EY753823

Overview
NameEY753823
Unique NameEY753823
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length759
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig12632 contig Csv1_Contig12632:365..1127. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP2_PSEF5 (Glycine dehydrogenase [decarboxylating] 2 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=gcvP2 PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 2.913e-31
Identity = 77/172 (44.77%), Postives = 108/172 (62.79%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAH-AIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IAQRVH L    A+GL++ G   V    FFDT+ ++   +  AI  +A   ++NLR++    +  S DET     V +LF VF G       +   AE +E+ IP  L R + YLTHPVF+ +H+E E+LRY+  L++K+L+L  SMIPLGSCTMKLNA++ M+P+TWP FA
Sbjct:  357 IAQRVHRLTCILAVGLERHGIARVNR-HFFDTLTLEVGGSQTAIIESARAQQINLRILGRGRLGLSLDETCDESTVTRLFDVFLGADHGLDVSNLDAEALESGIPDPLLRRTRYLTHPVFSAHHSETEMLRYLKQLENKDLALNQSMIPLGSCTMKLNASSEMIPITWPEFA 527          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_YERE8 (Glycine dehydrogenase [decarboxylating] OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain 8081) GN=gcvP PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.805e-31
Identity = 72/174 (41.38%), Postives = 109/174 (62.64%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG---GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA R+H +    A GL++ G + ++   +FDT+ V+  D  A+ + A    +NLR      V  + DETT+ ED+  LF +  G   G  +    A +++  ++ I +G+ R+ P LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA   M+P+TWP FA
Sbjct:  360 IAGRIHRMTDILAAGLQQAG-LALRFTHWFDTLTVEVKDKAAVLARALSFGINLRTDIHGAVGITLDETTSREDLQILFTLLVGDNHGLDIDLLDAKVSQNSQS-IQTGMLRQEPILTHPVFNRYHSETEMMRYMHRLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFA 531          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_SHESM (Glycine dehydrogenase [decarboxylating] OS=Shewanella sp. (strain MR-4) GN=gcvP PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.805e-31
Identity = 77/175 (44.00%), Postives = 101/175 (57.71%), Query Frame = 1
Query:    1 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG---GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            TIA R++      A GL+  G V +    +FDT+ +K  D  A+ + A   EMNLR      V  S DETT   D+D LF V  G   G  V    A +  +   +IP  L R+   LTHP FN+Y +E E++RYI  L+SK+L+L +SMI LGSCTMKLNA   M+PV+WP FA
Sbjct:  359 TIASRINRFTDILAAGLQAKG-VSLVNNTWFDTISIKGLDVAAVNARALAAEMNLRFDADGIVGVSLDETTLRTDIDALFDVILGAGHGLDVAALDAQIVAQGSQSIPEALVRQDAILTHPTFNRYQSETEMMRYIKRLESKDLALNYSMISLGSCTMKLNAAVEMLPVSWPEFA 532          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_ECOSM (Glycine dehydrogenase [decarboxylating] OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=gcvP PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.805e-31
Identity = 76/174 (43.68%), Postives = 109/174 (62.64%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG---GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA R+H L    A GL++ G ++++   +FDT+ V+ AD   + + A   E+NLR    N V  + DETTT E+V +LF V  G   G  +      +A +  +  P+ L R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA   M+P+TWP FA
Sbjct:  360 IANRIHRLTDILAAGLQQKG-LKLRHAHYFDTLCVEVADKEGVLARAEAAEINLRSDILNAVGITLDETTTRENVMQLFSVLLGDNHGLDIDTLDKDVAHDSRSIQPAML-RDDEILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFA 531          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_BURXL (Glycine dehydrogenase [decarboxylating] OS=Burkholderia xenovorans (strain LB400) GN=gcvP PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.805e-31
Identity = 85/178 (47.75%), Postives = 106/178 (59.55%), Query Frame = 1
Query:    1 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKC-ADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFA---GGKSVPFTAA---SLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXF 513
            TIA RV+ +A   A G K+LG   V    FFDT+  +  A   A+  AA    +NLR V    V  S DETTT  D+  L  VFA   G K VP   A   ++A     ++P  L R S YLTH VFN++H+E E+LRY+  L  K+L+L  SMIPLGSCTMKLNAT+ M+PVTWP F
Sbjct:  372 TIALRVNRIAALLAEGAKQLGYTLVNET-FFDTLTFETGARTQALHDAALAKRINLRRVSDTQVGLSVDETTTRRDLADLLEVFAQAAGAKIVPQVDALDSTIAASDTASVPPALERTSAYLTHHVFNRHHSETEMLRYLRSLSDKDLALDRSMIPLGSCTMKLNATSEMLPVTWPEF 548          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP1_COLP3 (Glycine dehydrogenase [decarboxylating] 1 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=gcvP1 PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.805e-31
Identity = 77/175 (44.00%), Postives = 101/175 (57.71%), Query Frame = 1
Query:    1 TIAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG---GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            TIA R+H LA    LG    G   V    +FDT+     +   I + A     N R      ++ + DETTT E+V +LF +  G   G +V      +     ++IP+ L RES  LTHPVFN YH+E E+LRYI  L++K+L+L HSMI LGSCTMKLNAT  M+PV+WP FA
Sbjct:  363 TIANRIHRLADILCLGTATKGLTAVHA-NYFDTLTFNVDNKDEIVARALAANANFRTDVDGQISIALDETTTRENVAQLFDILLGEGHGLNVSDLDDQIVASGHSSIPASLVRESAILTHPVFNSYHSETEMLRYIKRLENKDLALNHSMISLGSCTMKLNATAQMIPVSWPEFA 536          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_GLUOX (Glycine dehydrogenase [decarboxylating] OS=Gluconobacter oxydans GN=gcvP PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.969e-31
Identity = 79/173 (45.66%), Postives = 106/173 (61.27%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLG-TVEVQGLPFFDTVKVKC-ADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA R H +A   + GLK LG TVE     FFDT+ V+  A A  + + A    +NLR      +  S DETTT E +  ++  FAG +    +A   A +V  A+P GL+R +P LTHPVF+ + +E +LLRY+  L  K+L+L  +MIPLGSCTMKLNAT  M+P+TWP FA
Sbjct:  363 IAARTHRMAAILSAGLKTLGATVETD--VFFDTITVQAGASAPQVLARAVASGINLRDAGDGRIGMSCDETTTPETIRAVWAAFAG-EGADLSAIEQALDVADALPEGLSRTAPLLTHPVFHAHRSETDLLRYMRALADKDLALDRTMIPLGSCTMKLNATAEMIPITWPEFA 532          

HSP 2 Score: 70.8626 bits (172), Expect = 8.749e-12
Identity = 44/100 (44.00%), Postives = 59/100 (59.00%), Query Frame = 3
Query:  480 KLNDASDMAXLCY-----IHPFAPADQAQXYXEMFTIWVSGCVPLLGLDS-SLAPNACAXGEYAGLMXIRAYHKAR-ETSRXVALYRVS-HGTXCSAAML 755
            KLN  ++M  + +     IHPFAPADQ Q Y E+F         + G D+ SL PN+ A GEYAGL+ IR YH+AR + +R V L   S HGT  ++A +
Sbjct:  516 KLNATAEMIPITWPEFARIHPFAPADQVQGYTELFAYLERTLCAISGYDAVSLQPNSGAQGEYAGLLAIRGYHRARGDENRDVCLIPASAHGTNPASAQM 615          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_ENTS8 (Glycine dehydrogenase [decarboxylating] OS=Enterobacter sakazakii (strain ATCC BAA-894) GN=gcvP PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.969e-31
Identity = 76/174 (43.68%), Postives = 107/174 (61.49%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAGGKSVPFTAASLAEEV---ETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA R+H  A   A GL+  G ++++   +FDT+ V+ AD   + + A   E+NLR      V  + DETTT  DV  L  V  G +   F   +L +EV     +IP+ + R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA   M+P+TWP FA
Sbjct:  360 IASRIHRFADILAAGLQHKG-LKLRHATWFDTLCVEVADKATVLARAEASEINLRSDIPGAVGITLDETTTRADVQALLRVVTG-EDATFDIDALDKEVAHDSRSIPAAMLRDDAILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFA 531          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_ECOL6 (Glycine dehydrogenase [decarboxylating] OS=Escherichia coli O6 GN=gcvP PE=3 SV=3)

HSP 1 Score: 134.806 bits (338), Expect = 4.969e-31
Identity = 75/174 (43.10%), Postives = 109/174 (62.64%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG---GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA R+H L    A GL++ G ++++   +FDT+ V+ AD   + + A   E+NLR    N V  + DETTT E+V +LF V  G   G  +      +A +   +I + + R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA   M+P+TWP FA
Sbjct:  360 IANRIHRLTDILAAGLQQKG-LKLRHAHYFDTLCVEVADKAGVLARAEAAEINLRSDILNAVGITLDETTTRENVMQLFSVLLGDNHGLDIDTLDKDVAHD-SRSIQAAMLRDDEILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFA 531          
BLAST of EY753823 vs. ExPASy Swiss-Prot
Match: GCSP_ECO81 (Glycine dehydrogenase [decarboxylating] OS=Escherichia coli O81 (strain ED1a) GN=gcvP PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 4.969e-31
Identity = 75/174 (43.10%), Postives = 109/174 (62.64%), Query Frame = 1
Query:    4 IAQRVHGLAGTFALGLKKLGTVEVQGLPFFDTVKVKCADAHAIASAAYKIEMNLRVVDSNTVTASFDETTTLEDVDKLFIVFAG---GKSVPFTAASLAEEVETAIPSGLTRESPYLTHPVFNKYHTEHELLRYIHLLQSKELSLCHSMIPLGSCTMKLNATN*MMPVTWPXFA 516
            IA R+H L    A GL++ G ++++   +FDT+ V+ AD   + + A   E+NLR    N V  + DETTT E+V +LF V  G   G  +      +A +   +I + + R+   LTHPVFN+YH+E E++RY+H L+ K+L+L  +MIPLGSCTMKLNA   M+P+TWP FA
Sbjct:  360 IANRIHRLTDILAAGLQQKG-LKLRHAHYFDTLCVEVADKAGVLARAEAAEINLRSDILNAVGITLDETTTRENVMQLFSVLLGDNHGLDIDTLDKDVAHD-SRSIQAAMLRDDEILTHPVFNRYHSETEMMRYMHSLERKDLALNQAMIPLGSCTMKLNAAAEMIPITWPEFA 531          
The following BLAST results are available for this feature:
BLAST of EY753823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 252
Match NameE-valueIdentityDescription
GCSP2_PSEF52.913e-3144.77Glycine dehydrogenase [decarboxylating] 2 OS=Pseud... [more]
GCSP_YERE83.805e-3141.38Glycine dehydrogenase [decarboxylating] OS=Yersini... [more]
GCSP_SHESM3.805e-3144.00Glycine dehydrogenase [decarboxylating] OS=Shewane... [more]
GCSP_ECOSM3.805e-3143.68Glycine dehydrogenase [decarboxylating] OS=Escheri... [more]
GCSP_BURXL3.805e-3147.75Glycine dehydrogenase [decarboxylating] OS=Burkhol... [more]
GCSP1_COLP33.805e-3144.00Glycine dehydrogenase [decarboxylating] 1 OS=Colwe... [more]
GCSP_GLUOX4.969e-3145.66Glycine dehydrogenase [decarboxylating] OS=Glucono... [more]
GCSP_ENTS84.969e-3143.68Glycine dehydrogenase [decarboxylating] OS=Enterob... [more]
GCSP_ECOL64.969e-3143.10Glycine dehydrogenase [decarboxylating] OS=Escheri... [more]
GCSP_ECO814.969e-3143.10Glycine dehydrogenase [decarboxylating] OS=Escheri... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-007-C11-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753823 ID=EY753823; Name=EY753823; organism=Citrus sinensis; type=EST; length=759bp
ACCATTGCTCAAAGAGTCCATGGACTAGCCGGGACTTTCGCCCTTGGGTT
AAAAAAGCTGGGGACAGTGGAAGTCCAGGGGCTTCCCTTCTTTGACACTG
TGAAGGTGAAGTGTGCGGATGCACATGCCATTGCCAGTGCTGCTTACAAG
ATTGAAATGAATCTTCGGGTTGTAGATTCCAACACCGTCACTGCTTCCTT
TGATGAAACAACCACCTTGGAGGATGTTGATAAGCTTTTCATAGTTTTCG
CTGGGGGCAAATCAGTTCCATTCACTGCTGCATCTCTGGCTGAAGAGGTT
GAGACTGCAATTCCGTCTGGATTAACAAGGGAGAGTCCGTATCTGACACA
TCCTGTTTTTAACAAATACCACACAGAGCATGAATTGCTTAGATACATTC
ATCTGTTACAATCAAAGGAGCTCTCACTATGCCATAGTATGATTCCATTG
GGATCTTGTACAATGAAATTGAATGCAACAAACTGAATGATGCCAGTGAC
ATGGCCTANCTTTGCTACATACACCCTTTTGCCCCTGCTGACCAGGCTCA
GGNTTATCANGAAATGTTTACAATCTGGGTGAGTGGCTGTGTACCATTAC
TGGGGCTTGACTCTTCTCTTGCACCAAATGCNTGTGCANCTGGTGAGTAT
GCTGGGCTCATGGNTATCCGCGCTTATCATAAGGCAAGAGAGACATCACG
GNATGTGGCATTATACCGTGTCAGCCATGGAACATNCTGCTCTGCTGCCA
TGTTGGATG
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