EY753774

Overview
NameEY753774
Unique NameEY753774
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length904
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753774 vs. ExPASy Swiss-Prot
Match: UB2V2_RAT (Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattus norvegicus GN=Ube2v2 PE=1 SV=3)

HSP 1 Score: 158.688 bits (400), Expect = 4.241e-38
Identity = 71/136 (52.21%), Postives = 97/136 (71.32%), Query Frame = 1
Query:   22 SSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTMEDILTQLKKEMMSPQNWKLAQPPEG 429
            + V VPRNFR       G+KG+GDGTVS+G++D +D+ +  WTG IIGPP T +E RIY LK+ CG+ YP+ PPSVRF T+INM  +N  +GMV+    P+LA WQ  Y+++ +L +L++ MMS +N KL QPPEG
Sbjct:    5 TGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGSKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEG 140          
BLAST of EY753774 vs. ExPASy Swiss-Prot
Match: UB2V2_PONAB (Ubiquitin-conjugating enzyme E2 variant 2 OS=Pongo abelii GN=UBE2V2 PE=2 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 7.234e-38
Identity = 71/136 (52.21%), Postives = 96/136 (70.59%), Query Frame = 1
Query:   22 SSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTMEDILTQLKKEMMSPQNWKLAQPPEG 429
            + V VPRNFR       G+KG+GDGTVS+G++D +D+ +  WTG IIGPP T +E RIY LK+ CG  YP+ PPSVRF T+INM  +N  +GMV+    P+LA WQ  Y+++ +L +L++ MMS +N KL QPPEG
Sbjct:    5 TGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEG 140          
BLAST of EY753774 vs. ExPASy Swiss-Prot
Match: UB2V2_HUMAN (Ubiquitin-conjugating enzyme E2 variant 2 OS=Homo sapiens GN=UBE2V2 PE=1 SV=4)

HSP 1 Score: 157.918 bits (398), Expect = 7.234e-38
Identity = 71/136 (52.21%), Postives = 96/136 (70.59%), Query Frame = 1
Query:   22 SSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTMEDILTQLKKEMMSPQNWKLAQPPEG 429
            + V VPRNFR       G+KG+GDGTVS+G++D +D+ +  WTG IIGPP T +E RIY LK+ CG  YP+ PPSVRF T+INM  +N  +GMV+    P+LA WQ  Y+++ +L +L++ MMS +N KL QPPEG
Sbjct:    5 TGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEG 140          
BLAST of EY753774 vs. ExPASy Swiss-Prot
Match: UB2V2_BOVIN (Ubiquitin-conjugating enzyme E2 variant 2 OS=Bos taurus GN=UBE2V2 PE=2 SV=3)

HSP 1 Score: 157.918 bits (398), Expect = 7.234e-38
Identity = 71/136 (52.21%), Postives = 96/136 (70.59%), Query Frame = 1
Query:   22 SSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTMEDILTQLKKEMMSPQNWKLAQPPEG 429
            + V VPRNFR       G+KG+GDGTVS+G++D +D+ +  WTG IIGPP T +E RIY LK+ CG  YP+ PPSVRF T+INM  +N  +GMV+    P+LA WQ  Y+++ +L +L++ MMS +N KL QPPEG
Sbjct:    5 TGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLKVECGPKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEG 140          
BLAST of EY753774 vs. ExPASy Swiss-Prot
Match: UB2V1_PONAB (Ubiquitin-conjugating enzyme E2 variant 1 OS=Pongo abelii GN=UBE2V1 PE=2 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 1.234e-37
Identity = 71/137 (51.82%), Postives = 95/137 (69.34%), Query Frame = 1
Query:   19 GSSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTMEDILTQLKKEMMSPQNWKLAQPPEG 429
            GS V VPRNFR       G+KG+GDGTVS+G++D +D+ +  WTG IIGPP T++E RIY LK+ CG   P+ PP VRF T+INM  VN   G+V+P    +LA WQ  Y+++ +L +L++ MMS +N KL QPPEG
Sbjct:    6 GSGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKCPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEG 142          
BLAST of EY753774 vs. ExPASy Swiss-Prot
Match: UB2V1_CHICK (Ubiquitin-conjugating enzyme E2 variant 1 OS=Gallus gallus GN=UBE2V1 PE=2 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 3.590e-37
Identity = 69/136 (50.74%), Postives = 95/136 (69.85%), Query Frame = 1
Query:   22 SSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTMEDILTQLKKEMMSPQNWKLAQPPEG 429
            + V VPRNFR       G+KG+GDGTVS+G++D +D+ +  WTG IIGPP T++E RIY LK+ CG  YP+ PP VRF T+INM  VN   G+V+P    +LA WQ  ++++ +L +L++ MMS +N KL QPPEG
Sbjct:    5 TGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSFSIKVVLQELRRLMMSKENMKLPQPPEG 140          
BLAST of EY753774 vs. ExPASy Swiss-Prot
Match: UB2V2_DANRE (Ubiquitin-conjugating enzyme E2 variant 2 OS=Danio rerio GN=ube2v2 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.969e-36
Identity = 69/136 (50.74%), Postives = 94/136 (69.12%), Query Frame = 1
Query:   22 SSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTMEDILTQLKKEMMSPQNWKLAQPPEG 429
            S V VPRNFR       G+KG+GDGTVS+G++D +D+ +  WTG IIGP  T +E RIY LK+ CG  YP+ PP+VRF T+I+M  +N   GMV+    P+LA WQ  Y+++ +L +L++ MMS +N KL QPPEG
Sbjct:    5 SGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPARTNYENRIYSLKVECGPKYPEVPPTVRFVTKISMNGINNSNGMVDARSIPILAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEG 140          
BLAST of EY753774 vs. ExPASy Swiss-Prot
Match: MMS2_SCHPO (Ubiquitin-conjugating enzyme spm2 OS=Schizosaccharomyces pombe GN=spm2 PE=1 SV=1)

HSP 1 Score: 150.214 bits (378), Expect = 1.508e-35
Identity = 69/133 (51.88%), Postives = 90/133 (67.67%), Query Frame = 1
Query:   34 VPRNFRXXXXXXRGEKGIGDGTVSYGMDDADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTMEDILTQLKKEMMSPQNWKLAQPPEGN 432
            VPRNF+      +GEKG+G+ + SYG+ +ADDI +  W  TI+GP ++VHE RIY LK+ C  +YPD PP V F +RIN+  V+ ETG V P     L +W+REY+ME +L  LKKEM S  N KL QPPEG+
Sbjct:    4 VPRNFKLLEELEKGEKGLGESSCSYGLTNADDITLSDWNATILGPAHSVHENRIYSLKIHCDANYPDAPPIVTFVSRINLPGVDGETGKVNPHKIDCLRHWKREYSMETVLLDLKKEMASSSNRKLPQPPEGS 136          
BLAST of EY753774 vs. ExPASy Swiss-Prot
Match: UB2V2_XENLA (Ubiquitin-conjugating enzyme E2 variant 2 OS=Xenopus laevis GN=ube2v2 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.970e-35
Identity = 66/136 (48.53%), Postives = 94/136 (69.12%), Query Frame = 1
Query:   22 SSVVVPRNFRXXXXXXRGEKGIGDGTVSYGMDDADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTMEDILTQLKKEMMSPQNWKLAQPPEG 429
            + + VPRNFR       G+KG+GDGTVS+G++D +D+ +  WTG IIGPP T +E RIY L+L CG  YP+ PP+VRF T++NM  +N   G V+    P+LA WQ  ++++ +L +L++ MMS +N KL QPPEG
Sbjct:    5 AGIKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYENRIYSLRLECGPKYPEAPPTVRFVTKMNMNGINNSNGTVDYRSIPVLAKWQNSFSIKVLLQELRRLMMSKENMKLPQPPEG 140          
BLAST of EY753774 vs. ExPASy Swiss-Prot
Match: MMS2_YEAST (Ubiquitin-conjugating enzyme variant MMS2 OS=Saccharomyces cerevisiae GN=MMS2 PE=1 SV=1)

HSP 1 Score: 148.673 bits (374), Expect = 4.389e-35
Identity = 70/132 (53.03%), Postives = 89/132 (67.42%), Query Frame = 1
Query:   34 VPRNFRXXXXXXRGEKGIGDGTVSYGMDDADDILMQSWTGTIIGPPNTVHEGRIYQLKLFCGTDYPDNPPSVRFQTRINMTCVNQETGMVEPSLFPMLANWQREYTMEDILTQLKKEMMSPQNWKLAQPPEG 429
            VPRNFR      +GEKG G  + SYG+ D+DDI M  W GTI+GPP++ HE RIY L + CG +YPD+PP V F ++IN+ CVN  TG V+   F  L +W+R YTME +L  L+KEM +P N KL QP EG
Sbjct:    4 VPRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKINLPCVNPTTGEVQTD-FHTLRDWKRAYTMETLLLDLRKEMATPANKKLRQPKEG 134          
The following BLAST results are available for this feature:
BLAST of EY753774 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
UB2V2_RAT4.241e-3852.21Ubiquitin-conjugating enzyme E2 variant 2 OS=Rattu... [more]
UB2V2_PONAB7.234e-3852.21Ubiquitin-conjugating enzyme E2 variant 2 OS=Pongo... [more]
UB2V2_HUMAN7.234e-3852.21Ubiquitin-conjugating enzyme E2 variant 2 OS=Homo ... [more]
UB2V2_BOVIN7.234e-3852.21Ubiquitin-conjugating enzyme E2 variant 2 OS=Bos t... [more]
UB2V1_PONAB1.234e-3751.82Ubiquitin-conjugating enzyme E2 variant 1 OS=Pongo... [more]
UB2V1_CHICK3.590e-3750.74Ubiquitin-conjugating enzyme E2 variant 1 OS=Gallu... [more]
UB2V2_DANRE3.969e-3650.74Ubiquitin-conjugating enzyme E2 variant 2 OS=Danio... [more]
MMS2_SCHPO1.508e-3551.88Ubiquitin-conjugating enzyme spm2 OS=Schizosacchar... [more]
UB2V2_XENLA1.970e-3548.53Ubiquitin-conjugating enzyme E2 variant 2 OS=Xenop... [more]
MMS2_YEAST4.389e-3553.03Ubiquitin-conjugating enzyme variant MMS2 OS=Sacch... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-006-G04-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753774 ID=EY753774; Name=EY753774; organism=Citrus sinensis; type=EST; length=904bp
CCACGCGTCCGCTCTGAAGGATCATCAGTCGTCGTGCCTAGGAATTTCAG
ATTATTGGAAGAGCTTGAGAGGGGGGAAAAGGGAATTGGTGATGGAACTG
TCAGCTATGGAATGGATGATGCTGATGACATATTAATGCAATCATGGACT
GGGACAATTATAGGTCCCCCTAATACTGTTCATGAAGGACGTATCTACCA
GTTGAAACTTTTCTGTGGCACGGATTATCCGGACAATCCACCAAGTGTAA
GGTTTCAGACCCGGATAAACATGACCTGTGTCAATCAGGAGACAGGAATG
GTCGAACCAAGTCTTTTCCCTATGCTTGCCAATTGGCAAAGGGAGTATAC
AATGGAGGACATATTGACTCAACTGAAGAAAGAAATGATGTCTCCACAAA
ACTGGAAGCTTGCTCAACCTCCTGAAGGTAATGAAGATGCAAGGATGGAT
CACAAGGGGTTGGTGCTGAAGTGTTGTATCCTCTAAGCCAACTGAGATAT
GTACGAACATGGTAATGTATGTATATAATTATATGAATTAGATTATTCCA
ACCGCTGCTGGTTTAGTTCCCATGAAATATATATTCATGTCTGAGAAAGT
TGTCTTTACTTCCATCAAATGGTGGCTAAATAAAAATGTACCCTCTGTGA
ATCAACGATGTGCCCAAAATCTTGTGANTTTGTGTGCCTGAATCATACTT
GTGCGTGGAGTAACATGACTTTTGACTTTTGTCTCCAAACATTTGAGAAT
GTACCCAGCTGCGTGTCCTGATGGATNTTTATCTCTCCTCTTGNTNCTTG
ATCTTGCGATTTAGATGTATATTAGAAGTTAAATGAATGATGACAGGCGG
GTGCTGGTGAACTANTTTNAACTTGTAGCACCCATTATTCTCTTCATTAA
TTTT
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