EY753823

Overview
NameEY753823
Unique NameEY753823
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length759
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12632 contig Csv1_Contig12632:365..1127. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_DICDI (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Dictyostelium discoideum GN=gcvP PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.708e-31
Identity = 80/176 (45.45%), Postives = 103/176 (58.52%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCAD-AHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAAS---LAEEVET--AIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXF 513
            IA  VH  A   A G+K+LG   V   PFFDTV +   D    +       ++N+R   S +++ S DET T  D+  L   F+   S P   +S   L +E  T   I     R++P+LTHP+FN+YH+EHELLRYIH LQ K+L L  +MIPLGSCTMKLNAT  M PV+WP F
Sbjct:  390 IANAVHRKAIILAEGIKRLGYT-VLDRPFFDTVLIITGDKTDMMIKELESRQINVRQYCSKSISISLDETVTSADISALLNGFSAHASKPLGLSSPEQLEKETSTISVISEEFARQTPFLTHPIFNRYHSEHELLRYIHKLQKKDLGLTTAMIPLGSCTMKLNATTEMYPVSWPEF 564          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP1_PSEPK (Glycine dehydrogenase [decarboxylating] 1 OS=Pseudomonas putida (strain KT2440) GN=gcvP1 PE=3 SV=1)

HSP 1 Score: 136.346 bits (342), Expect = 1.708e-31
Identity = 81/172 (47.09%), Postives = 107/172 (62.21%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHA-IASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVP-FTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXF 513
            IA+R H L    A GLK LG V+V G   FDT+ +    A A +   A    +NLR +D+  V  S DET+T  DV+ L+ +  G ++ P FTA  LA    + +P+ L R+S  L HPVFN+YH+E EL+RY+  L  K+L+L  SMIPLGSCTMKLNA + M+PVTW  F
Sbjct:  357 IAERTHALTAILAAGLKALG-VQVVGASAFDTLTLATGTATASLHDKARAQGINLRQIDAAHVGLSLDETSTQADVESLWQLLGGEQAQPDFTA--LAASTGSLLPAALLRQSAILEHPVFNRYHSETELMRYLRRLADKDLALDRSMIPLGSCTMKLNAASEMIPVTWAEF 525          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_SALTY (Glycine dehydrogenase [decarboxylating] OS=Salmonella typhimurium GN=gcvP PE=3 SV=3)

HSP 1 Score: 135.961 bits (341), Expect = 2.231e-31
Identity = 77/174 (44.25%), Postives = 110/174 (63.22%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEV---ETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA R+H L    A GL++ G ++++   +FDT+ V+ AD  A+ + A   E+NLR    N V  + DETTT E+V +LF V  G  S      +L ++V     +I   + R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA   M+P+TWP FA
Sbjct:  360 IANRIHRLTDILAAGLQQKG-LKLRHAHYFDTLCVEVADKAAVLARAEAAEINLRSDIHNAVGITLDETTTRENVAQLFNVLLGD-SHGLNIETLDKDVALDSRSIQQSMLRDDAILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFA 531          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_SALPC (Glycine dehydrogenase [decarboxylating] OS=Salmonella paratyphi C (strain RKS4594) GN=gcvP PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.231e-31
Identity = 77/174 (44.25%), Postives = 110/174 (63.22%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEV---ETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA R+H L    A GL++ G ++++   +FDT+ V+ AD  A+ + A   E+NLR    N V  + DETTT E+V +LF V  G  S      +L ++V     +I   + R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA   M+P+TWP FA
Sbjct:  360 IANRIHRLTDILAAGLQQKG-LKLRHAHYFDTLCVEVADKAAVLARAEAAEINLRSDIHNAVGITLDETTTRENVAQLFNVLLGD-SHGLNIETLDKDVALDSRSIQQSMLRDDAILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFA 531          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_SALPB (Glycine dehydrogenase [decarboxylating] OS=Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7) GN=gcvP PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.231e-31
Identity = 77/174 (44.25%), Postives = 110/174 (63.22%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEV---ETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA R+H L    A GL++ G ++++   +FDT+ V+ AD  A+ + A   E+NLR    N V  + DETTT E+V +LF V  G  S      +L ++V     +I   + R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA   M+P+TWP FA
Sbjct:  360 IANRIHRLTDILAAGLQQKG-LKLRHAHYFDTLCVEVADKAAVLARAEAAEINLRSDIHNAVGITLDETTTRENVAQLFNVLLGD-SHGLNIETLDKDVALDSRSIQQSMLRDDAILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFA 531          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_SALNS (Glycine dehydrogenase [decarboxylating] OS=Salmonella newport (strain SL254) GN=gcvP PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.231e-31
Identity = 77/174 (44.25%), Postives = 110/174 (63.22%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEV---ETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA R+H L    A GL++ G ++++   +FDT+ V+ AD  A+ + A   E+NLR    N V  + DETTT E+V +LF V  G  S      +L ++V     +I   + R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA   M+P+TWP FA
Sbjct:  360 IANRIHRLTDILAAGLQQKG-LKLRHAHYFDTLCVEVADKAAVLARAEAAEINLRSDIHNAVGITLDETTTRENVAQLFNVLLGD-SHGLNIETLDKDVALDSRSIQQSMLRDDAILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFA 531          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_SALAR (Glycine dehydrogenase [decarboxylating] OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=gcvP PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.231e-31
Identity = 75/174 (43.10%), Postives = 111/174 (63.79%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG---GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IAQR+H L    A GL++ G ++++   +FDT+ V+ AD  A+ + A   E+NLR    N V  + DETTT ++V +LF +  G   G ++      +A +   +I   + R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA   M+P+TWP FA
Sbjct:  360 IAQRIHRLTDILAAGLQQKG-LKLRHAHYFDTLCVEVADKAAVLARAEAAEINLRSDIHNAVGITLDETTTRDNVLQLFTILLGDDHGLNIETLDKDVALD-SRSIQQSMLRDDAVLTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFA 531          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_SALA4 (Glycine dehydrogenase [decarboxylating] OS=Salmonella agona (strain SL483) GN=gcvP PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.231e-31
Identity = 77/174 (44.25%), Postives = 110/174 (63.22%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEV---ETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA R+H L    A GL++ G ++++   +FDT+ V+ AD  A+ + A   E+NLR    N V  + DETTT E+V +LF V  G  S      +L ++V     +I   + R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA   M+P+TWP FA
Sbjct:  360 IANRIHRLTDILAAGLQQKG-LKLRHAHYFDTLCVEVADKAAVLARAEAAEINLRSDIHNAVGITLDETTTRENVAQLFNVLLGD-SHGLNIETLDKDVALDSRSIQQSMLRDDAILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFA 531          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_CITK8 (Glycine dehydrogenase [decarboxylating] OS=Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=gcvP PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.231e-31
Identity = 76/174 (43.68%), Postives = 110/174 (63.22%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG---GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA R+H L    A GL++ G ++++   +FDT+ V+ AD  A+ + A   E+NLR    N V  + DETTT E+V +LF V  G   G ++      +A +   +I   + R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA   M+P+TWP FA
Sbjct:  360 IANRIHRLTDILAAGLQQKG-LKLRHAHYFDTLCVEVADKAAVLARAEVAEINLRSDIHNAVGITLDETTTRENVLQLFSVLLGDDHGLNIDTLDKDVAHD-SRSIQESMLRDDAILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFA 531          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_BORA1 (Glycine dehydrogenase [decarboxylating] OS=Bordetella avium (strain 197N) GN=gcvP PE=3 SV=1)

HSP 1 Score: 135.961 bits (341), Expect = 2.231e-31
Identity = 80/175 (45.71%), Postives = 106/175 (60.57%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAH-AIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGG---KSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA RVH  AG     ++ LG + V+   +FDT+ +    A  A+  AA    +NLR VD+  V  S DET T+ED+  L  VFA G     +   AA+LA E    +P+G  R SP L+HPVF+   +E ++LRY+  L  K+L+L  SMIPLGSCTMKLNAT  M+P+TWP FA
Sbjct:  354 IATRVHTFAGVLRQHVQALG-LTVENDSYFDTLLINTGPATPAVLRAAECAHINLRRVDAGRVAVSIDETVTVEDLQALINVFAAGLGKDDITLDAATLAPEA--GLPAGTVRTSPILSHPVFSSVQSETDMLRYLRKLADKDLALDRSMIPLGSCTMKLNATAEMIPITWPEFA 525          
The following BLAST results are available for this feature:
BLAST of EY753823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 252
Match NameE-valueIdentityDescription
GCSP_DICDI1.708e-3145.45Glycine dehydrogenase [decarboxylating], mitochond... [more]
GCSP1_PSEPK1.708e-3147.09Glycine dehydrogenase [decarboxylating] 1 OS=Pseud... [more]
GCSP_SALTY2.231e-3144.25Glycine dehydrogenase [decarboxylating] OS=Salmone... [more]
GCSP_SALPC2.231e-3144.25Glycine dehydrogenase [decarboxylating] OS=Salmone... [more]
GCSP_SALPB2.231e-3144.25Glycine dehydrogenase [decarboxylating] OS=Salmone... [more]
GCSP_SALNS2.231e-3144.25Glycine dehydrogenase [decarboxylating] OS=Salmone... [more]
GCSP_SALAR2.231e-3143.10Glycine dehydrogenase [decarboxylating] OS=Salmone... [more]
GCSP_SALA42.231e-3144.25Glycine dehydrogenase [decarboxylating] OS=Salmone... [more]
GCSP_CITK82.231e-3143.68Glycine dehydrogenase [decarboxylating] OS=Citroba... [more]
GCSP_BORA12.231e-3145.71Glycine dehydrogenase [decarboxylating] OS=Bordete... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-007-C11-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753823 ID=EY753823; Name=EY753823; organism=Citrus sinensis; type=EST; length=759bp
ACCATTGCTCAAAGAGTCCATGGACTAGCCGGGACTTTCGCCCTTGGGTT
AAAAAAGCTGGGGACAGTGGAAGTCCAGGGGCTTCCCTTCTTTGACACTG
TGAAGGTGAAGTGTGCGGATGCACATGCCATTGCCAGTGCTGCTTACAAG
ATTGAAATGAATCTTCGGGTTGTAGATTCCAACACCGTCACTGCTTCCTT
TGATGAAACAACCACCTTGGAGGATGTTGATAAGCTTTTCATAGTTTTCG
CTGGGGGCAAATCAGTTCCATTCACTGCTGCATCTCTGGCTGAAGAGGTT
GAGACTGCAATTCCGTCTGGATTAACAAGGGAGAGTCCGTATCTGACACA
TCCTGTTTTTAACAAATACCACACAGAGCATGAATTGCTTAGATACATTC
ATCTGTTACAATCAAAGGAGCTCTCACTATGCCATAGTATGATTCCATTG
GGATCTTGTACAATGAAATTGAATGCAACAAACTGAATGATGCCAGTGAC
ATGGCCTANCTTTGCTACATACACCCTTTTGCCCCTGCTGACCAGGCTCA
GGNTTATCANGAAATGTTTACAATCTGGGTGAGTGGCTGTGTACCATTAC
TGGGGCTTGACTCTTCTCTTGCACCAAATGCNTGTGCANCTGGTGAGTAT
GCTGGGCTCATGGNTATCCGCGCTTATCATAAGGCAAGAGAGACATCACG
GNATGTGGCATTATACCGTGTCAGCCATGGAACATNCTGCTCTGCTGCCA
TGTTGGATG
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