EY753823

Overview
NameEY753823
Unique NameEY753823
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length759
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12632 contig Csv1_Contig12632:365..1127. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_XYLFT (Glycine dehydrogenase [decarboxylating] OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=gcvP PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.635e-32
Identity = 82/171 (47.95%), Postives = 103/171 (60.23%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA R H +A   A  L+  G     G  FFDT+ +   DA AI  AA    MNLR++D+  +  S DET T  DV  L  VF     V    A  A+    A+P+GL R S +LTHPVFN +H+EHELLRY+ +L  K+L++  +MIPLGSCTMKLNAT  M+PVTW  FA
Sbjct:  374 IAWRTHRMAAILAAALRGAGLTV--GEYFFDTLHIVGIDALAIHCAAAAAGMNLRMIDNAQIGISLDETVTRSDVVALGQVFGVQVDVEALDAITAD----ALPAGLLRSSAFLTHPVFNTHHSEHELLRYLRMLADKDLAMDRTMIPLGSCTMKLNATAEMIPVTWQEFA 538          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_MOUSE (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Mus musculus GN=Gldc PE=1 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.635e-32
Identity = 74/172 (43.02%), Postives = 105/172 (61.05%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCA-DAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA+RVH      + GLK+ G  ++Q   FFDT+KV+C      +   A + ++N R+ D  T+  S DET T +D+D L  +F    S    A  + EE    + S   R SP+LTH VFN YH+E  L+RY+  L++K++SL HSMIPLGSCTMKLN+++ + P+TW  FA
Sbjct:  412 IAKRVHNATLILSEGLKRAGH-QLQHDLFFDTLKVQCGCSVKEVLGRAAQRQINFRLFDDGTLGISLDETVTEKDLDDLLWIFGCESSAELVAEGMGEERRGLLGSSFKRTSPFLTHQVFNSYHSETNLVRYMKKLENKDISLVHSMIPLGSCTMKLNSSSELAPITWREFA 582          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_BURCH (Glycine dehydrogenase [decarboxylating] OS=Burkholderia cenocepacia (strain HI2424) GN=gcvP PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.635e-32
Identity = 84/178 (47.19%), Postives = 106/178 (59.55%), Query Frame = 1
Query:    1 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKV----KCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFA---GGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXF 513
            TIA RV+ +A   A G+K+LG   V    FFDT+ +    + A  H  A A     +NLR V    V  S DETTT +D+  L  VFA   GG +    A         A+P+GL R S YLTH VFN++H+E E+LRY+  L  K+L+L  SMIPLGSCTMKLNAT+ M+PVTWP F
Sbjct:  372 TIALRVNRIAALLAAGVKQLGFATVNDT-FFDTLTIDTGARTAQVHEFAKAK---RINLRRVSDTQVGVSVDETTTRDDLADLLDVFAQAAGGTAPAVDALDAGLAGVAALPAGLERTSAYLTHHVFNRHHSETEMLRYLRSLSDKDLALDRSMIPLGSCTMKLNATSEMLPVTWPEF 545          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_BURCC (Glycine dehydrogenase [decarboxylating] OS=Burkholderia cenocepacia (strain MC0-3) GN=gcvP PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.635e-32
Identity = 84/178 (47.19%), Postives = 106/178 (59.55%), Query Frame = 1
Query:    1 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKV----KCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFA---GGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXF 513
            TIA RV+ +A   A G+K+LG   V    FFDT+ +    + A  H  A A     +NLR V    V  S DETTT +D+  L  VFA   GG +    A         A+P+GL R S YLTH VFN++H+E E+LRY+  L  K+L+L  SMIPLGSCTMKLNAT+ M+PVTWP F
Sbjct:  372 TIALRVNRIAALLAAGVKQLGFATVNDT-FFDTLTIDTGARTAQVHEFAKAK---RINLRRVSDTQVGVSVDETTTRDDLADLLDVFAQAAGGTAPAVDALDAGLAGVAALPAGLERTSAYLTHHVFNRHHSETEMLRYLRSLSDKDLALDRSMIPLGSCTMKLNATSEMLPVTWPEF 545          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_BURCA (Glycine dehydrogenase [decarboxylating] OS=Burkholderia cenocepacia (strain AU 1054) GN=gcvP PE=3 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.635e-32
Identity = 84/178 (47.19%), Postives = 106/178 (59.55%), Query Frame = 1
Query:    1 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKV----KCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFA---GGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXF 513
            TIA RV+ +A   A G+K+LG   V    FFDT+ +    + A  H  A A     +NLR V    V  S DETTT +D+  L  VFA   GG +    A         A+P+GL R S YLTH VFN++H+E E+LRY+  L  K+L+L  SMIPLGSCTMKLNAT+ M+PVTWP F
Sbjct:  372 TIALRVNRIAALLAAGVKQLGFATVNDT-FFDTLTIDTGARTAQVHEFAKAK---RINLRRVSDTQVGVSVDETTTRDDLADLLDVFAQAAGGTAPAVDALDAGLAGVAALPAGLERTSAYLTHHVFNRHHSETEMLRYLRSLSDKDLALDRSMIPLGSCTMKLNATSEMLPVTWPEF 545          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_SHEB9 (Glycine dehydrogenase [decarboxylating] OS=Shewanella baltica (strain OS195) GN=gcvP PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.441e-32
Identity = 78/175 (44.57%), Postives = 104/175 (59.43%), Query Frame = 1
Query:    1 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG---GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            TIA R++  A   A GL+  G V +    +FDT+ +K  D  A+ + A   EMNLR     TV  S DETT   D+D LF V  G   G  V    A +  +   +IP+ L R+   L+HP FN+Y +E E++RYI  L+SK+L+L +SMI LGSCTMKLNA   M+PV+WP FA
Sbjct:  359 TIASRINRFADILAAGLQAKG-VSLVNSTWFDTISIKGLDVAAVNARALAAEMNLRFDTDGTVGISLDETTLRTDIDALFDVILGAGHGLDVAALDAQIVSQGSQSIPAALVRQDAILSHPTFNRYQSETEMMRYIKRLESKDLALNYSMISLGSCTMKLNAAVEMLPVSWPEFA 532          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_SERP5 (Glycine dehydrogenase [decarboxylating] OS=Serratia proteamaculans (strain 568) GN=gcvP PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.441e-32
Identity = 74/174 (42.53%), Postives = 110/174 (63.22%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG---GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA R+H L    A GL++ G ++++   +FDT+ V+  D  A+   A    +NLR      V  + DE T+ EDV  LF + AG   G  +    A++++  ++ IP+G+ R+ P LTHPVFN YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA   M+P+TWP F+
Sbjct:  360 IAGRIHRLTDILAAGLQQAG-LQLRHKTWFDTLTVEVKDKAAVLERALSFGINLRTDIHGAVGITLDEATSREDVQTLFALLAGDNHGLDIDALDAAVSKNSQS-IPAGMLRKDPILTHPVFNSYHSETEMMRYMHRLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFS 531          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_SALHS (Glycine dehydrogenase [decarboxylating] OS=Salmonella heidelberg (strain SL476) GN=gcvP PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.441e-32
Identity = 78/174 (44.83%), Postives = 111/174 (63.79%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEV---ETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA R+H L    A GL++ G ++++   +FDT+ V+ AD  A+ + A   E+NLR    N V  + DETTT E+V +LF V  GG S      +L ++V     +I   + R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA   M+P+TWP FA
Sbjct:  360 IANRIHRLTDILAAGLQQKG-LKLRHAHYFDTLCVEVADKAAVLARAEAAEINLRSDIHNAVGITLDETTTRENVAQLFNVLLGG-SHGLNIETLDKDVALDSRSIQQSMLRDDAILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFA 531          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_SALG2 (Glycine dehydrogenase [decarboxylating] OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=gcvP PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.441e-32
Identity = 78/174 (44.83%), Postives = 111/174 (63.79%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEV---ETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA R+H L    A GL++ G ++++   +FDT+ V+ AD  A+ + A   E+NLR    N V  + DETTT E+V +LF V  GG S      +L ++V     +I   + R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA   M+P+TWP FA
Sbjct:  360 IANRIHRLTDILAAGLQQKG-LKLRHAHYFDTLCVEVADKAAVLARAEAAEINLRSDIHNAVGITLDETTTRENVAQLFNVLLGG-SHGLNIETLDKDVALDSRSIQQSMLRDDAILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFA 531          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_SALEP (Glycine dehydrogenase [decarboxylating] OS=Salmonella enteritidis PT4 (strain P125109) GN=gcvP PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.441e-32
Identity = 78/174 (44.83%), Postives = 111/174 (63.79%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEV---ETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA R+H L    A GL++ G ++++   +FDT+ V+ AD  A+ + A   E+NLR    N V  + DETTT E+V +LF V  GG S      +L ++V     +I   + R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA   M+P+TWP FA
Sbjct:  360 IANRIHRLTDILAAGLQQKG-LKLRHAHYFDTLCVEVADKAAVLARAEAAEINLRSDIHNAVGITLDETTTRENVAQLFNVLLGG-SHGLNIETLDKDVALDSRSIQQSMLRDDAILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFA 531          
The following BLAST results are available for this feature:
BLAST of EY753823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 252
Match NameE-valueIdentityDescription
GCSP_XYLFT2.635e-3247.95Glycine dehydrogenase [decarboxylating] OS=Xylella... [more]
GCSP_MOUSE2.635e-3243.02Glycine dehydrogenase [decarboxylating], mitochond... [more]
GCSP_BURCH2.635e-3247.19Glycine dehydrogenase [decarboxylating] OS=Burkhol... [more]
GCSP_BURCC2.635e-3247.19Glycine dehydrogenase [decarboxylating] OS=Burkhol... [more]
GCSP_BURCA2.635e-3247.19Glycine dehydrogenase [decarboxylating] OS=Burkhol... [more]
GCSP_SHEB93.441e-3244.57Glycine dehydrogenase [decarboxylating] OS=Shewane... [more]
GCSP_SERP53.441e-3242.53Glycine dehydrogenase [decarboxylating] OS=Serrati... [more]
GCSP_SALHS3.441e-3244.83Glycine dehydrogenase [decarboxylating] OS=Salmone... [more]
GCSP_SALG23.441e-3244.83Glycine dehydrogenase [decarboxylating] OS=Salmone... [more]
GCSP_SALEP3.441e-3244.83Glycine dehydrogenase [decarboxylating] OS=Salmone... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-007-C11-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753823 ID=EY753823; Name=EY753823; organism=Citrus sinensis; type=EST; length=759bp
ACCATTGCTCAAAGAGTCCATGGACTAGCCGGGACTTTCGCCCTTGGGTT
AAAAAAGCTGGGGACAGTGGAAGTCCAGGGGCTTCCCTTCTTTGACACTG
TGAAGGTGAAGTGTGCGGATGCACATGCCATTGCCAGTGCTGCTTACAAG
ATTGAAATGAATCTTCGGGTTGTAGATTCCAACACCGTCACTGCTTCCTT
TGATGAAACAACCACCTTGGAGGATGTTGATAAGCTTTTCATAGTTTTCG
CTGGGGGCAAATCAGTTCCATTCACTGCTGCATCTCTGGCTGAAGAGGTT
GAGACTGCAATTCCGTCTGGATTAACAAGGGAGAGTCCGTATCTGACACA
TCCTGTTTTTAACAAATACCACACAGAGCATGAATTGCTTAGATACATTC
ATCTGTTACAATCAAAGGAGCTCTCACTATGCCATAGTATGATTCCATTG
GGATCTTGTACAATGAAATTGAATGCAACAAACTGAATGATGCCAGTGAC
ATGGCCTANCTTTGCTACATACACCCTTTTGCCCCTGCTGACCAGGCTCA
GGNTTATCANGAAATGTTTACAATCTGGGTGAGTGGCTGTGTACCATTAC
TGGGGCTTGACTCTTCTCTTGCACCAAATGCNTGTGCANCTGGTGAGTAT
GCTGGGCTCATGGNTATCCGCGCTTATCATAAGGCAAGAGAGACATCACG
GNATGTGGCATTATACCGTGTCAGCCATGGAACATNCTGCTCTGCTGCCA
TGTTGGATG
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