EY753755
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of EY753755 vs. ExPASy Swiss-Prot
Match: DHR1_YEAST (Probable ATP-dependent RNA helicase DHR1 OS=Saccharomyces cerevisiae GN=ECM16 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.208e-21 Identity = 60/155 (38.71%), Postives = 82/155 (52.90%), Query Frame = 2 Query: 95 LPILHSEEKIVETAEQNPVAVVIGETGSGKISLFSQILHRRGVTRS------GSIGXXXXXXXXXXXXXXXXXXELGVRLGEEVGYAIRFEDRTSERTLIKHLTDGALLREILSNPELSPCSVLISDEAHERSLNTDILLGLVKRSANLRASNSK 541 LP+ E KI+E N V ++ GETGSGK + Q L+ G G +G ELG G +VGY IRF+ E T +K +TDG LLRE++ + +L+ S +I DEAHER++NTDIL+G++ R LRA K Sbjct: 391 LPVFGEEHKIMEAIHHNDVVIICGETGSGKTTQVPQFLYEAGFGAEDSPDYPGMVGITQPRRVAAVSMAERVANELGDH-GHKVGYQIRFDSTAKEDTKVKFMTDGVLLREMMHDFKLTKYSSIIIDEAHERNINTDILIGMLSRCVRLRAKLHK 544
BLAST of EY753755 vs. ExPASy Swiss-Prot
Match: DHX35_HUMAN (Probable ATP-dependent RNA helicase DHX35 OS=Homo sapiens GN=DHX35 PE=1 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 4.919e-21 Identity = 70/197 (35.53%), Postives = 96/197 (48.73%), Query Frame = 2 Query: 95 LPILHSEEKIVETAEQNPVAVVIGETGSGKISLFSQILHRRGVTRSGSI-GXXXXXXXXXXXXXXXXXXELGVRLGEEVGYAIRFEDRTSE-RTLIKHLTDGALLREILSNPELSPCSVLISDEAHERSLNTDILLGLVKRSANLRASNSKSLTTSATLDGEKASKLLFHRPT----------LNAPGKLDPVEILH 649 LP+ I+ E V++GETG GK + Q L G T G + G E G LG EVGY IRF+D T + T IK LTDG L+RE++ +P L+ SV++ DEAHER+L TDI +GL+K+ R + + + SATLD +K T L G+ PV+I + Sbjct: 54 LPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKR-GDLRLIVASATLDADKFRDFFNQNETSDPARDTCVILTVEGRTFPVDIFY 249
BLAST of EY753755 vs. ExPASy Swiss-Prot
Match: DHX35_PONAB (Probable ATP-dependent RNA helicase DHX35 OS=Pongo abelii GN=DHX35 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 6.424e-21 Identity = 70/197 (35.53%), Postives = 96/197 (48.73%), Query Frame = 2 Query: 95 LPILHSEEKIVETAEQNPVAVVIGETGSGKISLFSQILHRRGVTRSGSI-GXXXXXXXXXXXXXXXXXXELGVRLGEEVGYAIRFEDRTSE-RTLIKHLTDGALLREILSNPELSPCSVLISDEAHERSLNTDILLGLVKRSANLRASNSKSLTTSATLDGEKASKLLFHRPT----------LNAPGKLDPVEILH 649 LP+ I+ E V++GETG GK + Q L G T G + G E G LG EVGY IRF+D T + T IK LTDG L+RE++ +P L+ SV++ DEAHER+L TDI +GL+K+ R + + + SATLD +K T L G+ PV+I + Sbjct: 54 LPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGRVVGVTQPRRVAAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLLTKYSVIMLDEAHERTLYTDIAIGLLKKIQKKR-GDLRLIVASATLDADKFRDFFNQNETSDPARDTCVILTVGGRTFPVDIFY 249
BLAST of EY753755 vs. ExPASy Swiss-Prot
Match: RHA2_CAEEL (Putative ATP-dependent RNA helicase rha-2 OS=Caenorhabditis elegans GN=rha-2 PE=2 SV=2) HSP 1 Score: 97.8265 bits (242), Expect = 9.277e-20 Identity = 63/169 (37.28%), Postives = 88/169 (52.07%), Query Frame = 2 Query: 74 VNGSMANLPILHSEEKIVETAEQNPVAVVIGETGSGKISLFSQILHRRGVTRSGSIGXXXXXXXXXXXXXXXXXXELGVRLG--EEVGYAIRFEDRTSERTLIKHLTDGALLREILSNPELSPCSVLISDEAHERSLNTDILLGLVKRSANLRASNSKSL---TTSATL 565 + S A LPI E +IVE +N V VV GETGSGK + Q L+ G G + +GV L +EV Y IR+E SE T I +TDG L++E+ + L SV++ DEAHERS+ +D+L+G++ R LR+ ++ L SATL Sbjct: 229 IQKSRAELPIFAEEMRIVEAINENLVTVVCGETGSGKTTQIPQFLYEAGYASEGEL---IGITEPRRVAAIAMAQRVGVELAKPDEVSYQIRYEGTRSETTNILFMTDGVLMKEMEQDVMLKKYSVILIDEAHERSMYSDVLIGMLSRIVPLRSKTARPLRLVIMSATL 394
BLAST of EY753755 vs. ExPASy Swiss-Prot
Match: YK16_SCHPO (Putative ATP-dependent RNA helicase PB1A10.06c OS=Schizosaccharomyces pombe GN=SPAPB1A10.06c PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 2.067e-19 Identity = 72/195 (36.92%), Postives = 93/195 (47.69%), Query Frame = 2 Query: 68 PRVNGSMANLPILHSEEKIVETAEQNPVAVVIGETGSGKISLFSQILHRRGVT-----RSGSIGXXXXXXXXXXXXXXXXXXELGVRLGEEVGYAIRFEDRTSERTLIKHLTDGALLREILSNPELSPCSVLISDEAHERSLNTDILLGLVKRSANLRASNSKS---------LTTSATL--DGEKASKLLFHRP 604 P + S LPI+ E++I+E N V ++ G TGSGK + Q L G + G I EL +V Y IRF+ + T IK +TDG LLRE+ S+ L+ S +I DEAHERS+NTDILLGL+ R LR SKS + SATL +KLLF P Sbjct: 389 PEIQESRLALPIVAEEQRIMEQIFANDVVIICGATGSGKTTQLPQFLFEAGFSSPESENPGMIAITQPRRVAAVSIAKRVSEEL-TGFSSKVSYQIRFDSTINPDTAIKFMTDGILLRELSSDFLLTAYSAVIVDEAHERSVNTDILLGLLSRIVRLRREMSKSDQKVKPLKLIIMSATLRVTDFSENKLLFSVP 582
BLAST of EY753755 vs. ExPASy Swiss-Prot
Match: DHX34_MOUSE (Probable ATP-dependent RNA helicase DHX34 OS=Mus musculus GN=Dhx34 PE=2 SV=2) HSP 1 Score: 95.1301 bits (235), Expect = 6.013e-19 Identity = 64/187 (34.22%), Postives = 91/187 (48.66%), Query Frame = 2 Query: 89 ANLPILHSEEKIVETAEQNPVAVVIGETGSGKISLFSQILHRRGVTRSGSIGXXXXXXXXXXXXXXXXXXELGVRLGEEVGYAIRFEDRTSERTLIKHLTDGALLREILSNPELSPCSVLISDEAHERSLNTDILLGLVKRSANLRASNSKSLTTSATLDGEKASKLLFHRPTLNAPGKLDPVEILH 649 A LPI +I++T +++ V VV G+TG GK + Q L G + + E + G +VGY IRFE S T I LT G LLR+I P L VLI DE HER L+ D LLG+++R R + K + SAT++ S H P + PG+L P+ +++ Sbjct: 162 AALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH---VACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQR-PDLKVILMSATINISLFSSYFSHAPVVQVPGRLFPITVVY 344
BLAST of EY753755 vs. ExPASy Swiss-Prot
Match: DHX34_HUMAN (Probable ATP-dependent RNA helicase DHX34 OS=Homo sapiens GN=DHX34 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.648e-18 Identity = 63/185 (34.05%), Postives = 89/185 (48.11%), Query Frame = 2 Query: 89 ANLPILHSEEKIVETAEQNPVAVVIGETGSGKISLFSQILHRRGVTRSGSIGXXXXXXXXXXXXXXXXXXELGVRLGEEVGYAIRFEDRTSERTLIKHLTDGALLREILSNPELSPCSVLISDEAHERSLNTDILLGLVKRSANLRASNSKSLTTSATLDGEKASKLLFHRPTLNAPGKLDPVEI 643 A LPI +I++T +++ V VV G+TG GK + Q L G + + E + G +VGY IRFE S T I LT G LLR+I P L VLI DE HER L+ D LLG+++R R + K + SAT++ S + P + PG+L P+ + Sbjct: 160 AALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQVPQYLLAAGFSH---VACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFESTRSAATKIVFLTVGLLLRQIQREPSLPQYEVLIVDEVHERHLHNDFLLGVLQRLLPTR-PDLKVILMSATINISLFSSYFSNAPVVQVPGRLFPITV 340
BLAST of EY753755 vs. ExPASy Swiss-Prot
Match: DHX29_MOUSE (ATP-dependent RNA helicase Dhx29 OS=Mus musculus GN=Dhx29 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 6.648e-18 Identity = 67/195 (34.36%), Postives = 92/195 (47.18%), Query Frame = 2 Query: 95 LPILHSEEKIVETAEQNPVAVVIGETGSGKIS-----LFSQILHRRGVTRSGSIGXXXXXXXXXXXXXXXXXXELGVRLGEE-----VGYAIRFEDRTSERTLIKHLTDGALLREILSNPELSPCSVLISDEAHERSLNTDILLGLVKRSANLRASNSKSLTTSATLDGEKASKLLFHRPTLNAPGKLDPVEILH 649 LP+ + IVET +++ V VV GETGSGK + L +L R +I ELG G GY IR E R SE T + + T G LLR++ + L+ S +I DE HERS+ +D LL ++K R S+ + SAT+D +K S H P L G+ PVE+ H Sbjct: 571 LPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLDECGARKCNIVCTQPRRISAVSLATRVCEELGCESGPGGRNSLCGYQIRMESRASESTRLLYCTTGVLLRKLQEDGLLADVSHVIVDEVHERSVQSDFLLVILKEILQKR-SDLHLILMSATVDSDKFSTYFTHCPILRISGRSYPVEVFH 764
BLAST of EY753755 vs. ExPASy Swiss-Prot
Match: DHX29_HUMAN (ATP-dependent RNA helicase DHX29 OS=Homo sapiens GN=DHX29 PE=1 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 1.481e-17 Identity = 71/210 (33.81%), Postives = 95/210 (45.24%), Query Frame = 2 Query: 50 WQKTSKPRVNGSMANLPILHSEEKIVETAEQNPVAVVIGETGSGKIS-----LFSQILHRRGVTRSGSIGXXXXXXXXXXXXXXXXXXELGVRLGEE-----VGYAIRFEDRTSERTLIKHLTDGALLREILSNPELSPCSVLISDEAHERSLNTDILLGLVKRSANLRASNSKSLTTSATLDGEKASKLLFHRPTLNAPGKLDPVEILH 649 +QK K R LP+ + IVET +++ V VV GETGSGK + L +L +I ELG G GY IR E R E T + + T G LLR++ + LS S +I DE HERS+ +D LL ++K R S+ + SAT+D EK S H P L G+ PVE+ H Sbjct: 562 YQKLLKER-----QQLPVFKHRDSIVETLKRHRVVVVAGETGSGKSTQVPHFLLEDLLLNEWEASKCNIVCTQPRRISAVSLANRVCDELGCENGPGGRNSLCGYQIRMESRACESTRLLYCTTGVLLRKLQEDGLLSNVSHVIVDEVHERSVQSDFLLIILKEILQKR-SDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFH 765
BLAST of EY753755 vs. ExPASy Swiss-Prot
Match: DHX29_XENLA (ATP-dependent RNA helicase DHX29 OS=Xenopus laevis GN=dhx29 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 1.254e-16 Identity = 66/206 (32.04%), Postives = 94/206 (45.63%), Query Frame = 2 Query: 71 RVNGSMANLPILHSEEKIVETAEQNPVAVVIGETGSGKISLFSQILHRRGVTRSGSIGXXXXXXXXXXXXXXXXXXELGVRLGEEVG-------------YAIRFEDRTSERTLIKHLTDGALLREILSNPELSPCSVLISDEAHERSLNTDILLGLVKRSANLRASNSKSLTTSATLDGEKASKLLFHRPTLNAPGKLDPVEILH 649 R+ LP+ I+ET +++ V VV GETGSGK + Q L + GS G L R+ EE+G Y IR E RT E T + + T G LLR++ + L S +I DE HER++ +D LL ++ R + S+ + SAT+D EK S H P + G+ PVE+ H Sbjct: 558 RLLNDREQLPVFARGNFILETLKRHRVIVVAGETGSGKSTQVPQFLLEDLLFNGGSPGKCNIVCTQPRRISAM---SLATRVCEELGCDSGPGGKNSLCGYQIRMESRTGEATRLLYCTTGILLRKLQEDSMLKNISHIIVDEVHERTVQSDFLL-IILREILHKRSDLHLVLMSATVDCEKFSSYFTHCPIIRISGRTFPVEVFH 759 The following BLAST results are available for this feature:
BLAST of EY753755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 66
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Sequences
The
following sequences are available for this feature:
EST sequence >EY753755 ID=EY753755; Name=EY753755; organism=Citrus sinensis; type=EST; length=935bpback to top |