EY753758

Overview
NameEY753758
Unique NameEY753758
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length840
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753758 vs. ExPASy Swiss-Prot
Match: RL13A_MACFA (60S ribosomal protein L13a OS=Macaca fascicularis GN=RPL13A PE=2 SV=3)

HSP 1 Score: 219.164 bits (557), Expect = 2.344e-56
Identity = 105/190 (55.26%), Postives = 137/190 (72.11%), Query Frame = 1
Query:   97 VVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALKVLRLQKGHKYCLLGRLASEVGWNYYDTIRELEKKRKERSQVAYERKKQLNKLRAKAEKVAKEKLGSQLDIL 666
            +V+D R H+LGRLA+IVAK++L G+KVV VRCE I +SG   R K+KY+ FLRKRMNT PS GP HFRAP++IFWRTVRGM+PHKT            ++G+P PYDK KRMV+P ALKV+RL+   K+  LGRLA EVGW Y      LE+KRKE++++ Y +KKQL +LR +AEK  ++K+     +L
Sbjct:    7 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTTTLEEKRKEKAKIHYRKKKQLMRLRKQAEKNVEKKIDKYTQVL 196          
BLAST of EY753758 vs. ExPASy Swiss-Prot
Match: RL13A_RAT (60S ribosomal protein L13a OS=Rattus norvegicus GN=Rpl13a PE=1 SV=2)

HSP 1 Score: 216.853 bits (551), Expect = 1.163e-55
Identity = 105/190 (55.26%), Postives = 137/190 (72.11%), Query Frame = 1
Query:   97 VVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALKVLRLQKGHKYCLLGRLASEVGWNYYDTIRELEKKRKERSQVAYERKKQLNKLRAKAEKVAKEKLGSQLDIL 666
            +V+D R H+LGRLA+IVAK++L G+KVV VRCE I +SG   R K+KY+ FLRKRMNT PS GP HFRAP++IFWRTVRGM+PHKT             +G+P PYDK KRMV+P ALKV+RL+   K+  LGRLA EVGW Y      LE+KRKE++++ Y +KKQL +LR +AEK  ++K+    ++L
Sbjct:    7 LVLDGRSHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVLDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKIHYRKKKQLLRLRKQAEKNVEKKICKFTEVL 196          
BLAST of EY753758 vs. ExPASy Swiss-Prot
Match: RL13A_MOUSE (60S ribosomal protein L13a OS=Mus musculus GN=Rpl13a PE=1 SV=4)

HSP 1 Score: 214.927 bits (546), Expect = 4.420e-55
Identity = 104/190 (54.74%), Postives = 137/190 (72.11%), Query Frame = 1
Query:   97 VVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALKVLRLQKGHKYCLLGRLASEVGWNYYDTIRELEKKRKERSQVAYERKKQLNKLRAKAEKVAKEKLGSQLDIL 666
            +V+D R H+LGRLA+IVAK++L G+KVV VRCE I +SG   R K+KY+ FLRKRMNT PS GP HFRAP++IFWRTVRGM+PHKT             +G+P PYDK KRMV+P ALKV+RL+   K+  LGRLA EVGW Y      LE+KRKE++++ Y +KKQ+ +LR +AEK  ++K+    ++L
Sbjct:    7 LVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVLDGIPPPYDKKKRMVVPAALKVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRKEKAKMHYRKKKQILRLRKQAEKNVEKKICKFTEVL 196          
BLAST of EY753758 vs. ExPASy Swiss-Prot
Match: RL13A_SALTR (60S ribosomal protein L13a (Fragment) OS=Salmo trutta GN=rpl13a PE=2 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.965e-51
Identity = 99/182 (54.40%), Postives = 125/182 (68.68%), Query Frame = 1
Query:  121 MLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALKVLRLQKGHKYCLLGRLASEVGWNYYDTIRELEKKRKERSQVAYERKKQLNKLRAKAEKVAKEKLGSQLDIL 666
            +LGRLA+IVA E+L G KVV VRCE I +SG   R K+KY+ FLRKRMNT PS GP HFRAP++IFWRTVRGM+PHKT            ++GVP PYDK KRMV+P ALK++RL+   K+ LLGRLA EVGW Y      LE+KRKE++++ Y +KK + KL   AEK  +  +     +L
Sbjct:    1 LLGRLAAIVANEVLLGHKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNTNPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVFDGVPPPYDKRKRMVVPAALKIVRLKPTRKFALLGRLAHEVGWKYQAITATLEEKRKEKAKIRYAKKKTVTKLSKLAEKNVESTISKYTAVL 182          
BLAST of EY753758 vs. ExPASy Swiss-Prot
Match: RL13A_SPOFR (60S ribosomal protein L13a OS=Spodoptera frugiperda GN=RpL13A PE=2 SV=1)

HSP 1 Score: 201.83 bits (512), Expect = 3.872e-51
Identity = 101/190 (53.16%), Postives = 130/190 (68.42%), Query Frame = 1
Query:   76 SGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALKVLRLQKGHKYCLLGRLASEVGWNYYDTIRELEKKRKERS--QVAYERK-KQLNKLRAKAEKVAK 636
            +G   K +V+D R H+LGRLA+++AK LL G KVV VRCE+I +SG   R K+K+M FLRKR N  P+ GP HFRAP+KI W+TVRGMIPHKT            Y+G P PYD  +R+V+P AL+V  L+ G KYC +GRL+ EVGW Y D +R+LE KRK +S   +AYE+K K++ K     EKVAK
Sbjct:    2 TGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQINISGNFFRNKLKFMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKSALRRLRAYDGCPPPYDNRRRVVVPAALRVFCLKPGRKYCHVGRLSHEVGWKYRDVVRKLENKRKVKSVKLMAYEKKLKRITK--ESGEKVAK 189          
BLAST of EY753758 vs. ExPASy Swiss-Prot
Match: RL16_NEUCR (60S ribosomal protein L16 OS=Neurospora crassa GN=rpl-16 PE=3 SV=1)

HSP 1 Score: 201.06 bits (510), Expect = 6.605e-51
Identity = 98/181 (54.14%), Postives = 127/181 (70.17%), Query Frame = 1
Query:   97 VVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHG-PIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALKVLRLQKGHKYCLLGRLASEVGWNYYDTIRELEKKRKERSQVAYERKKQLNKLRAKAEKVAK 636
            VV+D + H+LGRLASIVAK+LLNGQK+V VRCE + +SG   R K+KY  +LRK     P+ G P HFRAP++IF++ VRGMIPHKT            +EGVP PYDK K+MV+P AL+VLRLQ G K+C +GRL+SEVGW Y D +  LE++RK +    YERKK   +  ++A+K AK
Sbjct:    8 VVIDGKGHLLGRLASIVAKQLLNGQKIVVVRCEALNISGEFFRAKLKYHSYLRKMTRYNPTRGGPFHFRAPSRIFYKAVRGMIPHKTARGAAALERLKVFEGVPPPYDKKKKMVVPQALRVLRLQPGRKFCTVGRLSSEVGWKYEDVVSRLEERRKAKGAAYYERKKVAARQLSEAKKSAK 188          
BLAST of EY753758 vs. ExPASy Swiss-Prot
Match: RL13A_DROME (60S ribosomal protein L13a OS=Drosophila melanogaster GN=RpL13A PE=1 SV=1)

HSP 1 Score: 200.675 bits (509), Expect = 8.627e-51
Identity = 94/188 (50.00%), Postives = 132/188 (70.21%), Query Frame = 1
Query:   76 SGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALKVLRLQKGHKYCLLGRLASEVGWNYYDTIRELEKKRKERSQVAYERKKQLNKLRAKA-EKVAK 636
            +G+  + VV+D R H+LGRLAS+VAK LL G KV  VRCEE+ +SG   R K+K++ +LRKR N  P+ GP HFRAP++IF++ VRGMIPHKT            ++G+P+PYDK +R+V+P A++VL L+   KYC +GRL+ EVGW+Y D I+ LE+KRK + +V  +  ++L KL  KA E +AK
Sbjct:    2 TGLTNRTVVIDGRGHLLGRLASVVAKYLLQGGKVAVVRCEELNLSGHFYRNKIKFLAYLRKRCNVNPARGPFHFRAPSRIFYKAVRGMIPHKTKRGQAALARLRVFDGIPSPYDKRRRVVVPIAMRVLTLRSDRKYCQVGRLSHEVGWHYQDVIKSLERKRKAKLRVTLKHNRELKKLTVKARENIAK 189          
BLAST of EY753758 vs. ExPASy Swiss-Prot
Match: RL13A_CHOPR (60S ribosomal protein L13a OS=Choristoneura parallela GN=RpL13A PE=2 SV=1)

HSP 1 Score: 197.593 bits (501), Expect = 7.303e-50
Identity = 95/180 (52.78%), Postives = 126/180 (70.00%), Query Frame = 1
Query:   76 SGICAKRVVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALKVLRLQKGHKYCLLGRLASEVGWNYYDTIRELEKKRKERS--QVAYERK-KQLNK 606
            +G   K +V+D R H+LGRLA+++AK LL G KVV VRCE++ +SG   R K+K+M FLRKR N  P+ GP HFRAP+KI W+TVRGMIPHKT            Y+G P PYD  +R+V+P AL+V  L+ G KYC +GRL+ EVGW Y + +R+LE KRK ++  +VAYERK K++ K
Sbjct:    2 TGFSNKAIVIDGRGHLLGRLAAVIAKVLLEGNKVVVVRCEQLNISGNFFRNKLKFMSFLRKRCNVNPARGPFHFRAPSKILWKTVRGMIPHKTERGKDALRRLRSYDGCPPPYDNRRRVVVPAALRVFCLKPGRKYCHVGRLSHEVGWKYREVVRKLEDKRKFKAVHKVAYERKLKKITK 181          
BLAST of EY753758 vs. ExPASy Swiss-Prot
Match: RL16A_SCHPO (60S ribosomal protein L16-A OS=Schizosaccharomyces pombe GN=rpl16a PE=1 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.627e-49
Identity = 97/190 (51.05%), Postives = 129/190 (67.89%), Query Frame = 1
Query:   91 KRVVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALKVLRLQKGHKYCLLGRLASEVGWNYYDTIRELEKKRKERSQVAYERKKQLNKLRAKAEKVAKEKLGSQLD 660
            K VV+DA+ H+LGRLAS+VAK+LL GQKVV VRCEE+ +SG   R K+KY+ +LRK     PS G  HFRAP++IF + VRGM+PHKT             EG+P P+DK KR+V+P AL+VLRL+ G KYC +GRL+SEVGW Y D + +LE++RK +S   Y+ K       AK +K+A  K  S ++
Sbjct:    6 KVVVIDAKGHLLGRLASVVAKQLLGGQKVVVVRCEELNISGHFFRNKLKYLAYLRKACRYNPSRGAFHFRAPSRIFQKAVRGMLPHKTARGQAALEHLQAVEGIPPPFDKQKRVVVPAALRVLRLKPGRKYCTVGRLSSEVGWKYSDIVSKLEERRKVKSAAFYQAK------LAKQKKIASAKAASSVN 189          
BLAST of EY753758 vs. ExPASy Swiss-Prot
Match: RL13A_CAEEL (60S ribosomal protein L13a OS=Caenorhabditis elegans GN=rpl-16 PE=2 SV=1)

HSP 1 Score: 196.438 bits (498), Expect = 1.627e-49
Identity = 95/196 (48.47%), Postives = 129/196 (65.82%), Query Frame = 1
Query:   79 GICAKRVVVDARHHMLGRLASIVAKELLNGQKVVAVRCEEICMSGGLVRQKMKYMRFLRKRMNTKPSHGPIHFRAPAKIFWRTVRGMIPHKTXXXXXXXXXXXXYEGVPAPYDKVKRMVIPDALKVLRLQKGHKYCLLGRLASEVGWNYYDTIRELEKKRKERSQVAYERKKQLNKLRAKAEKVAKEKLGSQLDIL 666
            G+  + +++D ++H+LGRLASIVAK+LL G KVV +R EEI +SG   R K+KYM FLRKR N  P+ G  H+RAP KIFWRTVRGM+PHKT            YEGVPA Y K K +  P A +  RLQ   K+C++GRL+ EVGW + D + +LE KRK +    +E+KK+++KL  +A+K A  K+     I+
Sbjct:    2 GLSNRAIIIDGKNHLLGRLASIVAKKLLQGDKVVVLRAEEIVISGNFHRSKLKYMSFLRKRCNINPARGAFHYRAPGKIFWRTVRGMLPHKTNRGNEALKNLRAYEGVPAKYQKTKSLHAPSASR-FRLQPRRKFCVVGRLSHEVGWQFQDVVAKLEAKRKVKGAAYFEQKKKMDKLAVQAKKNAAPKIAQYQKII 196          
The following BLAST results are available for this feature:
BLAST of EY753758 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 36
Match NameE-valueIdentityDescription
RL13A_MACFA2.344e-5655.2660S ribosomal protein L13a OS=Macaca fascicularis ... [more]
RL13A_RAT1.163e-5555.2660S ribosomal protein L13a OS=Rattus norvegicus GN... [more]
RL13A_MOUSE4.420e-5554.7460S ribosomal protein L13a OS=Mus musculus GN=Rpl1... [more]
RL13A_SALTR2.965e-5154.4060S ribosomal protein L13a (Fragment) OS=Salmo tru... [more]
RL13A_SPOFR3.872e-5153.1660S ribosomal protein L13a OS=Spodoptera frugiperd... [more]
RL16_NEUCR6.605e-5154.1460S ribosomal protein L16 OS=Neurospora crassa GN=... [more]
RL13A_DROME8.627e-5150.0060S ribosomal protein L13a OS=Drosophila melanogas... [more]
RL13A_CHOPR7.303e-5052.7860S ribosomal protein L13a OS=Choristoneura parall... [more]
RL16A_SCHPO1.627e-4951.0560S ribosomal protein L16-A OS=Schizosaccharomyces... [more]
RL13A_CAEEL1.627e-4948.4760S ribosomal protein L13a OS=Caenorhabditis elega... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-006-E11-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753758 ID=EY753758; Name=EY753758; organism=Citrus sinensis; type=EST; length=840bp
GAGAGAGTTAGAGCAGAAGAGGGAGAGAAAAAGCCACAAAATAGAGAGAG
AGGAACCCTAATAATGGTGTCGGGATCGGGAATCTGCGCGAAGCGAGTGG
TGGTGGACGCACGCCACCACATGCTGGGGCGGCTGGCGTCGATCGTGGCC
AAGGAGCTCCTCAACGGACAGAAAGTCGTCGCGGTCCGCTGCGAAGAGAT
TTGCATGTCCGGCGGCCTCGTCCGCCAGAAAATGAAGTACATGCGGTTCC
TTCGCAAGCGCATGAACACCAAGCCTTCTCACGGTCCCATCCACTTCCGC
GCCCCTGCCAAGATCTTCTGGCGCACCGTCCGCGGGATGATACCGCATAA
GACCAAGCGTGGAGCTGCAGCACTTGCTCGATTGAAGGCATATGAAGGGG
TCCCTGCACCTTATGACAAGGTGAAGAGAATGGTTATCCCCGACGCTCTC
AAGGTTTTGAGGCTTCAGAAGGGTCACAAGTACTGCTTGTTAGGTCGCCT
GGCATCTGAGGTTGGATGGAATTATTATGACACCATCAGGGAGCTTGAGA
AGAAGAGAAAGGAGAGGTCACAGGTGGCTTATGAGAGGAAGAAGCAGCTC
AACAAACTTAGGGCTAAGGCTGAGAAAGTTGCAAAAGAGAAACTTGGCTC
GCAATTGGACATCCTTGCTCCTGTCAATATTGATCAGNTAGCTTGGTGAG
AACATTTTGTTGGGCATTGGCTTGAATTNCCTTTGTGTTTCGACTTTGNT
CAGACTTTTANAACTAAGATTTGTACAACTTGATGATATCTTTTTTTTTC
CCACTAAACTGATGGGTGAGATGATTCGTATATTCTAATT
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