EY753823

Overview
NameEY753823
Unique NameEY753823
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length759
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12632 contig Csv1_Contig12632:365..1127. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_SALDC (Glycine dehydrogenase [decarboxylating] OS=Salmonella dublin (strain CT_02021853) GN=gcvP PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.441e-32
Identity = 78/174 (44.83%), Postives = 111/174 (63.79%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEV---ETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA R+H L    A GL++ G ++++   +FDT+ V+ AD  A+ + A   E+NLR    N V  + DETTT E+V +LF V  GG S      +L ++V     +I   + R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA   M+P+TWP FA
Sbjct:  360 IANRIHRLTDILAAGLQQKG-LKLRHAHYFDTLCVEVADKAAVLARAEAAEINLRSDIHNAVGITLDETTTRENVAQLFNVLLGG-SHGLNIETLDKDVALDSRSIQQSMLRDDAILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFA 531          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_PECCP (Glycine dehydrogenase [decarboxylating] OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=gcvP PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.441e-32
Identity = 77/174 (44.25%), Postives = 110/174 (63.22%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG---GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA R+H L    A GL + G + ++   +FDT+ ++ AD  A+ S A    +NLR   ++ V  + DE TT EDV  LF V  G   G  +    A+++++  T IP+GL R+   L+HPVFN+YH+E E++RY+H L  K+L+L  +MIPLGSCTMKLNA   M+P+TWP FA
Sbjct:  360 IAGRIHRLTDILAAGLTQGGLL-LRHRSWFDTLTIEVADKDAVLSRALSFGINLRSDLASAVGITLDEATTREDVLALFAVLLGDDHGLDIGALDAAISQQAAT-IPAGLLRQDAILSHPVFNRYHSETEMMRYLHRLARKDLALNQAMIPLGSCTMKLNAAAEMLPITWPEFA 531          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_DECAR (Glycine dehydrogenase [decarboxylating] OS=Dechloromonas aromatica (strain RCB) GN=gcvP PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.441e-32
Identity = 80/172 (46.51%), Postives = 104/172 (60.47%), Query Frame = 1
Query:    1 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKC-ADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXF 513
            TIA R+H L    A GLK+  +V +    F+DTV     A A ++ + A     NLR V +  +  SFDETTT +DV  LF + A       T  +     ++A+P  L R    L HPVFN +HTEHE+LRY+  LQ+K+L+L HSMI LGSCTMKLNAT+ M+PVTWP F
Sbjct:  359 TIAGRIHRLTAILAEGLKR-ASVNLLTKQFYDTVHFDLGARAESVYNDALAAGYNLRRVSAGVLGISFDETTTRDDVATLFKLIAQTTLDVATIDAQVAAADSALPDSLIRSDAVLQHPVFNTHHTEHEMLRYLKSLQNKDLALDHSMISLGSCTMKLNATSEMIPVTWPEF 529          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_XYLFA (Glycine dehydrogenase [decarboxylating] OS=Xylella fastidiosa GN=gcvP PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.494e-32
Identity = 82/171 (47.95%), Postives = 103/171 (60.23%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA R H +A   A  L+  G     G  FFDT+ +   DA AI  AA    MNLR++D+  +  S DET T  DV  L  VF     V    A  A+    A+P+GL R S +LTHPVFN +H+EHELLRY+ +L  K+L++  +MIPLGSCTMKLNAT  M+PVTW  FA
Sbjct:  374 IAWRTHRMAAILAAALRGAGLTV--GEYFFDTLHIVGIDAVAIHCAAAAAGMNLRMIDNAQLGISLDETVTRSDVVALGQVFGVQVDVEALDAITAD----ALPAGLLRSSAFLTHPVFNTHHSEHELLRYLRMLADKDLAMDRTMIPLGSCTMKLNATAEMIPVTWQEFA 538          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_SALTI (Glycine dehydrogenase [decarboxylating] OS=Salmonella typhi GN=gcvP PE=3 SV=3)

HSP 1 Score: 138.272 bits (347), Expect = 4.494e-32
Identity = 78/174 (44.83%), Postives = 111/174 (63.79%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEV---ETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA R+H L    A GL++ G ++++   +FDT+ V+ AD  A+ + A   E+NLR    N V  + DETTT E+V +LF V  G  S      +L ++V     +I  G+ R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA   M+P+TWP FA
Sbjct:  360 IANRIHRLTDILAAGLQQKG-LKLRHAHYFDTLCVEVADKAAVLARAEAAEINLRSDIHNAVGITLDETTTRENVAQLFNVLLGD-SHGLNIETLDKDVALDSRSIQQGMLRDDAILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFA 531          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_SHESH (Glycine dehydrogenase [decarboxylating] OS=Shewanella sediminis (strain HAW-EB3) GN=gcvP PE=3 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 5.870e-32
Identity = 76/173 (43.93%), Postives = 102/173 (58.96%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG---GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXF 513
            IA+R+H L    A GL   G   V G  +FDT+ +K  D+ AI + A    +NLR+     +  S  ETT  ED+ +LF V  G   G  V    A + +   ++IP+ L R    LTHP FN YH+E E++RYI  L++K+L+L HSMI LGSCTMKLNA   MMP++WP F
Sbjct:  360 IAERIHRLTDILASGLTAKGVELVNGT-WFDTLSLKATDSEAITARAVAAGINLRIDSDGVLGVSLAETTLREDIAELFDVILGEGHGLDVAALDAEIIKAGSSSIPAQLVRTDAILTHPTFNSYHSETEMMRYIKRLENKDLALNHSMISLGSCTMKLNAATEMMPISWPEF 531          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_SHEHH (Glycine dehydrogenase [decarboxylating] OS=Shewanella halifaxensis (strain HAW-EB4) GN=gcvP PE=3 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 7.666e-32
Identity = 81/178 (45.51%), Postives = 107/178 (60.11%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASF----DETTTLEDVDKLFIVFAGGKSVPFTAASLAEEV----ETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXF 513
            IA+R+H L    A GL   G +E+    +FDT+ VK  D  AI + A   ++NLR+  +N    SF    DETTT  DV +LF V  G +      A+L E++      +IPS L R    LTHP FN+YH+E E++RYI  L++K+L+L HSMI LGSCTMKLNA   MMPV+W  F
Sbjct:  360 IAERIHRLTDILAAGLTAKG-LELVNSTWFDTITVKGGDVAAINARALAAQINLRIDSANDNAGSFGISLDETTTRTDVSELFDVILGSEH-GLDVAALDEQIIKADSASIPSELVRTDAILTHPTFNRYHSETEMMRYIKRLENKDLALNHSMISLGSCTMKLNAATEMMPVSWAEF 535          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_SHEB8 (Glycine dehydrogenase [decarboxylating] OS=Shewanella baltica (strain OS185) GN=gcvP PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.001e-31
Identity = 77/175 (44.00%), Postives = 104/175 (59.43%), Query Frame = 1
Query:    1 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG---GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            TIA R++  A   A GL+  G V +    +FDT+ +K  D  A+ + A   EMNLR     TV  S DETT   D++ LF V  G   G  V    A +  +   +IP+ L R+   L+HP FN+Y +E E++RYI  L+SK+L+L +SMI LGSCTMKLNA   M+PV+WP FA
Sbjct:  359 TIASRINRFADILAAGLQAKG-VSLVNSTWFDTISIKGLDVAAVNARALAAEMNLRFDADGTVGVSLDETTLRTDIEALFDVILGADHGLDVAALDAQIVSQGSQSIPAALVRQDAILSHPTFNRYQSETEMMRYIKRLESKDLALNYSMISLGSCTMKLNAAVEMLPVSWPEFA 532          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_SHEB5 (Glycine dehydrogenase [decarboxylating] OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=gcvP PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 1.001e-31
Identity = 77/175 (44.00%), Postives = 104/175 (59.43%), Query Frame = 1
Query:    1 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG---GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            TIA R++  A   A GL+  G V +    +FDT+ +K  D  A+ + A   EMNLR     TV  S DETT   D++ LF V  G   G  V    A +  +   +IP+ L R+   L+HP FN+Y +E E++RYI  L+SK+L+L +SMI LGSCTMKLNA   M+PV+WP FA
Sbjct:  359 TIASRINRFADILAAGLQAKG-VSLVNSTWFDTISIKGLDVAAVNARALAAEMNLRFDADGTVGVSLDETTLRTDIEALFDVILGAGHGLDVAALDAQIVSQGSQSIPAALVRQDAILSHPTFNRYQSETEMMRYIKRLESKDLALNYSMISLGSCTMKLNAAVEMLPVSWPEFA 532          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_SHEON (Glycine dehydrogenase [decarboxylating] OS=Shewanella oneidensis GN=gcvP PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.708e-31
Identity = 78/175 (44.57%), Postives = 103/175 (58.86%), Query Frame = 1
Query:    1 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG---GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            TIA R++  A   A GL+  G V +    +FDT+ +K  D  A+ + A   EMNLR      V  S DETT   D+D LF V  G   G  V    A +  +   +IP+ L RE   L+HP FN+Y +E E++RYI  L+SK+L+L +SMI LGSCTMKLNA   M+PV+WP FA
Sbjct:  359 TIASRINRFADILAAGLQAKG-VSLVNNTWFDTISIKGLDVAAVNARALAAEMNLRFDADGIVGVSLDETTIRTDIDALFEVILGAGHGLDVAALDAQIVAQGSQSIPASLVREDAILSHPTFNRYQSETEMMRYIKRLESKDLALNYSMISLGSCTMKLNAAVEMIPVSWPEFA 532          
The following BLAST results are available for this feature:
BLAST of EY753823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 252
Match NameE-valueIdentityDescription
GCSP_SALDC3.441e-3244.83Glycine dehydrogenase [decarboxylating] OS=Salmone... [more]
GCSP_PECCP3.441e-3244.25Glycine dehydrogenase [decarboxylating] OS=Pectoba... [more]
GCSP_DECAR3.441e-3246.51Glycine dehydrogenase [decarboxylating] OS=Dechlor... [more]
GCSP_XYLFA4.494e-3247.95Glycine dehydrogenase [decarboxylating] OS=Xylella... [more]
GCSP_SALTI4.494e-3244.83Glycine dehydrogenase [decarboxylating] OS=Salmone... [more]
GCSP_SHESH5.870e-3243.93Glycine dehydrogenase [decarboxylating] OS=Shewane... [more]
GCSP_SHEHH7.666e-3245.51Glycine dehydrogenase [decarboxylating] OS=Shewane... [more]
GCSP_SHEB81.001e-3144.00Glycine dehydrogenase [decarboxylating] OS=Shewane... [more]
GCSP_SHEB51.001e-3144.00Glycine dehydrogenase [decarboxylating] OS=Shewane... [more]
GCSP_SHEON1.708e-3144.57Glycine dehydrogenase [decarboxylating] OS=Shewane... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-007-C11-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753823 ID=EY753823; Name=EY753823; organism=Citrus sinensis; type=EST; length=759bp
ACCATTGCTCAAAGAGTCCATGGACTAGCCGGGACTTTCGCCCTTGGGTT
AAAAAAGCTGGGGACAGTGGAAGTCCAGGGGCTTCCCTTCTTTGACACTG
TGAAGGTGAAGTGTGCGGATGCACATGCCATTGCCAGTGCTGCTTACAAG
ATTGAAATGAATCTTCGGGTTGTAGATTCCAACACCGTCACTGCTTCCTT
TGATGAAACAACCACCTTGGAGGATGTTGATAAGCTTTTCATAGTTTTCG
CTGGGGGCAAATCAGTTCCATTCACTGCTGCATCTCTGGCTGAAGAGGTT
GAGACTGCAATTCCGTCTGGATTAACAAGGGAGAGTCCGTATCTGACACA
TCCTGTTTTTAACAAATACCACACAGAGCATGAATTGCTTAGATACATTC
ATCTGTTACAATCAAAGGAGCTCTCACTATGCCATAGTATGATTCCATTG
GGATCTTGTACAATGAAATTGAATGCAACAAACTGAATGATGCCAGTGAC
ATGGCCTANCTTTGCTACATACACCCTTTTGCCCCTGCTGACCAGGCTCA
GGNTTATCANGAAATGTTTACAATCTGGGTGAGTGGCTGTGTACCATTAC
TGGGGCTTGACTCTTCTCTTGCACCAAATGCNTGTGCANCTGGTGAGTAT
GCTGGGCTCATGGNTATCCGCGCTTATCATAAGGCAAGAGAGACATCACG
GNATGTGGCATTATACCGTGTCAGCCATGGAACATNCTGCTCTGCTGCCA
TGTTGGATG
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