EY753821

Overview
NameEY753821
Unique NameEY753821
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13130 contig Csv1_Contig13130:1..892. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753821 vs. ExPASy Swiss-Prot
Match: CATV_NPVAP (Viral cathepsin OS=Antheraea pernyi nuclear polyhedrosis virus GN=VCATH PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.324e-11
Identity = 52/157 (33.12%), Postives = 70/157 (44.59%), Query Frame = 1
Query:  337 FARFARRYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYRLGLNKFADWSWEEFQRHRLGAA-----QN-CSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFWKGYLFVRTAACRLCPSFHNQGCXGGL 789
            F  F  ++ K Y S  E   RF  F  NL+ I + N    S +  +NKF+D S +E      G +     QN C            D  P   DWR    V+ VK+QG CG+CW F+T GSLE+ +  A     L   +    +   F + GC GGL
Sbjct:   28 FEEFLHKFNKNYSSESEKLRRFKIFQHNLEEIINKNQNDTSAQYEINKFSDLSKDETISKYTGLSLPLQKQNFCEVVVLDR---PPDKGPLEFDWRRLNKVTSVKNQGMCGACWAFATLGSLESQF--AIKHDQLINLSEQQLIDCDFVDVGCDGGL 179          
BLAST of EY753821 vs. ExPASy Swiss-Prot
Match: CATS_RAT (Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 5.647e-11
Identity = 53/151 (35.10%), Postives = 72/151 (47.68%), Query Frame = 1
Query:  385 EMKLRFATFSKNLDLIRSTNCK---GL-SYRLGLNKFADWSWEEFQRH----RLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFWKGYLFVRTAA-----CRLCPSFHNQGCXGGLPSQ 798
            E  +R   + KNL  I   N +   G+ SY +G+N   D + EE   +    R+    N S T K +   T   LP++ DWRE G V+ VK QG CGSCW FS  G+LE    Q   K    V  +A     C     + N+GC GG  ++
Sbjct:   42 EEDVRRLIWEKNLKFIMLHNLEHSMGMHSYSVGMNHMGDMTPEEVIGYMGSLRIPRPWNRSGTLKSSSNQT---LPDSVDWREKGCVTNVKYQGSCGSCWAFSAEGALEG---QLKLKTGKLVSLSAQNLVDCSTEEKYGNKGCGGGFMTE 186          
BLAST of EY753821 vs. ExPASy Swiss-Prot
Match: TEST2_MOUSE (Testin-2 OS=Mus musculus PE=2 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 9.576e-11
Identity = 40/115 (34.78%), Postives = 58/115 (50.43%), Query Frame = 1
Query:  355 RYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLS----YRLGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLE 687
            ++GK Y +V E +LR A + KN  +I   N + L     + + +N F D +  EF +   G  +                +P+  DWR  G V+PVK+QG+C S W FS TGSLE
Sbjct:   35 KHGKAY-NVNEERLRRAVWEKNFKMIELHNWEYLEGKHDFTMTMNAFGDLTNTEFVKMMTGFRRQKIKRMHVFQDHQFLYVPKYVDWRMLGYVTPVKNQGYCASSWAFSATGSLE 148          

HSP 2 Score: 24.6386 bits (52), Expect = 9.576e-11
Identity = 11/26 (42.31%), Postives = 15/26 (57.69%), Query Frame = 2
Query:  710 GKGISLSEQQLVDCAQAFTTRDAMVG 787
            G+ + LSEQ L+DC  +  T D   G
Sbjct:  156 GRLVPLSEQNLLDCMGSNVTHDCSGG 181          
BLAST of EY753821 vs. ExPASy Swiss-Prot
Match: TEST2_RAT (Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 9.632e-11
Identity = 51/151 (33.77%), Postives = 70/151 (46.36%), Query Frame = 1
Query:  355 RYGKIYESVEEMKLRFATFSKNLDLIRSTNCKGLSYR----LGLNKFADWSWEEFQRHRLGAAQNCSATTKGNHKLTADVLPETKDWRESGIVSPVKDQGHCGSCWTFSTTGSLEAAYHQAFWKGYLFVRTAACRLCP---SFHNQGCXGG 786
            ++GK Y   EE +L+ A + KN  +I   N + L  R    + +N F D +  EF +   G  +     T          +P+  DWR+ G V+PVK+QGHC S W FS TGSLE    Q F K    +  +   L     S    GC GG
Sbjct:   35 KHGKTYNMNEE-RLKRAVWEKNFKMIELHNWEYLEGRHDFTMAMNAFGDLTNIEFVKMMTGFQRQKIKKTHIFQDHQFLYVPKRVDWRQLGYVTPVKNQGHCASSWAFSATGSLEG---QMFRKTERLIPLSEQNLLDCMGSNVTHGCSGG 181          
The following BLAST results are available for this feature:
BLAST of EY753821 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 104
Match NameE-valueIdentityDescription
CATV_NPVAP4.324e-1133.12Viral cathepsin OS=Antheraea pernyi nuclear polyhe... [more]
CATS_RAT5.647e-1135.10Cathepsin S OS=Rattus norvegicus GN=Ctss PE=2 SV=1[more]
TEST2_MOUSE9.576e-1134.78Testin-2 OS=Mus musculus PE=2 SV=1[more]
TEST2_RAT9.632e-1133.77Testin-2 OS=Rattus norvegicus GN=Testin PE=1 SV=2[more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-007-C09-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753821 ID=EY753821; Name=EY753821; organism=Citrus sinensis; type=EST; length=893bp
AATTTTATATATTTGAGATGAATTATGTAAGTTACATTGAAGATAACTTA
GCACTTGCCGAATAATAATAGTGTTCATAGACTGCATTCATTTAATCCGA
AGCCCTTGAGTGCAGTGTGCTCTCTCCAAACAAAGCAGACACAATCATTA
GGCATGGCTCGCCCCGTACAGTTGGTCTCGTCCGTCATCTTGTTGCTTTG
CTGCGCTGCCGCAGCATCAGCATCAGCATCAAGCTTCGACGACTCCAATC
CGATCAGATTGGTATCATCGGACGGTCTCCGTGACTTCGAGACCTCCGTC
CTCCAGGTGATCGGCCAAGCCCGCCATGCTCTCTCCTTTGCCCGTTTTGC
TCGCAGGTATGGGAAGATTTACGAGTCCGTTGAGGAGATGAAGCTCCGGT
TCGCGACTTTCTCCAAGAACTTGGATTTAATCAGATCTACCAATTGTAAA
GGCCTATCTTACAGGCTCGGGTTGAACAAGTTTGCTGACTGGAGCTGGGA
AGAGTTCCAAAGGCACAGGTTGGGAGCTGCGCAAAACTGCTCTGCCACTA
CAAAAGGAAATCACAAGCTTACTGCTGATGTGCTTCCAGAAACGAAAGAC
TGGAGGGAATCTGGCATAGTAAGCCCAGTTAAAGACCAAGGTCACTGTGG
ATCTTGCTGGACTTTCAGCACGACTGGATCTCTTGAGGCTGCTTACCACC
AGGCCTTTTGGAAAGGGTATCTCTTTGTCAGAACAGCAGCTTGTAGACTG
TGCCCAAGCTTTCACAACCAGGGATGCNATGGTGGGTTGCCATCCCAGCC
TTTGATACATCAAGTACAAGGTGGCCTTGTACTGAGGAGCATATCCTCAC
CGAAAAAATGTGTCTGCAATCTCATCTGAAATTTGCGGNCAAG
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