EY753764

Overview
NameEY753764
Unique NameEY753764
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length926
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753764 vs. ExPASy Swiss-Prot
Match: Y2305_STAAM (Putative 2-hydroxyacid dehydrogenase SAV2305 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=SAV2305 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.781e-14
Identity = 57/190 (30.00%), Postives = 82/190 (43.16%), Query Frame = 1
Query:  304 KAFSNMAVGYNNVDVNAANKYGIAVGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKPMVNN---LSLGKEPRPWMRVLEKQM**VFIQSWIKHLPFDQQRKLATMKKGAXLVTAXRGP 864
            K  +N   G+NN+D+  A +  I V NTP                   RRIVE D+  R   +DGW P  F G  + G+T+G+IG G IGSA AR     F M+++Y    +    E+ + A    L  ++ N   +++     P M                 HL   +Q K+  MK    L+ A RGP
Sbjct:   68 KIIANYGAGFNNIDIEYAREKSIDVTNTPKASTNATADLTIGLVLAVARRIVEGDQLSRTTGFDGWAPLFFRGREVSGKTIGIIGLGEIGSAVAR-RARAFDMDVLYTGPNRKEEKEREIGAKYVDLDTLLKNADFITINAAYNPKMH----------------HLIDTEQFKM--MKSTVYLINASRGP 238          
BLAST of EY753764 vs. ExPASy Swiss-Prot
Match: Y2098_STAAN (Putative 2-hydroxyacid dehydrogenase SA2098 OS=Staphylococcus aureus (strain N315) GN=SA2098 PE=1 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 9.781e-14
Identity = 57/190 (30.00%), Postives = 82/190 (43.16%), Query Frame = 1
Query:  304 KAFSNMAVGYNNVDVNAANKYGIAVGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKPMVNN---LSLGKEPRPWMRVLEKQM**VFIQSWIKHLPFDQQRKLATMKKGAXLVTAXRGP 864
            K  +N   G+NN+D+  A +  I V NTP                   RRIVE D+  R   +DGW P  F G  + G+T+G+IG G IGSA AR     F M+++Y    +    E+ + A    L  ++ N   +++     P M                 HL   +Q K+  MK    L+ A RGP
Sbjct:   68 KIIANYGAGFNNIDIEYAREKSIDVTNTPKASTNATADLTIGLVLAVARRIVEGDQLSRTTGFDGWAPLFFRGREVSGKTIGIIGLGEIGSAVAR-RARAFDMDVLYTGPNRKEEKEREIGAKYVDLDTLLKNADFITINAAYNPKMH----------------HLIDTEQFKM--MKSTVYLINASRGP 238          
BLAST of EY753764 vs. ExPASy Swiss-Prot
Match: Y1888_STAEQ (Putative 2-hydroxyacid dehydrogenase SERP1888 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=SERP1888 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.081e-12
Identity = 43/133 (32.33%), Postives = 62/133 (46.62%), Query Frame = 1
Query:  304 KAFSNMAVGYNNVDVNAANKYGIAVGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKPMVNN 702
            K  +N   G+NN+DV  A +  I V NTP                   RRIVE D   R   +DGW P  F G  + G+T+G+IG G IG A A+     F M+++Y   ++    E+ + A    L  ++ N
Sbjct:   68 KIIANYGAGFNNIDVEYARQQNIDVTNTPHASTNATADLTIGLILSVARRIVEGDHLSRTTGFDGWAPLFFRGREVSGKTIGIIGLGEIGGAVAK-RARAFDMDVLYTGPHRKEEKERDIGAKYVDLDTLLKN 199          
BLAST of EY753764 vs. ExPASy Swiss-Prot
Match: Y1879_STAES (Putative 2-hydroxyacid dehydrogenase SE_1879 OS=Staphylococcus epidermidis (strain ATCC 12228) GN=SE_1879 PE=3 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 1.081e-12
Identity = 43/133 (32.33%), Postives = 62/133 (46.62%), Query Frame = 1
Query:  304 KAFSNMAVGYNNVDVNAANKYGIAVGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKPMVNN 702
            K  +N   G+NN+DV  A +  I V NTP                   RRIVE D   R   +DGW P  F G  + G+T+G+IG G IG A A+     F M+++Y   ++    E+ + A    L  ++ N
Sbjct:   68 KIIANYGAGFNNIDVEYARQQNIDVTNTPHASTNATADLTIGLILSVARRIVEGDHLSRTTGFDGWAPLFFRGREVSGKTIGIIGLGEIGGAVAK-RARAFDMDVLYTGPHRKEEKERDIGAKYVDLDTLLKN 199          
BLAST of EY753764 vs. ExPASy Swiss-Prot
Match: DHGY_HYPME (Glycerate dehydrogenase OS=Hyphomicrobium methylovorum PE=1 SV=2)

HSP 1 Score: 68.9366 bits (167), Expect = 4.543e-11
Identity = 45/166 (27.11%), Postives = 79/166 (47.59%), Query Frame = 1
Query:  151 DCRVEICTQKKTILSVEDIIALIGDKC-DGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQAT 645
            D ++ I    +T  SV+ ++  + +KC   VI ++ E+              K  S  ++G++++D++A    GI VGN P                   RR  E ++ +R   + GW P   VG  L  +T+G+ G G IG A A+   +GF M++ Y+D ++A+
Sbjct:   32 DPKITIDEMIETAKSVDALLITLNEKCRKEVIDRIPENI-------------KCISTYSIGFDHIDLDACKARGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAK-RAQGFDMDIDYFDTHRAS 183          
The following BLAST results are available for this feature:
BLAST of EY753764 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
Y2305_STAAM9.781e-1430.00Putative 2-hydroxyacid dehydrogenase SAV2305 OS=St... [more]
Y2098_STAAN9.781e-1430.00Putative 2-hydroxyacid dehydrogenase SA2098 OS=Sta... [more]
Y1888_STAEQ1.081e-1232.33Putative 2-hydroxyacid dehydrogenase SERP1888 OS=S... [more]
Y1879_STAES1.081e-1232.33Putative 2-hydroxyacid dehydrogenase SE_1879 OS=St... [more]
DHGY_HYPME4.543e-1127.11Glycerate dehydrogenase OS=Hyphomicrobium methylov... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-006-F06-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753764 ID=EY753764; Name=EY753764; organism=Citrus sinensis; type=EST; length=926bp
CCACGCGTCCGCTTGGAACTTGAAACTGCCAACTTAGCTTCAATGGCGAA
GCCAGTTTCAATTGAAGTGTGGAACCCAAATGGAAAATATAGAGTTGTTA
GTACCAAGCCTATGCCTGGAACCCGCTGGATCAATCTCTTAATCGAACAA
GATTGCCGTGTTGAAATATGTACCCAGAAGAAAACTATACTCTCTGTTGA
AGATATCATTGCTTTGATTGGTGACAAGTGCGATGGAGTCATTGGACAGT
TGACAGAGGACTGGGGAGAGACTTTGTTTGCTGCACTGAGTAGAGCAGGA
GGAAAGGCTTTTAGTAACATGGCTGTTGGTTACAACAATGTTGACGTTAA
TGCTGCTAACAAATATGGTATTGCTGTTGGAAACACTCCTGGAGTACTTA
CTGAAACAACAGCAGAGTTAGCAGCTTCGCTCTCTCTAGCGGCTGCAAGA
AGAATTGTTGAAGCAGATGAGTTTATGAGAGCTGGCTTATACGATGGATG
GCTTCCAAATCTATTCGTCGGGAACTTGCTCAAGGGACAGACTGTCGGTG
TGATTGGAGCTGGTCGTATCGGATCTGCCTATGCTAGAATGATGGTTGAA
GGGTTCAAAATGAACCTCATTTACTATGATCTTTACCAAGCTACACGCTT
GGAAAAGTTTGTCACAGCTTATGGTCAGTTTCTAAAGCCAATGGTGAACA
ACCTGTCACTTGGAAAAGAGCCTCGTCCATGGATGAGGGTGCTCGAGAAG
CAGATGTGATAAGTCTTCATCCAGTCTTGGATAAAACACTTACCATTTGA
TCAACAAAGAAAGCTTGCAACGATGAAAAAAGGAGCGATNCTTGTCACTG
CCNNTAGGGGCCCGTGATTGATGAATANCTTTGGGGGAGCATTTGAACAA
AATCAATGGTNNNGGGTCGGCTTGAA
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