EY753755
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY753755 vs. ExPASy Swiss-Prot
Match: DHX16_CAEEL (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4 OS=Caenorhabditis elegans GN=mog-4 PE=2 SV=2) HSP 1 Score: 144.436 bits (363), Expect = 8.642e-34 Identity = 81/199 (40.70%), Postives = 116/199 (58.29%), Query Frame = 2 Query: 65 KPRVNGSMANLPILHSEEKIVETAEQNPVAVVIGETGSGKISLFSQILHRRGVTRSGS-IGXXXXXXXXXXXXXXXXXXELGVRLGEEVGYAIRFEDRTSERTLIKHLTDGALLREILSNPELSPCSVLISDEAHERSLNTDILLGLVKRSANLRASNSKSLTTSATLDGEKASKLLFHRPTLNAPGKLDPVEILHSTA 658 K + + +LP+ + +E +++ V ++ GETGSGK + Q L+ G G IG E+G +LG +VGY+IRFED TSE+T++K++TDG LLRE L+ P+L+ SV++ DEAHER+L+TDIL GLVK A R + K L +SATLD EK S P PG+ PV+I ++ A Sbjct: 354 KMSIEETRKSLPVYAFRDAFIEAVKEHQVLIIEGETGSGKTTQLPQYLYEAGFCEGGKRIGCTQPRRVAAMSVAARVADEVGCKLGTQVGYSIRFEDCTSEKTVLKYMTDGMLLREFLNEPDLASYSVMMIDEAHERTLHTDILFGLVKDIARFR-KDLKLLISSATLDAEKFSSFFDDAPIFRIPGRRFPVDIYYTQA 551
BLAST of EY753755 vs. ExPASy Swiss-Prot
Match: CDC28_SCHPO (Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein cdc28 OS=Schizosaccharomyces pombe GN=cdc28 PE=2 SV=2) HSP 1 Score: 143.665 bits (361), Expect = 9.632e-34 Identity = 81/194 (41.75%), Postives = 115/194 (59.28%), Query Frame = 2 Query: 74 VNGSMANLPILHSEEKIVETAEQNPVAVVIGETGSGKISLFSQILHRRGVTRSGS-IGXXXXXXXXXXXXXXXXXXELGVRLGEEVGYAIRFEDRTSERTLIKHLTDGALLREILSNPELSPCSVLISDEAHERSLNTDILLGLVKRSANLRASNSKSLTTSATLDGEKASKLLFHRPTLNAPGKLDPVEILHS 652 + S +LP+ ++ +++ + V +++ ETGSGK + Q LH G T+ I E+ VRLG+EVGY+IRFE+ TSE+T+IK+LTDG LLRE L+ P+L+ SV+I DEAHER+L+TDIL GLVK A R + K L +SAT+D EK S P PG+ PV+I ++ Sbjct: 411 LESSRKSLPVYQYKDDLLKAINEYQVLLIVAETGSGKTTQLPQFLHEAGYTKGNKKICCTQPRRVAAMSVAARVAKEMDVRLGQEVGYSIRFENATSEKTVIKYLTDGMLLREFLTEPDLASYSVIIIDEAHERTLHTDILFGLVKDIARFR-PDLKVLISSATIDAEKFSAYFDEAPVFYVPGRRYPVDIYYT 603 HSP 2 Score: 21.557 bits (44), Expect = 9.632e-34 Identity = 8/19 (42.11%), Postives = 12/19 (63.16%), Query Frame = 3 Query: 675 LASALQPALDIHAPRPAGD 731 + +A+ L IH +PAGD Sbjct: 611 IQAAITTILQIHTTQPAGD 629
BLAST of EY753755 vs. ExPASy Swiss-Prot
Match: PRP22_YEAST (Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22 OS=Saccharomyces cerevisiae GN=PRP22 PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.925e-33 Identity = 77/200 (38.50%), Postives = 116/200 (58.00%), Query Frame = 2 Query: 53 QKTSKPRVNGSMANLPILHSEEKIVETAEQNPVAVVIGETGSGKISLFSQILHRRGVTRSGSIGXXXXXXXXXXXXXXXXXXELGVRLGEEVGYAIRFEDRTSERTLIKHLTDGALLREILSNPELSPCSVLISDEAHERSLNTDILLGLVKRSANLRASNSKSLTTSATLDGEKASKLLFHRPTLNAPGKLDPVEILHS 652 ++TS P ++ LP+ ++++ N V++GETGSGK + +Q L G + G IG E+G ++G +VGY IRFED T T IK++TDG L RE L +PE+S SV++ DEAHER++ TD+L L+K++A ++ K + TSATL+ K S+ + P +N PGK PVE+L+S Sbjct: 470 KRTSLP-ISAQRQTLPVYAMRSELIQAVRDNQFLVIVGETGSGKTTQITQYLDEEGFSNYGMIGCTQPRRVAAVSVAKRVAEEVGCKVGHDVGYTIRFEDVTGPDTRIKYMTDGMLQREALLDPEMSKYSVIMLDEAHERTVATDVLFALLKKAA-IKRPELKVIVTSATLNSAKFSEYFLNCPIINIPGKTFPVEVLYS 667
BLAST of EY753755 vs. ExPASy Swiss-Prot
Match: PRP22_SCHPO (Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22 OS=Schizosaccharomyces pombe GN=prp22 PE=2 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 5.602e-33 Identity = 80/187 (42.78%), Postives = 111/187 (59.36%), Query Frame = 2 Query: 95 LPILHSEEKIVETAEQNPVAVVIGETGSGKISLFSQILHRRGVTR-SGSIGXXXXXXXXXXXXXXXXXXELGVRLGEEVGYAIRFEDRTSERTLIKHLTDGALLREILSNPELSPCSVLISDEAHERSLNTDILLGLVKRSANLRASNSKSLTTSATLDGEKASKLLFHRPTLNAPGKLDPVEILHS 652 LP+ ++ +E +N + V++GETGSGK + +Q L G T S IG E+G R+GEEVGY IRFED+TS T IK++TDG L RE L +P LS SV+I DEAHER++ TD+L GL+K + L+ + K + TSATLD E+ S + P PG+ PVEI+++ Sbjct: 510 LPVFKLRKQFLEAVSKNQILVLLGETGSGKTTQITQYLAEEGYTSDSKMIGCTQPRRVAAMSVAKRVAEEVGCRVGEEVGYTIRFEDKTSRMTQIKYMTDGMLQRECLVDPLLSKYSVIILDEAHERTVATDVLFGLLKGTV-LKRPDLKLIVTSATLDAERFSSYFYKCPIFTIPGRSYPVEIMYT 695
BLAST of EY753755 vs. ExPASy Swiss-Prot
Match: DHX16_PANTR (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Pan troglodytes GN=DHX16 PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 5.602e-33 Identity = 81/203 (39.90%), Postives = 112/203 (55.17%), Query Frame = 2 Query: 53 QKTSKPRVNGSMANLPILHSEEKIVETAEQNPVAVVIGETGSGKISLFSQILHRRGVTRSG-SIGXXXXXXXXXXXXXXXXXXELGVRLGEEVGYAIRFEDRTSERTLIKHLTDGALLREILSNPELSPCSVLISDEAHERSLNTDILLGLVKRSANLRASNSKSLTTSATLDGEKASKLLFHRPTLNAPGKLDPVEILHSTA 658 Q K + +LP+ E+++ + V ++ GETGSGK + Q L G T G I E+GV+LG EVGY+IRFED TSERT+++++TDG LLRE LS P+L+ SV++ DEAHER+L+TDIL GL+K A R K L SAT+D + S P PG+ PV+I ++ A Sbjct: 388 QAQQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFR-PELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVDIFYTKA 589
BLAST of EY753755 vs. ExPASy Swiss-Prot
Match: DHX16_HUMAN (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 OS=Homo sapiens GN=DHX16 PE=1 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 5.602e-33 Identity = 81/203 (39.90%), Postives = 112/203 (55.17%), Query Frame = 2 Query: 53 QKTSKPRVNGSMANLPILHSEEKIVETAEQNPVAVVIGETGSGKISLFSQILHRRGVTRSG-SIGXXXXXXXXXXXXXXXXXXELGVRLGEEVGYAIRFEDRTSERTLIKHLTDGALLREILSNPELSPCSVLISDEAHERSLNTDILLGLVKRSANLRASNSKSLTTSATLDGEKASKLLFHRPTLNAPGKLDPVEILHSTA 658 Q K + +LP+ E+++ + V ++ GETGSGK + Q L G T G I E+GV+LG EVGY+IRFED TSERT+++++TDG LLRE LS P+L+ SV++ DEAHER+L+TDIL GL+K A R K L SAT+D + S P PG+ PV+I ++ A Sbjct: 385 QAQQKESIQAVRRSLPVFPFREELLAAIANHQVLIIEGETGSGKTTQIPQYLFEEGYTNKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFR-PELKVLVASATMDTARFSTFFDDAPVFRIPGRRFPVDIFYTKA 586
BLAST of EY753755 vs. ExPASy Swiss-Prot
Match: DHX15_DICDI (Putative pre-mRNA-splicing factor ATP-dependent RNA helicase dhx15 OS=Dictyostelium discoideum GN=dhx15 PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.780e-32 Identity = 77/191 (40.31%), Postives = 112/191 (58.64%), Query Frame = 2 Query: 95 LPILHSEEKIVETAEQNPVAVVIGETGSGKISLFSQILHRRGVTRSGS-IGXXXXXXXXXXXXXXXXXXELGVRLGEEVGYAIRFEDRTSERTLIKHLTDGALLREILSNPELSPCSVLISDEAHERSLNTDILLGLVKRSANLRASNSKSLTTSATLDGEKASKLLFHRPTLNAPGKLDPVEILHSTAAS 664 LP+ +E ++ ++N V +++GETGSGK + Q + G+ R G +G E+ LGEEVGY+IRFE+ +S RT +K+LTDG LLRE +S+P L+ V+I DEAHER+L+TDIL GL+K R + K + SATL+ K K + P + PG+L PVEI ++ A+ Sbjct: 77 LPVWKQKEDFIKVIKENQVVILVGETGSGKTTQIPQFVVDAGLIRPGKMVGVTQPRRVAAISVAKRVSEEMDFELGEEVGYSIRFEELSSARTFMKYLTDGMLLRESMSDPTLNKYDVIILDEAHERTLSTDILFGLIKDILK-RRKDLKLIVMSATLEAGKFQKYFENAPLIKVPGRLHPVEIFYTEEAA 266
BLAST of EY753755 vs. ExPASy Swiss-Prot
Match: PRH1_SCHPO (Probable ATP-dependent RNA helicase prh1 OS=Schizosaccharomyces pombe GN=prh1 PE=2 SV=2) HSP 1 Score: 127.487 bits (319), Expect = 1.093e-28 Identity = 76/201 (37.81%), Postives = 109/201 (54.23%), Query Frame = 2 Query: 92 NLPILHSEEKIVETAEQNPVAVVIGETGSGKISLFSQILHRRGVTRSGSIGXXXXXXXXXXXXXXXXXXELGVRLGEEVGYAIRFEDRTSERTLIKHLTDGALLREILSNPELSPCSVLISDEAHERSLNTDILLGLVKRSANLRASNSKSLTTSATLDGEKASKLLFHRPTLNAPGKLDPVEILHSTAASSKLPCVCFAT 694 NLPI + + + + + N V VV+GETGSGK + Q L+ + G + E G RLGE+VGY+IRF+D TS++T IK+LTDG LLRE++++P LS LI DEAHER+L TD+LLG VK+ R + + + SATL+ E+ S+ G+ PV+I ++ C T Sbjct: 95 NLPIWEAHDTLCQQIQDNRVIVVVGETGSGKSTQIPQFLNECPYAQEGCVAITQPRRVAAVNLAKRVAAEQGCRLGEQVGYSIRFDDTTSKKTRIKYLTDGMLLRELINDPILSQYHTLILDEAHERTLMTDMLLGFVKKIIKKRPA-LRVIIMSATLNAERFSEFFDGAEICYISGRQYPVQIHYTYTPEPDYLDACLRT 294
BLAST of EY753755 vs. ExPASy Swiss-Prot
Match: DHX15_ARATH (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase OS=Arabidopsis thaliana GN=At2g47250 PE=2 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.428e-28 Identity = 74/193 (38.34%), Postives = 106/193 (54.92%), Query Frame = 2 Query: 92 NLPILHSEEKIVETAEQNPVAVVIGETGSGKISLFSQILHRRGVT------RSGSIGXXXXXXXXXXXXXXXXXXELGVRLGEEVGYAIRFEDRTSERTLIKHLTDGALLREILSNPELSPCSVLISDEAHERSLNTDILLGLVKRSANLRASNSKSLTTSATLDGEKASKLLFHRPTLNAPGKLDPVEILHS 652 +LP+ ++ + T N +++GETGSGK + Q + V R +G E+ V +GEEVGY+IRFED TS RT++K+LTDG LLRE +++P L V+I DEAHER+L TD+L GL+K R + K + SATL+ EK + P + PG+L PVEI ++ Sbjct: 64 DLPVWLQKDDFLNTLNSNQTLILVGETGSGKTTQIPQFVLDAVVADNSDKGRKWLVGCTQPRRVAAMSVSRRVADEMDVSIGEEVGYSIRFEDCTSSRTMLKYLTDGMLLREAMADPLLERYKVIILDEAHERTLATDVLFGLLKEVLRNR-PDLKLVVMSATLEAEKFQEYFSGAPLMKVPGRLHPVEIFYT 255
BLAST of EY753755 vs. ExPASy Swiss-Prot
Match: DHX15_SCHPO (Probable pre-mRNA-splicing factor ATP-dependent RNA helicase prp43 OS=Schizosaccharomyces pombe GN=prp43 PE=2 SV=1) HSP 1 Score: 126.716 bits (317), Expect = 1.865e-28 Identity = 77/192 (40.10%), Postives = 106/192 (55.21%), Query Frame = 2 Query: 95 LPILHSEEKIVETAEQNPVAVVIGETGSGKIS------LFSQILHRRGVTRSGSIGXXXXXXXXXXXXXXXXXXELGVRLGEEVGYAIRFEDRTSERTLIKHLTDGALLREILSNPELSPCSVLISDEAHERSLNTDILLGLVKRSANLRASNSKSLTTSATLDGEKASKLLFHRPTLNAPGKLDPVEILHS 652 LP+ E+ ++ +N + V +GETGSGK + L+ ++ H I E+ V LGEEVGY IRFED + TL+K++TDG LLRE +++ LS S +I DEAHER+L TDIL+GL+KR A R + K + SATLD +K K F P L PG+ PVEI ++ Sbjct: 75 LPVYQQREEFLKIYHENQIIVFVGETGSGKTTQIPQFVLYDELPHLTNT----QIACTQPRRVAAMSVAKRVADEMDVDLGEEVGYNIRFEDCSGPNTLLKYMTDGMLLREAMTDHMLSRYSCIILDEAHERTLATDILMGLMKRLAT-RRPDLKIIVMSATLDAKKFQKYFFDAPLLAVPGRTYPVEIYYT 261 The following BLAST results are available for this feature:
BLAST of EY753755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >EY753755 ID=EY753755; Name=EY753755; organism=Citrus sinensis; type=EST; length=935bpback to top |