EY753760

Overview
NameEY753760
Unique NameEY753760
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length919
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY753760 vs. ExPASy Swiss-Prot
Match: PHSM_STRPN (Maltodextrin phosphorylase OS=Streptococcus pneumoniae GN=malP PE=3 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 2.733e-18
Identity = 65/211 (30.81%), Postives = 91/211 (43.13%), Query Frame = 1 
Query:   46 NLGLTGAYAEALSKLGQSLENVVSQEPDXXXXXXXXXXXXSCFLDSMATLNYPAWGYGLIYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAG---DHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASLQI 669
            NLGL     + L+  G+ L  V   E +            +CF+DS+ATL     G GL Y +GLF+Q +  + QE +   WL   N W + R+  SY V F                   + +  YDI + GY+T T   LRL+      +  D S    G   D T  A  LT        LYP D   +G++LR+ QQY + S   Q+
Sbjct:   67 NLGLYDDVKKELAAAGKDLIEVEEVELEPSLGNGGLGRLAACFIDSIATLGLNGDGVGLNYHFGLFQQVLKNNQQETIPNAWLTEQN-W-LVRSSRSYQVPF---------------ADFTLTSTLYDIDVTGYETATKNRLRLFDL----DSVDSSIIKDGINFDKTDIARNLT------LFLYPDDSDRQGELLRIFQQYFMVSNGAQL 250

HSP 2 Score: 35.4242 bits (80), Expect = 2.733e-18
Identity = 14/27 (51.85%), Postives = 20/27 (74.07%), Query Frame = 3 
Query:  708 NWEEIPEKVAVQMNDTHPTLCIPELIR 788
            N  ++ +   VQ+NDTHP++ IPELIR
Sbjct:  261 NLHDLADYAVVQINDTHPSMVIPELIR 287
The following BLAST results are available for this feature:
BLAST of EY753760 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 41
Match NameE-valueIdentityDescription
PHSM_STRPN2.733e-1830.81Maltodextrin phosphorylase OS=Streptococcus pneumo... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS12-C1-001-006-F01-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753760 ID=EY753760; Name=EY753760; organism=Citrus sinensis; type=EST; length=919bp
GTCNTGGTAACGCATGCCAGTACTTGGTCCGGNATTCCCGGGCCGAATTT
GGGGCTTACTGGTGCTTATGCAGAGGCTCTGAGCAAGCTTGGACAGAGTC
TTGAAAATGTGGTTTCTCAGGAACCGGATGCTGCACTTGGTAATGGGGGA
CTTGGGCGTCTTGCCTCCTGTTTTCTGGACTCTATGGCAACACTAAATTA
CCCAGCATGGGGTTATGGACTTATATACAAGTATGGGTTATTTAAACAGA
GGATTACAAAAGATGGTCAAGAGGAAGTTGCTGAAGATTGGCTTGAGTTG
GGAAATCCCTGGGAAATAGAGAGAAATGATGTTTCATACCCAGTAAAATT
TTATGGCAAAATTGTTCCTGGATCAGATGGGAAAAGTCACTGGATTGGAG
GAGAAGATATAAAAGCTGTTGCATATGATATCCCTATACCTGGGTATAAA
ACTAAAACCACAATCAACCTGCGACTTTGGTCTACTATGGTTCCTTCGGA
AGATTTTGATCTATCTGCTTTTAATGCTGGAGATCACACCAAAGCAGCTG
AAGCCCTAACCAATGCTGAAAAGATTTGCTATATACTATACCCTGGGGAT
GAATCAGTTGAGGGCAAGGTCCTACGTTTAAAACAACAATACACCCTATG
CTCTGCTTCTCTCCAAATATCATTGCACGTTTTGAGAAAAGATCTGGTGC
AAATGTAAACTGGGAAGAAATTCCTGAGAAAGTTGCTGTTCAAATGAATG
ATACTCACCCTACTCTTTGCATCCCTGAACTGATTAGATTTTGATAGATT
TGAAGGTTTAAGCTGGAAGGAGCCTGGAATATACACAGAAGACTGTGGAT
TCACAAACCAACTGTTTACCAAAGCCTTGGAGAAAGGAGTTTTGTACTTA
TGCAAAATGCTACTCTGAC
back to top