVDADHVSVACDEATTDTHVAVVLDAFGVAAAAP-AHADIA-----------TRTSEFLTHPAFTQYRTETSMMRYLRALADKDIALDRSMIPLGSCTMKLNAAAEMESITWPEF 514
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_MYCBO (Glycine dehydrogenase [decarboxylating] OS=Mycobacterium bovis GN=gcvP PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 8.229e-18 Identity = 65/171 (38.01%), Postives = 87/171 (50.88%), Query Frame = 1 Query: 4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXF 513 IA+RVH A A LG V +FDTV + A + + A +NL VD++ V+ + DE TT V + F + P A +A TR S +LTHP F +Y TE ++RY+ L K+++L SMIPLGSCTMKLNA M +TWP F Sbjct: 360 IARRVHAHAEAIA---GALGDALVHD-KYFDTVLARVPGRADEVLARAKANGINLWRVDADHVSVACDEATTDTHVAVVLDAFGVAAAAP-AHADIA-----------TRTSEFLTHPAFTQYRTETSMMRYLRALADKDIALDRSMIPLGSCTMKLNAAAEMESITWPEF 514
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_MYCTU (Probable glycine dehydrogenase [decarboxylating] OS=Mycobacterium tuberculosis GN=gcvP PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.075e-17 Identity = 65/171 (38.01%), Postives = 87/171 (50.88%), Query Frame = 1 Query: 4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXF 513 IA+RVH A A LG V +FDTV + A + + A +NL VD++ V+ + DE TT V + F AA+ + A TR S +LTHP F +Y TE ++RY+ L K+++L SMIPLGSCTMKLNA M +TWP F Sbjct: 360 IARRVHAHAEAIA---GALGDALVHD-KYFDTVLARVPGRADEVLARAKANGINLWRVDADHVSVACDEATTDTHVAVVLDAFG-------VAAAAPAHTDIA-----TRTSEFLTHPAFTQYRTETSMMRYLRALADKDIALDRSMIPLGSCTMKLNAAAEMESITWPEF 514
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_MYCTA (Glycine dehydrogenase [decarboxylating] OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) GN=gcvP PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.075e-17 Identity = 65/171 (38.01%), Postives = 87/171 (50.88%), Query Frame = 1 Query: 4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXF 513 IA+RVH A A LG V +FDTV + A + + A +NL VD++ V+ + DE TT V + F AA+ + A TR S +LTHP F +Y TE ++RY+ L K+++L SMIPLGSCTMKLNA M +TWP F Sbjct: 360 IARRVHAHAEAIA---GALGDALVHD-KYFDTVLARVPGRADEVLARAKANGINLWRVDADHVSVACDEATTDTHVAVVLDAFG-------VAAAAPAHTDIA-----TRTSEFLTHPAFTQYRTETSMMRYLRALADKDIALDRSMIPLGSCTMKLNAAAEMESITWPEF 514
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_PROMT (Glycine dehydrogenase [decarboxylating] OS=Prochlorococcus marinus (strain NATL2A) GN=gcvP PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.404e-17 Identity = 60/158 (37.97%), Postives = 84/158 (53.16%), Query Frame = 1 Query: 91 FDTVKVKCADAHAIASAAYKIEMNLRVV-------DSNTVTASFDETTTLEDVDKLFIVFAGGKSVP--------FTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFAT 519 FD+V V C++A + A + NLRV+ ++ +FDE T E++ KL + A K F ASL + IP RE +L VFN+Y +E +L+RYIH L SK+ SL MIPLGSCTMKLNA ++P+ W F++ Sbjct: 387 FDSVDVYCSEASEVIQLASEEGYNLRVLPIGSDFENAKGFGVTFDELTCDEEIYKLHQILAQVKGKKTHDLSNFIFENASLID-----IP---LREKSWLEQSVFNQYQSETDLMRYIHCLVSKDFSLVQGMIPLGSCTMKLNAAAELLPIEWREFSS 536
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_PROM1 (Glycine dehydrogenase [decarboxylating] OS=Prochlorococcus marinus (strain NATL1A) GN=gcvP PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.647e-16 Identity = 52/150 (34.67%), Postives = 78/150 (52.00%), Query Frame = 1 Query: 91 FDTVKVKCADAHAIASAAYKIEMNLRVV-------DSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFAT 519 FD+V V C++A + A + N RV+ ++ +FDE T E++ L + A K S ++ RE +L VFN+Y +E +L+RYIH L SK+ SL MIPLGSCTMKLN+ ++P+ W F++ Sbjct: 387 FDSVDVYCSEASEVIQLASEEGYNFRVLPIGSDFENAKGFGVTFDELTCDEEIYTLHQILAQVKGKKAHDLSNFLNENASLVDIPLREKSWLEQSVFNQYQSETDLMRYIHSLVSKDFSLVQGMIPLGSCTMKLNSAAELLPIEWREFSS 536 The following BLAST results are available for this feature:
BLAST of EY753823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 252
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY753823 ID=EY753823; Name=EY753823; organism=Citrus sinensis; type=EST; length=759bpback to top |