EY753823

Overview
NameEY753823
Unique NameEY753823
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length759
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12632 contig Csv1_Contig12632:365..1127. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_VIBCM (Glycine dehydrogenase [decarboxylating] OS=Vibrio cholerae serotype O1 (strain M66-2) GN=gcvP PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 8.191e-34
Identity = 81/172 (47.09%), Postives = 107/172 (62.21%), Query Frame = 1
Query:    1 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKC-ADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXF 513
            TIA+R H L    A GL K G  E+    FFDT+ +   A   A+  AA +  +NLR +  N +  SFDETTT+ DV+ LF +F   + V   +  +A     AIP    R+S +LTHPVFN +H+E ++LRY+  L++K+ SL H MIPLGSCTMKLNAT  M+PVTWP F
Sbjct:  357 TIARRAHHLTAILAAGLTKAG-YELAHQHFFDTLAINTGAKTDALYQAAQQANINLRKLP-NQLGVSFDETTTVADVEALFAIFGIKEEVHALSDRIATNELAAIPESCRRQSAFLTHPVFNTHHSETQMLRYMKHLENKDFSLTHGMIPLGSCTMKLNATAEMIPVTWPEF 526          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_VIBC3 (Glycine dehydrogenase [decarboxylating] OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=gcvP PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 8.191e-34
Identity = 81/172 (47.09%), Postives = 107/172 (62.21%), Query Frame = 1
Query:    1 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKC-ADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXF 513
            TIA+R H L    A GL K G  E+    FFDT+ +   A   A+  AA +  +NLR +  N +  SFDETTT+ DV+ LF +F   + V   +  +A     AIP    R+S +LTHPVFN +H+E ++LRY+  L++K+ SL H MIPLGSCTMKLNAT  M+PVTWP F
Sbjct:  357 TIARRAHHLTAILAAGLTKAG-YELAHQHFFDTLAINTGAKTDALYQAAQQANINLRKLP-NQLGVSFDETTTVADVEALFAIFGIKEEVHALSDRIATNELAAIPESCRRQSAFLTHPVFNTHHSETQMLRYMKHLENKDFSLTHGMIPLGSCTMKLNATAEMIPVTWPEF 526          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_SHELP (Glycine dehydrogenase [decarboxylating] OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=gcvP PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.397e-33
Identity = 81/173 (46.82%), Postives = 105/173 (60.69%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG---GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXF 513
            IA R+H LA  FA GLK  G VE+    +FDTV  K AD+ A  + A   E+NLR+     +  +  ETTT EDV +LF +  G   G  V    A +      +IP+ L R+   L HP FN+YH+E E++RYI  L++K+L+L HSMI LGSCTMKLNA   MMPV+WP F
Sbjct:  360 IADRIHRLADIFAAGLKAKG-VELVNNTWFDTVSFKVADSAAAQARAIAGEVNLRIDSDGILGVAMAETTTREDVAQLFDIVLGEGHGLDVAAIDADIIANGSNSIPAELVRQDAILEHPTFNRYHSETEMMRYIKRLENKDLALNHSMISLGSCTMKLNAATEMMPVSWPEF 531          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_NOSP7 (Glycine dehydrogenase [decarboxylating] OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=gcvP PE=3 SV=1)

HSP 1 Score: 143.28 bits (360), Expect = 1.397e-33
Identity = 83/177 (46.89%), Postives = 106/177 (59.89%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCA--DAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGL-----TRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXF 513
            IA+ +H L    A GLK LG  ++    FFDT++V+        I  A     +NLR+ D   V  S DETTT +D+ +LF +FA   S+ F    + + +     S L      R S YLTHPVFN+YH+E ELLRY+H L+SK+LSL  SMIPLGSCTMKLNAT  M+PVTW  F
Sbjct:  371 IAENIHQLTLMLAAGLKHLG-YKISSEHFFDTLRVELGTRSLEVILEACQARNINLRIFDDTAVGISVDETTTADDLIELFEIFAAPDSLLFGFKEIGDLIAARRKSSLQNSTFARTSNYLTHPVFNRYHSETELLRYLHKLESKDLSLTTSMIPLGSCTMKLNATAEMIPVTWEEF 546          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_CHRVO (Glycine dehydrogenase [decarboxylating] OS=Chromobacterium violaceum GN=gcvP PE=3 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.383e-33
Identity = 82/171 (47.95%), Postives = 106/171 (61.99%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA R+H LA  FA  +K+ G   V    FFDTV+V    A AI +AA     NLR V    +  +F E  T  D+ KL  +F G    P   A+L      AIP+ L RES  LTHPVFN +H+EHE+LRY+  L++++L++ HSMI LGSCTMKLNAT+ M+P+TWP FA
Sbjct:  356 IAARIHRLAAIFAHAVKEAGGKLVFDR-FFDTVQVDAPKADAIYAAALAAGYNLRRVGKTVLGVAFHEAATESDLAKLIELFTGK---PADIAALDAAALDAIPAALKRESAILTHPVFNTHHSEHEMLRYMKKLENRDLAMNHSMISLGSCTMKLNATSEMIPITWPEFA 522          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_ERWCT (Glycine dehydrogenase [decarboxylating] OS=Erwinia carotovora subsp. atroseptica GN=gcvP PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.065e-33
Identity = 80/174 (45.98%), Postives = 109/174 (62.64%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG---GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA R+H L    A GL + G + ++   +FDT+ ++ AD   + S A    +NLR   ++ V  + DE TT EDV  LF V  G   G  +    AS+A+EV T IP+GL R    L+HPVFN+YH+E E++RY+H L  K+L+L  +MIPLGSCTMKLNA   M+P+TWP FA
Sbjct:  360 IAGRIHRLTDILAAGLTQGGLL-LRHRSWFDTLTIEVADKDVVLSRALSFGINLRSDLASAVGITLDEATTREDVLALFAVLLGDDHGLDIEALDASIAQEVAT-IPAGLLRHDAILSHPVFNRYHSETEMMRYLHRLARKDLALNQAMIPLGSCTMKLNAAAEMLPITWPEFA 531          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_BURVG (Glycine dehydrogenase [decarboxylating] OS=Burkholderia vietnamiensis (strain G4 / LMG 22486) GN=gcvP PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.065e-33
Identity = 85/178 (47.75%), Postives = 108/178 (60.67%), Query Frame = 1
Query:    1 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKV----KCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFA---GGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXF 513
            TIA RV+ +A   A G+K+LG   V    FFDT+ +    + A  HA A+A     +NLR V    V  S DETTT +D+  L  VFA   GG +    A         A+P+GL R S YLTH VFN++H+E E+LRY+  L  K+L+L  SMIPLGSCTMKLNAT+ M+PVTWP F
Sbjct:  372 TIALRVNRIAALLAAGVKQLGFTTVNDT-FFDTLTIDAGARTAQLHAFANAK---RINLRRVSDTQVGVSVDETTTRDDLADLLAVFAQAAGGTAPDVDALDAGLPGVAALPAGLERTSAYLTHHVFNRHHSETEMLRYLRSLSDKDLALDRSMIPLGSCTMKLNATSEMLPVTWPEF 545          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_BURCJ (Glycine dehydrogenase [decarboxylating] OS=Burkholderia cepacia (strain J2315 / LMG 16656) GN=gcvP PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.065e-33
Identity = 85/178 (47.75%), Postives = 108/178 (60.67%), Query Frame = 1
Query:    1 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKV----KCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFA---GGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXF 513
            TIA RV+ +A  FA G+K+LG   V    FFDT+ +    + A  H  A A     +NLR V +  V  S DETTT +D+  L  VFA   GG +    A         A+P+GL R S YLTH VFN++H+E E+LRY+  L  K+L+L  SMIPLGSCTMKLNAT+ M+PVTWP F
Sbjct:  372 TIALRVNRIAALFAAGVKQLGFATVNDT-FFDTLTIDTGARTAQVHEFAKAK---RINLRRVSATQVGVSVDETTTRDDLADLLDVFAQAAGGTAPAVDALDAGLAGVAALPAGLERTSAYLTHHVFNRHHSETEMLRYLRSLSDKDLALDRSMIPLGSCTMKLNATSEMLPVTWPEF 545          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_VIBPA (Glycine dehydrogenase [decarboxylating] OS=Vibrio parahaemolyticus GN=gcvP PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.934e-33
Identity = 76/174 (43.68%), Postives = 105/174 (60.34%), Query Frame = 1
Query:    1 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFAT 519
            TIA+R H +    A GL K G  E+    FFDT+ +   +    + + A   ++NLRV+    +  S DETTT+ DV+ LF +F   + V   +  +A     AIP  L R S YLTHPVFN YH+E +++RY+  L++K+ SL H MIPLGSCTMKLNA   M+P+TWP F +
Sbjct:  357 TIARRTHHMTAILAAGLTK-GGFELAHNSFFDTITINTGEKTQDLYTKALAADINLRVLPGK-LGISLDETTTVADVEALFAIFGVKEDVTALSTEVAGNEFAAIPEALRRTSEYLTHPVFNTYHSETQMMRYLKQLENKDFSLTHGMIPLGSCTMKLNAAAEMIPITWPEFGS 528          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_PSEU2 (Glycine dehydrogenase [decarboxylating] OS=Pseudomonas syringae pv. syringae (strain B728a) GN=gcvP PE=3 SV=1)

HSP 1 Score: 140.969 bits (354), Expect = 6.934e-33
Identity = 81/172 (47.09%), Postives = 110/172 (63.95%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIE-MNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG-GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXF 513
            IA RVH L    A GL  LG    Q   FFD++ +   D  A   AA +   +NLR +D   +  S DETT+   V+ L+ +FA  G+S+P  AA LA+ V++ +P+GL R+S  L+HPVFN+YH+E EL+RY+  L  K+L+L  +MIPLGSCTMKLNA + M+PVTW  F
Sbjct:  359 IANRVHQLTAILAEGLSTLGLNAEQAF-FFDSLTLHTGDRTAALHAAARARHINLREIDDQRLGLSLDETTSQSAVETLWAIFANDGQSLPDFAA-LADSVQSRLPAGLLRQSAILSHPVFNRYHSETELMRYLRKLADKDLALDRTMIPLGSCTMKLNAASEMIPVTWAEF 528          
The following BLAST results are available for this feature:
BLAST of EY753823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 252
Match NameE-valueIdentityDescription
GCSP_VIBCM8.191e-3447.09Glycine dehydrogenase [decarboxylating] OS=Vibrio ... [more]
GCSP_VIBC38.191e-3447.09Glycine dehydrogenase [decarboxylating] OS=Vibrio ... [more]
GCSP_SHELP1.397e-3346.82Glycine dehydrogenase [decarboxylating] OS=Shewane... [more]
GCSP_NOSP71.397e-3346.89Glycine dehydrogenase [decarboxylating] OS=Nostoc ... [more]
GCSP_CHRVO2.383e-3347.95Glycine dehydrogenase [decarboxylating] OS=Chromob... [more]
GCSP_ERWCT4.065e-3345.98Glycine dehydrogenase [decarboxylating] OS=Erwinia... [more]
GCSP_BURVG4.065e-3347.75Glycine dehydrogenase [decarboxylating] OS=Burkhol... [more]
GCSP_BURCJ4.065e-3347.75Glycine dehydrogenase [decarboxylating] OS=Burkhol... [more]
GCSP_VIBPA6.934e-3343.68Glycine dehydrogenase [decarboxylating] OS=Vibrio ... [more]
GCSP_PSEU26.934e-3347.09Glycine dehydrogenase [decarboxylating] OS=Pseudom... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-007-C11-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753823 ID=EY753823; Name=EY753823; organism=Citrus sinensis; type=EST; length=759bp
ACCATTGCTCAAAGAGTCCATGGACTAGCCGGGACTTTCGCCCTTGGGTT
AAAAAAGCTGGGGACAGTGGAAGTCCAGGGGCTTCCCTTCTTTGACACTG
TGAAGGTGAAGTGTGCGGATGCACATGCCATTGCCAGTGCTGCTTACAAG
ATTGAAATGAATCTTCGGGTTGTAGATTCCAACACCGTCACTGCTTCCTT
TGATGAAACAACCACCTTGGAGGATGTTGATAAGCTTTTCATAGTTTTCG
CTGGGGGCAAATCAGTTCCATTCACTGCTGCATCTCTGGCTGAAGAGGTT
GAGACTGCAATTCCGTCTGGATTAACAAGGGAGAGTCCGTATCTGACACA
TCCTGTTTTTAACAAATACCACACAGAGCATGAATTGCTTAGATACATTC
ATCTGTTACAATCAAAGGAGCTCTCACTATGCCATAGTATGATTCCATTG
GGATCTTGTACAATGAAATTGAATGCAACAAACTGAATGATGCCAGTGAC
ATGGCCTANCTTTGCTACATACACCCTTTTGCCCCTGCTGACCAGGCTCA
GGNTTATCANGAAATGTTTACAATCTGGGTGAGTGGCTGTGTACCATTAC
TGGGGCTTGACTCTTCTCTTGCACCAAATGCNTGTGCANCTGGTGAGTAT
GCTGGGCTCATGGNTATCCGCGCTTATCATAAGGCAAGAGAGACATCACG
GNATGTGGCATTATACCGTGTCAGCCATGGAACATNCTGCTCTGCTGCCA
TGTTGGATG
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