EY753823

Overview
NameEY753823
Unique NameEY753823
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length759
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_TROW8 (Glycine dehydrogenase [decarboxylating] OS=Tropheryma whipplei (strain TW08/27) GN=gcvP PE=3 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 7.702e-16
Identity = 67/200 (33.50%), Postives = 87/200 (43.50%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVD------KLFIV------------------FAGGKSVPFTAASLAEEVETAIPSGLTRE-----SPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA R++ +A  FA  LK+     V  L  FDT+++          A  K ++    VD N +  +FDE T   D D      K+F +                  F G         S       ++ S L R      S YL HPVFN Y  E  L+RY+  L  K+ +L   MIPLGSCTMKLNA   + PV WP FA
Sbjct:  344 IAHRINTVAVGFARLLKQTA-FRVSSLDIFDTIEIN-NPTQVCVEAESKYDLLFWKVDDNKLRITFDEVTARLDGDLPERLSKVFGISPDKIRDLGCNYDSCDCSFYGDLQQAREGLSSVASRNISVHSDLARHPLRRFSGYLKHPVFNNYTGEVALMRYLKALSDKDFALDRGMIPLGSCTMKLNAAFQLEPVLWPEFA 541          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_TROWT (Glycine dehydrogenase [decarboxylating] OS=Tropheryma whipplei (strain Twist) GN=gcvP PE=3 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.992e-15
Identity = 66/201 (32.84%), Postives = 91/201 (45.27%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVD------KLFIV-------------------FAGGKSVPFTAASLAEEVETAIPSGLTRE-----SPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA R++ +A  FA  LK+     V  L  FDT+++          A  K ++    VD N +  +FDE T   D D      K+F +                   ++  +      +S+A     ++ S L R      S YL HPVFN Y  E  L+RY+  L  K+ +L   MIPLGSCTMKLNA   + PV WP FA
Sbjct:  344 IAHRINTVAVGFARLLKQTA-FRVSSLDIFDTIEIN-NPTQLCVEAESKHDLLFWKVDDNKLRITFDEVTARLDGDLPERLSKVFGISPDKIRDLGCNYDSCDCSFYSDSQQAREGLSSVASR-NISVHSDLARHPLRRFSGYLKHPVFNNYTGEVALMRYLKALSDKDFALDRGMIPLGSCTMKLNAAFQLEPVLWPEFA 541          
The following BLAST results are available for this feature:
BLAST of EY753823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 252
Match NameE-valueIdentityDescription
GCSP_TROW87.702e-1633.50Glycine dehydrogenase [decarboxylating] OS=Tropher... [more]
GCSP_TROWT4.992e-1532.84Glycine dehydrogenase [decarboxylating] OS=Tropher... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-007-C11-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753823 ID=EY753823; Name=EY753823; organism=Citrus sinensis; type=EST; length=759bp
ACCATTGCTCAAAGAGTCCATGGACTAGCCGGGACTTTCGCCCTTGGGTT
AAAAAAGCTGGGGACAGTGGAAGTCCAGGGGCTTCCCTTCTTTGACACTG
TGAAGGTGAAGTGTGCGGATGCACATGCCATTGCCAGTGCTGCTTACAAG
ATTGAAATGAATCTTCGGGTTGTAGATTCCAACACCGTCACTGCTTCCTT
TGATGAAACAACCACCTTGGAGGATGTTGATAAGCTTTTCATAGTTTTCG
CTGGGGGCAAATCAGTTCCATTCACTGCTGCATCTCTGGCTGAAGAGGTT
GAGACTGCAATTCCGTCTGGATTAACAAGGGAGAGTCCGTATCTGACACA
TCCTGTTTTTAACAAATACCACACAGAGCATGAATTGCTTAGATACATTC
ATCTGTTACAATCAAAGGAGCTCTCACTATGCCATAGTATGATTCCATTG
GGATCTTGTACAATGAAATTGAATGCAACAAACTGAATGATGCCAGTGAC
ATGGCCTANCTTTGCTACATACACCCTTTTGCCCCTGCTGACCAGGCTCA
GGNTTATCANGAAATGTTTACAATCTGGGTGAGTGGCTGTGTACCATTAC
TGGGGCTTGACTCTTCTCTTGCACCAAATGCNTGTGCANCTGGTGAGTAT
GCTGGGCTCATGGNTATCCGCGCTTATCATAAGGCAAGAGAGACATCACG
GNATGTGGCATTATACCGTGTCAGCCATGGAACATNCTGCTCTGCTGCCA
TGTTGGATG
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