EY753757

Overview
NameEY753757
Unique NameEY753757
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length876
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9467 contig Csv1_Contig9467:143..1019. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY753757 vs. ExPASy Swiss-Prot
Match: UBL1_SCHPO (Ubiquitin-like protein 1 OS=Schizosaccharomyces pombe GN=ubl1 PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 5.127e-17
Identity = 40/77 (51.95%), Postives = 57/77 (74.03%), Query Frame = 1 
Query:  247 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGT 477
            M I VKTLTGK I L+++ +D +  +K ++++KEGIPP QQRLI+AGKQ+ D +    Y+++  S LHLVL LRGG+
Sbjct:    1 MLIKVKTLTGKEIELDIDPNDKVSRIKERVEEKEGIPPSQQRLIYAGKQMADDKNAESYHLEGGSVLHLVLALRGGS 77
[Close]
BLAST of EY753757 vs. ExPASy Swiss-Prot
Match: RUB1_YEAST (NEDD8-like protein RUB1 OS=Saccharomyces cerevisiae GN=RUB1 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.649e-15
Identity = 40/76 (52.63%), Postives = 57/76 (75.00%), Query Frame = 1 
Query:  247 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 474
            M + VKTLTGK I++E++ SD + ++K  +++KEGIPP QQRLIF GKQ++D  T+ D ++ +   LHLVL LRGG
Sbjct:    1 MIVKVKTLTGKEISVELKESDLVYHIKELLEEKEGIPPSQQRLIFQGKQIDDKLTVTDAHLVEGMQLHLVLTLRGG 76
[Close]
BLAST of EY753757 vs. ExPASy Swiss-Prot
Match: ANUB1_HUMAN (AN1-type zinc finger and ubiquitin domain-containing protein 1 OS=Homo sapiens GN=ANUBL1 PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 5.491e-11
Identity = 36/77 (46.75%), Postives = 51/77 (66.23%), Query Frame = 1 
Query:  244 SMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 474
            +M++F++TLTG    L V   +T+ +VKAKI+  EGIP  +Q LI+   +LE+   L DYNI +  TL LVL +RGG
Sbjct:   27 TMELFIETLTGTCFELRVSPFETVISVKAKIRRLEGIPICRQHLIWNNMELENDYCLNDYNISEGCTLKLVLAMRGG 103
The following BLAST results are available for this feature:
BLAST of EY753757 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
UBL1_SCHPO5.127e-1751.95Ubiquitin-like protein 1 OS=Schizosaccharomyces po... [more]
RUB1_YEAST1.649e-1552.63NEDD8-like protein RUB1 OS=Saccharomyces cerevisia... [more]
ANUB1_HUMAN5.491e-1146.75AN1-type zinc finger and ubiquitin domain-containi... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-006-E10-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753757 ID=EY753757; Name=EY753757; organism=Citrus sinensis; type=EST; length=876bp
GGGGAGGAACTTAGACTTAGAAAAGGAGAAGATCGTAATTTTACTCTACC
CAGAGTTGAAAATCTTGAAACTCGGCGGCGATTTTGAGTTAAAGAAGAGG
CAGGTTCCAGGGAAAAGATTTGGCTCTGGAGGTGGCACGGCATAGCCTTT
TTAAATAAAGACACTGAGTTTCTTTCTTTTTCTGTCTTCAAAGCTTCACC
TTTTTTTCTCAAAGAAGAAGAGTGGGGGAAAAGAAATCAGAGCAGTATGC
AGATCTTTGTGAAGACTTTGACTGGGAAGACAATTACTCTTGAGGTTGAG
AGCAGTGACACCATCGATAATGTTAAGGCTAAGATTCAGGACAAGGAAGG
CATTCCTCCGGATCAGCAGAGATTGATTTTTGCTGGGAAACAATTGGAAG
ATGGCCGTACTCTTGCTGATTATAACATTCAGAAGGAGTCAACACTTCAC
TTGGTCCTGAGGCTCAGGGGAGGAACTATGATCAAGGTGAAGACACTCAC
TGGCAAAGAAATTGAAATTGATATTGAGCCAACTGATACCATTGAACGAA
TAAAGGAAAGGGTGGAGGAAAAAGAAGGGATTCCTCCAGTGCAGCAAAGG
CTTATTTATGCTGGTAAGCAGCTTGCAGACGACAAGACAGCTCGCGACTA
CACATTGAGGGCGGTTCTGTGCTTCATCTTGTTCTTGCACTGNAGGGCGG
CNGTCTTTAAATGCTTCTTTTCGCATGAAGAGAATTCAGAATTCTACGTT
ATGTAGGCTTTATTTTGCCACGGNACTTGATGAAACTGAATGAGTTTGAA
ACAAAGACATATTCTATTTTTTGGACTAACATTGNNTGTTCTTCTTCTTT
TCGCTATATATTTCCTGGCNGGCTTG
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