EY753759
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY753759 vs. ExPASy Swiss-Prot
Match: RL16_NEUCR (60S ribosomal protein L16 OS=Neurospora crassa GN=rpl-16 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 5.859e-23 Identity = 42/79 (53.16%), Postives = 55/79 (69.62%), Query Frame = 2 Query: 311 GPFHFRAPAKIFWRSVRGLFPCTTLRVSASLARLWAFEGVLASYDPVLRLVIPVALVVSRLSPGPSFCLLCRLASVVWW 547 GPFHFRAP++IF+++VRG+ P T R +A+L RL FEGV YD ++V+P AL V RL PG FC + RL+S V W Sbjct: 71 GPFHFRAPSRIFYKAVRGMIPHKTARGAAALERLKVFEGVPPPYDKKKKMVVPQALRVLRLQPGRKFCTVGRLSSEVGW 149 HSP 2 Score: 42.743 bits (99), Expect = 5.859e-23 Identity = 23/47 (48.94%), Postives = 29/47 (61.70%), Query Frame = 1 Query: 124 VVVDALLHLLGRLASIAAIELLLFHXVVAVRCEYICLCGGLVRPNVK 264 VV+D HLLGRLASI A +LL +V VRCE + + G R +K Sbjct: 8 VVIDGKGHLLGRLASIVAKQLLNGQKIVVVRCEALNISGEFFRAKLK 54
BLAST of EY753759 vs. ExPASy Swiss-Prot
Match: R13A4_ARATH (60S ribosomal protein L13a-4 OS=Arabidopsis thaliana GN=RPL13AD PE=2 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 6.609e-23 Identity = 54/91 (59.34%), Postives = 64/91 (70.33%), Query Frame = 2 Query: 275 FLRMRMTTLPFHGPFHFRAPAKIFWRSVRGLFPCTTLRVSASLARLWAFEGVLASYDPVLRLVIPVALVVSRLSPGPSFCLLCRLASVVWW 547 FLR RM T P HGP HFRAP+KIFWR+VRG+ P T R +A+LARL +EGV YD + R+VIP AL V RL G +CLL RL+S V W Sbjct: 62 FLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPTPYDKIKRMVIPDALKVLRLQAGHKYCLLGRLSSEVGW 152 HSP 2 Score: 69.707 bits (169), Expect = 2.619e-11 Identity = 41/73 (56.16%), Postives = 45/73 (61.64%), Query Frame = 1 Query: 103 SGLCANPVVVDALLHLLGRLASIAAIELLLFHXVVAVRCEYICLCGGLVRPNVKCMRV--------PSHAHDH 297 SG+C+ VVVDA H+LGRLASI A ELL VV VRCE ICL GGLVR +K MR PSH H Sbjct: 5 SGICSKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYMRFLRKRMNTKPSHGPIH 77
BLAST of EY753759 vs. ExPASy Swiss-Prot
Match: RL13A_SPOFR (60S ribosomal protein L13a OS=Spodoptera frugiperda GN=RpL13A PE=2 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 7.624e-23 Identity = 43/91 (47.25%), Postives = 56/91 (61.54%), Query Frame = 2 Query: 275 FLRMRMTTLPFHGPFHFRAPAKIFWRSVRGLFPCTTLRVSASLARLWAFEGVLASYDPVLRLVIPVALVVSRLSPGPSFCLLCRLASVVWW 547 FLR R P GPFHFRAP+KI W++VRG+ P T R ++L RL A++G YD R+V+P AL V L PG +C + RL+ V W Sbjct: 59 FLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKSALRRLRAYDGCPPPYDNRRRVVVPAALRVFCLKPGRKYCHVGRLSHEVGW 149 HSP 2 Score: 43.5134 bits (101), Expect = 7.624e-23 Identity = 24/56 (42.86%), Postives = 32/56 (57.14%), Query Frame = 1 Query: 103 SGLCANPVVVDALLHLLGRLASIAAIELLLFHXVVAVRCEYICLCGGLVRPNVKCM 270 +G +V+D HLLGRLA++ A LL + VV VRCE I + G R +K M Sbjct: 2 TGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFM 57
BLAST of EY753759 vs. ExPASy Swiss-Prot
Match: RL13A_PIG (60S ribosomal protein L13a (Fragment) OS=Sus scrofa GN=RPL13A PE=2 SV=2) HSP 1 Score: 85.5001 bits (210), Expect = 1.316e-22 Identity = 44/85 (51.76%), Postives = 54/85 (63.53%), Query Frame = 2 Query: 275 FLRMRMTTLPFHGPFHFRAPAKIFWRSVRGLFPCTTLRVSASLARLWAFEGVLASYDPVLRLVIPVALVVSRLSPGPSFCLLCRL 529 FLR RM T P GP+HFRAP++IFWR+VRG+ P T R A+L RL F+G+ YD R+V+P AL V RL F L RL Sbjct: 53 FLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKLTGKFXYLGRL 137 HSP 2 Score: 42.3578 bits (98), Expect = 1.316e-22 Identity = 23/47 (48.94%), Postives = 30/47 (63.83%), Query Frame = 1 Query: 124 VVVDALLHLLGRLASIAAIELLLFHXVVAVRCEYICLCGGLVRPNVK 264 +V+D HLLGRLA+I A ++LL VV VRCE I + G R +K Sbjct: 3 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLK 49
BLAST of EY753759 vs. ExPASy Swiss-Prot
Match: R13A1_ARATH (60S ribosomal protein L13a-1 OS=Arabidopsis thaliana GN=RPL13AA PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.923e-22 Identity = 53/91 (58.24%), Postives = 63/91 (69.23%), Query Frame = 2 Query: 275 FLRMRMTTLPFHGPFHFRAPAKIFWRSVRGLFPCTTLRVSASLARLWAFEGVLASYDPVLRLVIPVALVVSRLSPGPSFCLLCRLASVVWW 547 FLR RM T P HGP HFRAP+KIFWR+VRG+ P T R + +LARL FEGV YD + R+V+P AL V RL G +CLL RL+S V W Sbjct: 62 FLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGANALARLKVFEGVPTPYDKIKRMVVPDALKVLRLQAGHKYCLLGRLSSEVGW 152 HSP 2 Score: 69.3218 bits (168), Expect = 3.420e-11 Identity = 39/73 (53.42%), Postives = 45/73 (61.64%), Query Frame = 1 Query: 103 SGLCANPVVVDALLHLLGRLASIAAIELLLFHXVVAVRCEYICLCGGLVRPNVKCMRV--------PSHAHDH 297 SG+CA VVVDA H+LGRLAS+ A +LL +V VRCE ICL GGLVR +K MR PSH H Sbjct: 5 SGICAKRVVVDARHHMLGRLASVVAKDLLNGQNIVVVRCEEICLSGGLVRQKMKYMRFLRKRMNTKPSHGPIH 77
BLAST of EY753759 vs. ExPASy Swiss-Prot
Match: RL13A_DROME (60S ribosomal protein L13a OS=Drosophila melanogaster GN=RpL13A PE=1 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 2.842e-22 Identity = 40/92 (43.48%), Postives = 59/92 (64.13%), Query Frame = 2 Query: 275 FLRMRMTTLPFHGPFHFRAPAKIFWRSVRGLFPCTTLRVSASLARLWAFEGVLASYDPVLRLVIPVALVVSRLSPGPSFCLLCRLASVVWWY 550 +LR R P GPFHFRAP++IF+++VRG+ P T R A+LARL F+G+ + YD R+V+P+A+ V L +C + RL+ V W+ Sbjct: 59 YLRKRCNVNPARGPFHFRAPSRIFYKAVRGMIPHKTKRGQAALARLRVFDGIPSPYDKRRRVVVPIAMRVLTLRSDRKYCQVGRLSHEVGWH 150 HSP 2 Score: 43.1282 bits (100), Expect = 2.842e-22 Identity = 25/54 (46.30%), Postives = 30/54 (55.56%), Query Frame = 1 Query: 103 SGLCANPVVVDALLHLLGRLASIAAIELLLFHXVVAVRCEYICLCGGLVRPNVK 264 +GL VV+D HLLGRLAS+ A LL V VRCE + L G R +K Sbjct: 2 TGLTNRTVVIDGRGHLLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFYRNKIK 55
BLAST of EY753759 vs. ExPASy Swiss-Prot
Match: RL13A_PICMA (60S ribosomal protein L13a OS=Picea mariana GN=RPL13A PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 5.595e-22 Identity = 54/100 (54.00%), Postives = 67/100 (67.00%), Query Frame = 2 Query: 275 FLRMRMTTLPFHGPFHFRAPAKIFWRSVRGLFPCTTLRVSASLARLWAFEGVLASYDPVLRLVIPVALVVSRLSPGPSFCLLCRLASVVWWYCSVSLWEL 574 FLR RM T P HGP HFRAP++I WR++RG+ P T R +A+LA L AFEGV YD R+VIP AL V RL PG +CLL RL+ V W+ ++ EL Sbjct: 62 FLRKRMNTKPSHGPIHFRAPSRILWRTIRGMIPHKTKRGAAALATLRAFEGVPPPYDRKKRMVIPDALKVLRLQPGHKYCLLGRLSKEVGWHHFDTITEL 161 HSP 2 Score: 69.3218 bits (168), Expect = 3.420e-11 Identity = 40/73 (54.79%), Postives = 45/73 (61.64%), Query Frame = 1 Query: 103 SGLCANPVVVDALLHLLGRLASIAAIELLLFHXVVAVRCEYICLCGGLVRPNVKCMRV--------PSHAHDH 297 SG+CA VVVDA H+LGRLASI A ELL VV VRCE IC+ GGLVR +K +R PSH H Sbjct: 5 SGICAKEVVVDARHHMLGRLASILAKELLHGQRVVVVRCEEICMSGGLVRQKMKYLRFLRKRMNTKPSHGPIH 77
BLAST of EY753759 vs. ExPASy Swiss-Prot
Match: RL13A_CHOPR (60S ribosomal protein L13a OS=Choristoneura parallela GN=RpL13A PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 6.263e-22 Identity = 42/91 (46.15%), Postives = 55/91 (60.44%), Query Frame = 2 Query: 275 FLRMRMTTLPFHGPFHFRAPAKIFWRSVRGLFPCTTLRVSASLARLWAFEGVLASYDPVLRLVIPVALVVSRLSPGPSFCLLCRLASVVWW 547 FLR R P GPFHFRAP+KI W++VRG+ P T R +L RL +++G YD R+V+P AL V L PG +C + RL+ V W Sbjct: 59 FLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKDALRRLRSYDGCPPPYDNRRRVVVPAALRVFCLKPGRKYCHVGRLSHEVGW 149 HSP 2 Score: 42.743 bits (99), Expect = 6.263e-22 Identity = 23/56 (41.07%), Postives = 32/56 (57.14%), Query Frame = 1 Query: 103 SGLCANPVVVDALLHLLGRLASIAAIELLLFHXVVAVRCEYICLCGGLVRPNVKCM 270 +G +V+D HLLGRLA++ A LL + VV VRCE + + G R +K M Sbjct: 2 TGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQLNISGNFFRNKLKFM 57
BLAST of EY753759 vs. ExPASy Swiss-Prot
Match: RL16B_SCHPO (60S ribosomal protein L16-B OS=Schizosaccharomyces pombe GN=rpl16b PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 2.337e-21 Identity = 41/91 (45.05%), Postives = 55/91 (60.44%), Query Frame = 2 Query: 275 FLRMRMTTLPFHGPFHFRAPAKIFWRSVRGLFPCTTLRVSASLARLWAFEGVLASYDPVLRLVIPVALVVSRLSPGPSFCLLCRLASVVWW 547 +LR P G FHFRAP++IF ++VRG+ P T R A+L L A EG+ +D R+V+P AL V RL PG +C + RL+S V W Sbjct: 58 YLRKACRYNPSRGAFHFRAPSRIFQKAVRGMLPHKTARGQAALEHLQAVEGIPPPFDKQKRVVVPAALRVLRLKPGRKYCTVGRLSSEVGW 148 HSP 2 Score: 43.5134 bits (101), Expect = 2.337e-21 Identity = 24/47 (51.06%), Postives = 30/47 (63.83%), Query Frame = 1 Query: 124 VVVDALLHLLGRLASIAAIELLLFHXVVAVRCEYICLCGGLVRPNVK 264 VV+DA HLLGRLAS+ A +LL VV VRCE + + G R +K Sbjct: 8 VVIDAKGHLLGRLASVVAKQLLGGQKVVVVRCEELNISGHFFRNKLK 54
BLAST of EY753759 vs. ExPASy Swiss-Prot
Match: RL16A_SCHPO (60S ribosomal protein L16-A OS=Schizosaccharomyces pombe GN=rpl16a PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 2.337e-21 Identity = 41/91 (45.05%), Postives = 55/91 (60.44%), Query Frame = 2 Query: 275 FLRMRMTTLPFHGPFHFRAPAKIFWRSVRGLFPCTTLRVSASLARLWAFEGVLASYDPVLRLVIPVALVVSRLSPGPSFCLLCRLASVVWW 547 +LR P G FHFRAP++IF ++VRG+ P T R A+L L A EG+ +D R+V+P AL V RL PG +C + RL+S V W Sbjct: 58 YLRKACRYNPSRGAFHFRAPSRIFQKAVRGMLPHKTARGQAALEHLQAVEGIPPPFDKQKRVVVPAALRVLRLKPGRKYCTVGRLSSEVGW 148 HSP 2 Score: 43.5134 bits (101), Expect = 2.337e-21 Identity = 24/47 (51.06%), Postives = 30/47 (63.83%), Query Frame = 1 Query: 124 VVVDALLHLLGRLASIAAIELLLFHXVVAVRCEYICLCGGLVRPNVK 264 VV+DA HLLGRLAS+ A +LL VV VRCE + + G R +K Sbjct: 8 VVIDAKGHLLGRLASVVAKQLLGGQKVVVVRCEELNISGHFFRNKLK 54 The following BLAST results are available for this feature:
BLAST of EY753759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
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Sequences
The
following sequences are available for this feature:
EST sequence >EY753759 ID=EY753759; Name=EY753759; organism=Citrus sinensis; type=EST; length=909bpback to top |