EY753759
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY753759 vs. ExPASy Swiss-Prot
Match: RL16C_SCHPO (60S ribosomal protein L16-C OS=Schizosaccharomyces pombe GN=rpl16c PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 2.493e-20 Identity = 40/91 (43.96%), Postives = 54/91 (59.34%), Query Frame = 2 Query: 275 FLRMRMTTLPFHGPFHFRAPAKIFWRSVRGLFPCTTLRVSASLARLWAFEGVLASYDPVLRLVIPVALVVSRLSPGPSFCLLCRLASVVWW 547 +LR P G FHFRAP++IF ++VRG+ P T R + +L L A EG+ +D RLV+P AL V RL P +C + RL+S V W Sbjct: 58 YLRKACRYNPSRGAFHFRAPSRIFTKAVRGMLPHKTTRGNIALKNLQALEGIPPPFDKQKRLVVPAALRVLRLKPSRKYCTIGRLSSEVGW 148 HSP 2 Score: 41.9726 bits (97), Expect = 2.493e-20 Identity = 22/47 (46.81%), Postives = 29/47 (61.70%), Query Frame = 1 Query: 124 VVVDALLHLLGRLASIAAIELLLFHXVVAVRCEYICLCGGLVRPNVK 264 V++DA HL+GRLAS A +LL VV VRCE + + G R +K Sbjct: 8 VIIDAKGHLMGRLASTVAKQLLAGQKVVVVRCEELNISGHFFRNKLK 54
BLAST of EY753759 vs. ExPASy Swiss-Prot
Match: RL13A_DICDI (60S ribosomal protein L13a OS=Dictyostelium discoideum GN=rpl13a PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 9.302e-20 Identity = 41/91 (45.05%), Postives = 55/91 (60.44%), Query Frame = 2 Query: 275 FLRMRMTTLPFHGPFHFRAPAKIFWRSVRGLFPCTTLRVSASLARLWAFEGVLASYDPVLRLVIPVALVVSRLSPGPSFCLLCRLASVVWW 547 FL + M T G H R+P+KIFWR+VRG+ P T R A+L + FEGV A YD V R+V+P AL V +L+ + +L RL+ V W Sbjct: 57 FLNLTMNTNHARGHRHGRSPSKIFWRAVRGMLPHKTPRGQAALDNMKVFEGVPAPYDKVKRVVVPSALRVVKLNTTRKYTVLSRLSQEVGW 147 HSP 2 Score: 42.3578 bits (98), Expect = 9.302e-20 Identity = 22/47 (46.81%), Postives = 29/47 (61.70%), Query Frame = 1 Query: 124 VVVDALLHLLGRLASIAAIELLLFHXVVAVRCEYICLCGGLVRPNVK 264 +V+D HLLGRLAS+ A LL +V VRCE + + G L R +K Sbjct: 7 IVIDGKGHLLGRLASVVAKSLLSGQKIVVVRCEELNISGPLSRNKLK 53
BLAST of EY753759 vs. ExPASy Swiss-Prot
Match: RL13A_CAEEL (60S ribosomal protein L13a OS=Caenorhabditis elegans GN=rpl-16 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 2.041e-19 Identity = 42/91 (46.15%), Postives = 51/91 (56.04%), Query Frame = 2 Query: 275 FLRMRMTTLPFHGPFHFRAPAKIFWRSVRGLFPCTTLRVSASLARLWAFEGVLASYDPVLRLVIPVALVVSRLSPGPSFCLLCRLASVVWW 547 FLR R P G FH+RAP KIFWR+VRG+ P T R + +L L A+EGV A Y L P A RL P FC++ RL+ V W Sbjct: 58 FLRKRCNINPARGAFHYRAPGKIFWRTVRGMLPHKTNRGNEALKNLRAYEGVPAKYQKTKSLHAPSASRF-RLQPRRKFCVVGRLSHEVGW 147 HSP 2 Score: 42.743 bits (99), Expect = 2.041e-19 Identity = 24/55 (43.64%), Postives = 31/55 (56.36%), Query Frame = 1 Query: 106 GLCANPVVVDALLHLLGRLASIAAIELLLFHXVVAVRCEYICLCGGLVRPNVKCM 270 GL +++D HLLGRLASI A +LL VV +R E I + G R +K M Sbjct: 2 GLSNRAIIIDGKNHLLGRLASIVAKKLLQGDKVVVLRAEEIVISGNFHRSKLKYM 56
BLAST of EY753759 vs. ExPASy Swiss-Prot
Match: RL16A_YEAST (60S ribosomal protein L16-A OS=Saccharomyces cerevisiae GN=RPL16A PE=1 SV=3) HSP 1 Score: 77.0258 bits (188), Expect = 1.285e-18 Identity = 40/91 (43.96%), Postives = 55/91 (60.44%), Query Frame = 2 Query: 275 FLRMRMTTLPFHGPFHFRAPAKIFWRSVRGLFPCTTLRVSASLARLWAFEGVLASYDPVLRLVIPVALVVSRLSPGPSFCLLCRLASVVWW 547 FLR GPFHFRAP++IF++++RG+ T R A+L RL FEG+ YD R+V+P AL V RL PG + L +L++ V W Sbjct: 57 FLRKATAFNKTRGPFHFRAPSRIFYKALRGMVSHKTARGKAALERLKVFEGIPPPYDKKKRVVVPQALRVLRLKPGRKYTTLGKLSTSVGW 147 HSP 2 Score: 37.3502 bits (85), Expect = 1.285e-18 Identity = 20/47 (42.55%), Postives = 28/47 (59.57%), Query Frame = 1 Query: 124 VVVDALLHLLGRLASIAAIELLLFHXVVAVRCEYICLCGGLVRPNVK 264 VV+D HL+GRLAS+ A +LL +V VR E + + G R +K Sbjct: 7 VVIDGKGHLVGRLASVVAKQLLNGQKIVVVRAEELNISGEFFRNKLK 53
BLAST of EY753759 vs. ExPASy Swiss-Prot
Match: RL16B_YEAST (60S ribosomal protein L16-B OS=Saccharomyces cerevisiae GN=RPL16B PE=1 SV=3) HSP 1 Score: 75.0998 bits (183), Expect = 6.217e-18 Identity = 39/91 (42.86%), Postives = 54/91 (59.34%), Query Frame = 2 Query: 275 FLRMRMTTLPFHGPFHFRAPAKIFWRSVRGLFPCTTLRVSASLARLWAFEGVLASYDPVLRLVIPVALVVSRLSPGPSFCLLCRLASVVWW 547 FLR GPFHFRAP++I ++++RG+ T R A+L RL FEG+ YD R+V+P AL V RL PG + L +L++ V W Sbjct: 56 FLRKATAFNKTRGPFHFRAPSRILYKAIRGMVSHKTARGKAALERLKIFEGIPPPYDKKKRVVVPQALRVLRLKPGRKYTTLGKLSTSVGW 146 HSP 2 Score: 36.965 bits (84), Expect = 6.217e-18 Identity = 21/47 (44.68%), Postives = 28/47 (59.57%), Query Frame = 1 Query: 124 VVVDALLHLLGRLASIAAIELLLFHXVVAVRCEYICLCGGLVRPNVK 264 VV+DA HLLGRLAS A ++L +V VR E + + G R +K Sbjct: 6 VVIDAKDHLLGRLASTIAKQVLNGQKIVVVRAEALNISGEFFRNKLK 52
BLAST of EY753759 vs. ExPASy Swiss-Prot
Match: RL13A_LUPLU (60S ribosomal protein L13a OS=Lupinus luteus GN=RPL13A PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.426e-17 Identity = 48/91 (52.75%), Postives = 59/91 (64.84%), Query Frame = 2 Query: 275 FLRMRMTTLPFHGPFHFRAPAKIFWRSVRGLFPCTTLRVSASLARLWAFEGVLASYDPVLRLVIPVALVVSRLSPGPSFCLLCRLASVVWW 547 FLR RM T P HGP H AP+KIFWR+VRG+ P T R +LARL +EG+ +D RLV+P AL V RL G +CLL +L+S V W Sbjct: 62 FLRKRMNTKPSHGPIHC-APSKIFWRTVRGMIPHKTKRGEHALARLKVYEGIPPPFDKQKRLVVPDALKVLRLQKGHKYCLLGQLSSEVGW 151 The following BLAST results are available for this feature:
BLAST of EY753759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 26
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY753759 ID=EY753759; Name=EY753759; organism=Citrus sinensis; type=EST; length=909bpback to top |