EY753753

Overview
NameEY753753
Unique NameEY753753
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig13126 contig Csv1_Contig13126:1..894. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY753753 vs. ExPASy Swiss-Prot
Match: MYB46_ARATH (Transcription factor MYB46 OS=Arabidopsis thaliana GN=MYB46 PE=2 SV=1)

HSP 1 Score: 159.073 bits (401), Expect = 3.177e-38
Identity = 72/108 (66.67%), Postives = 86/108 (79.63%), Query Frame = 3
Query:  153 LKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSEYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKM 476
            +KKG W+ EED KL+ ++L+NGQ CW  V K AGL RCGKSCRLRW NYLRPDLKRG  S  EE ++I  H+ LGNRWS+IA+ LPGRTDNEIKN WN+ IKK+L+KM
Sbjct:   18 MKKGLWSPEEDSKLMQYMLSNGQGCWSDVAKNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEDLIIRFHSILGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLKKM 125          
BLAST of EY753753 vs. ExPASy Swiss-Prot
Match: RAX3_ARATH (Transcription factor RAX3 OS=Arabidopsis thaliana GN=RAX3 PE=2 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 1.022e-36
Identity = 75/148 (50.68%), Postives = 99/148 (66.89%), Query Frame = 3
Query:  120 MGRQPCCDKVGLKKGPWTAEEDKKLINFILTNGQCC-WRAVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSEYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMGIDPLTHKPLSTTDDQQPQVKINQQEQE 560
            MGR PCCDK  +KKGPW+ EED KL ++I  +G    W A+P+  GL RCGKSCRLRW NYLRP++K G  SE EE ++  L+  +G+RWS IA+ LPGRTDN+IKN+WNT +KKKL       L     +  + Q+  V + +Q Q+
Sbjct:    1 MGRAPCCDKANVKKGPWSPEEDAKLKSYIENSGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEENIICSLYLTIGSRWSIIAAQLPGRTDNDIKNYWNTRLKKKLINKQRKELQE---ACMEQQEMMVMMKRQHQQ 145          
BLAST of EY753753 vs. ExPASy Swiss-Prot
Match: RAX1_ARATH (Transcription factor RAX1 OS=Arabidopsis thaliana GN=RAX1 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.973e-36
Identity = 70/123 (56.91%), Postives = 89/123 (72.36%), Query Frame = 3
Query:  120 MGRQPCCDKVGLKKGPWTAEEDKKLINFILTNGQCC-WRAVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSEYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMGID 485
            MGR PCCDK  +K+GPW+ EED KL ++I   G    W + P  AGL RCGKSCRLRW NYLRP++K G  SE E++++  L A +G+RWS IA+HLPGRTDN+IKN+WNT ++KKL     D
Sbjct:    1 MGRAPCCDKTKVKRGPWSPEEDSKLRDYIEKYGNGGNWISFPLKAGLRRCGKSCRLRWLNYLRPNIKHGDFSEEEDRIIFSLFAAIGSRWSIIAAHLPGRTDNDIKNYWNTKLRKKLLSSSSD 123          
BLAST of EY753753 vs. ExPASy Swiss-Prot
Match: RAX2_ARATH (Transcription factor RAX2 OS=Arabidopsis thaliana GN=RAX2 PE=1 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 5.072e-36
Identity = 72/134 (53.73%), Postives = 94/134 (70.15%), Query Frame = 3
Query:  120 MGRQPCCDKVGLKKGPWTAEEDKKLINFILTNGQCC-WRAVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSEYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKL-RKMGIDPLTHKPLSTT 515
            MGR PCCDK  +K+GPW+ EED KL ++I   G    W A+P  AGL RCGKSCRLRW NYLRP+++ G  +E E+ ++  L A +G+RWS IA+HL GRTDN+IKN+WNT +KKKL   M   P  H  ++T+
Sbjct:    1 MGRAPCCDKANVKRGPWSPEEDAKLKDYIEKQGTGGNWIALPHKAGLRRCGKSCRLRWLNYLRPNIRHGDFTEEEDNIIYSLFASIGSRWSVIAAHLQGRTDNDIKNYWNTKLKKKLIATMAPPPHHHLAIATS 134          
BLAST of EY753753 vs. ExPASy Swiss-Prot
Match: MYBC_MAIZE (Anthocyanin regulatory C1 protein OS=Zea mays GN=C1 PE=2 SV=1)

HSP 1 Score: 150.599 bits (379), Expect = 1.130e-35
Identity = 66/115 (57.39%), Postives = 87/115 (75.65%), Query Frame = 3
Query:  120 MGRQPCCDKVGLKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSEYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKK 464
            MGR+ CC K G+K+G WT++ED  L  ++  +G+  WR VP+ AGL RCGKSCRLRW NYLRP+++RG +S  EE ++I LH  LGNRWS IA  LPGRTDNEIKN+WN+ + ++
Sbjct:    1 MGRRACCAKEGVKRGAWTSKEDDALAAYVKAHGEGKWREVPQKAGLRRCGKSCRLRWLNYLRPNIRRGNISYDEEDLIIRLHRLLGNRWSLIAGRLPGRTDNEIKNYWNSTLGRR 115          
BLAST of EY753753 vs. ExPASy Swiss-Prot
Match: GAM1_ORYSJ (Transcription factor GAMYB OS=Oryza sativa subsp. japonica GN=GAM1 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.927e-35
Identity = 67/126 (53.17%), Postives = 95/126 (75.40%), Query Frame = 3
Query:  153 LKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSEYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRK-MGIDPLTHKPLSTTDDQQ 527
            LKKGPWT+ ED  L++++  +G+  W AV K  GL RCGKSCRLRW N+LRP+LK+G  +  EE+++I LH+++GN+W+++A+HLPGRTDNEIKN+WNT IK+  R  + I P +    S+ +DQQ
Sbjct:   40 LKKGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGAFTAEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWNTRIKRCQRAGLPIYPTSVCNQSSNEDQQ 165          
BLAST of EY753753 vs. ExPASy Swiss-Prot
Match: GAM1_ORYSI (Transcription factor GAMYB OS=Oryza sativa subsp. indica GN=GAM1 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.927e-35
Identity = 67/126 (53.17%), Postives = 95/126 (75.40%), Query Frame = 3
Query:  153 LKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSEYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRK-MGIDPLTHKPLSTTDDQQ 527
            LKKGPWT+ ED  L++++  +G+  W AV K  GL RCGKSCRLRW N+LRP+LK+G  +  EE+++I LH+++GN+W+++A+HLPGRTDNEIKN+WNT IK+  R  + I P +    S+ +DQQ
Sbjct:   40 LKKGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGAFTAEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWNTRIKRCQRAGLPIYPTSVCNQSSNEDQQ 165          
BLAST of EY753753 vs. ExPASy Swiss-Prot
Match: MYB40_ANTMA (Myb-related protein 340 OS=Antirrhinum majus GN=MYB340 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 5.608e-35
Identity = 68/120 (56.67%), Postives = 91/120 (75.83%), Query Frame = 3
Query:  120 MGRQPC-CDKVGLKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSEYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWN-THIKKKLRK 473
            M ++PC    V ++KGPWT EED  LINFI  +G+  W  + + AGL R GKSCRLRW NYLRPD++RG ++  E+ ++++LHA+ GNRWSKIA HLPGRTDNEIKN+WN T I+K +++
Sbjct:    1 MDKKPCNSHDVEVRKGPWTMEEDLILINFISNHGEGVWNTIARSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRWSKIAKHLPGRTDNEIKNYWNRTRIQKHIKQ 120          
BLAST of EY753753 vs. ExPASy Swiss-Prot
Match: MYB05_ANTMA (Myb-related protein 305 OS=Antirrhinum majus GN=MYB305 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 4.747e-34
Identity = 65/119 (54.62%), Postives = 90/119 (75.63%), Query Frame = 3
Query:  120 MGRQPCCDK-VGLKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSEYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRK 473
            M ++PC  + V ++KGPWT EED  LIN+I  +G+  W ++ + AGL R GKSCRLRW NYLRPD++RG ++  E+ ++++LHA+ GNRWSKIA  LPGRTDNEIKN+W T I+K + +
Sbjct:    1 MDKKPCNSQDVEVRKGPWTMEEDLILINYIANHGEGVWNSLARSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLLIMELHAKWGNRWSKIAKTLPGRTDNEIKNYWRTRIQKHMEQ 119          
BLAST of EY753753 vs. ExPASy Swiss-Prot
Match: MYB21_ARATH (Transcription factor MYB21 OS=Arabidopsis thaliana GN=MYB21 PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 8.098e-34
Identity = 63/110 (57.27%), Postives = 84/110 (76.36%), Query Frame = 3
Query:  153 LKKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSEYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMGI 482
            ++KGPWT EED  LIN+I  +G   W ++ K AGL R GKSCRLRW NYLRPD++RG ++  E+ ++++LHA+ GNRWSKIA HLPGRTDNEIKN W T I+K +++  +
Sbjct:   20 VRKGPWTMEEDLILINYIANHGDGVWNSLAKSAGLKRTGKSCRLRWLNYLRPDVRRGNITPEEQLIIMELHAKWGNRWSKIAKHLPGRTDNEIKNFWRTRIQKYIKQSDV 129          
The following BLAST results are available for this feature:
BLAST of EY753753 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
MYB46_ARATH3.177e-3866.67Transcription factor MYB46 OS=Arabidopsis thaliana... [more]
RAX3_ARATH1.022e-3650.68Transcription factor RAX3 OS=Arabidopsis thaliana ... [more]
RAX1_ARATH2.973e-3656.91Transcription factor RAX1 OS=Arabidopsis thaliana ... [more]
RAX2_ARATH5.072e-3653.73Transcription factor RAX2 OS=Arabidopsis thaliana ... [more]
MYBC_MAIZE1.130e-3557.39Anthocyanin regulatory C1 protein OS=Zea mays GN=C... [more]
GAM1_ORYSJ1.927e-3553.17Transcription factor GAMYB OS=Oryza sativa subsp. ... [more]
GAM1_ORYSI1.927e-3553.17Transcription factor GAMYB OS=Oryza sativa subsp. ... [more]
MYB40_ANTMA5.608e-3556.67Myb-related protein 340 OS=Antirrhinum majus GN=MY... [more]
MYB05_ANTMA4.747e-3454.62Myb-related protein 305 OS=Antirrhinum majus GN=MY... [more]
MYB21_ARATH8.098e-3457.27Transcription factor MYB21 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-006-E06-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753753 ID=EY753753; Name=EY753753; organism=Citrus sinensis; type=EST; length=894bp
GCTGTTGCTGCTGCATATATACATTTCAAAGACTCTCAAAGCTCTTCCTC
TCCTGATCATTTTCGCTATACATATAGATTGTATCTAGAGTTGATAGTTT
TTCAATTGATCAAATTAAGATGGGGAGGCAGCCATGCTGTGACAAAGTTG
GTCTGAAGAAAGGGCCATGGACAGCTGAAGAAGACAAGAAGCTCATCAAC
TTCATTCTCACCAATGGCCAATGCTGCTGGAGAGCTGTTCCCAAGCTTGC
AGGTTTGTTAAGGTGTGGAAAAAGCTGCCGGCTTAGGTGGACAAATTATC
TTAGGCCTGACTTAAAAAGAGGTCTTTTATCAGAATATGAAGAAAAAATG
GTCATTGATCTGCACGCTCAACTCGGCAACAGATGGTCCAAGATTGCTTC
TCATCTTCCAGGAAGAACTGATAATGAGATCAAGAACCACTGGAACACAC
ACATCAAAAAGAAGCTAAGAAAAATGGGAATTGATCCTCTTACTCACAAG
CCACTTTCAACTACTGATGATCAACAACCCCAAGTGAAGATTAATCAACA
AGAACAAGAACCATTGATGATCAATGATGAATCAATAATAGACCGAAACA
ATAAGGAGCCTGAGACATCAGTACAGTCATCAATCACTGAAGTCAATAAA
GAGGAGGACAAAGTGATGAGCATGACAAGTTCTCCACTATTCGATCATAT
TGATGCTGCTACAATGGAGATTATGAACAAACATTTTTGCACTGATGATG
TTCCTTTGATCGAGCACATGAGATTTTAGTCCCATGCTCAACCTCTAGTA
TTTATCATCCTCATGNTCATATTCTTCAGAAATTCATCCNNATAGTGCTG
GAAGAATGGCAGTTCACGATTTTGAGTGGGCTGCTGCTTCTATA
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