EY753753

Overview
NameEY753753
Unique NameEY753753
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753753 vs. ExPASy Swiss-Prot
Match: MYB1_NEUCR (Myb-like DNA-binding protein myb-1 OS=Neurospora crassa GN=rca-1 PE=3 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 2.074e-13
Identity = 37/97 (38.14%), Postives = 56/97 (57.73%), Query Frame = 3
Query:  156 KKGPWTAEEDKKLINFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSEYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIKNHWN 446
            ++GPW+A ED++LI  +   G   W  V ++ G  R  K CR RW   L+P L  G +++ E  +++      G RW+ IA  L GR+DN +KN+WN
Sbjct:    8 RRGPWSAGEDQRLIKLVKDLGPGNWVNVARILGT-RTPKQCRERWHQNLKPGLNHGPMTQEEAAIIVREVDLKGPRWADIARKLQGRSDNAVKNYWN 103          
BLAST of EY753753 vs. ExPASy Swiss-Prot
Match: MYB1_PHYPA (Myb-related protein Pp1 (Fragment) OS=Physcomitrella patens GN=PP1 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.755e-12
Identity = 46/140 (32.86%), Postives = 69/140 (49.29%), Query Frame = 3
Query:  372 LGNRWSKIASHLPGRTDNEIKNHWNTHIKKKLRKMGIDPLTHKPLSTTD--------DQQPQVKIN----------QQEQEPLMINDESIIDRNNKEPETSVQSSITEVNKEEDKVMSMTSSPLFDHIDAATMEIMNKHF 737
            LGNRWS IA  +P RTDNEIKN+WNTH+KK+L +MGIDP+THK  +  +          +P V  N          + E E  +    S+    +   +TS++   + ++ + D    + SS       A   E +  +F
Sbjct:    1 LGNRWSAIA--IPRRTDNEIKNYWNTHLKKRLMQMGIDPVTHKSTAAEELVHYSIIPGLRPVVSTNLTHMSQWDSARAEAEARLSRQSSLTSPASDLAQTSLEHQKSNLSTKNDVNNQVASSNFMSSWKAQVTETLRPNF 138          
BLAST of EY753753 vs. ExPASy Swiss-Prot
Match: MYBB_DICDI (Myb-like protein B OS=Dictyostelium discoideum GN=mybB PE=2 SV=2)

HSP 1 Score: 70.0922 bits (170), Expect = 1.941e-11
Identity = 59/252 (23.41%), Postives = 101/252 (40.08%), Query Frame = 3
Query:  150 GLKKGP--WTAEEDKKLINFILTNGQCCWRAVPKLAGLLRCGKSCRLRWTNYLRPDLKRGLLSEYEEKMVIDLHAQLGNRWSKIASHLPGRTDNEIK-----------NHWN------THIKKKLRKMGIDPLTHKPLSTTDDQQPQVKINQQEQEP----LMINDESIIDRNNKEPETSVQSSITEVNKEEDKVMSMTSSPLFDHIDAATMEIMNKHFCTDDVPLIEHMRF*SHAQPLVFIILMXIFFRNS 836
            G++  P  WT EE + LI  +  NG   W+ +    G  + G  C   W   L P++K+G   E EE+++  L  + G  W  +A  +  RTD + +             WN         K KL     + ++ + +S    +    KI +   E       +N  ++ + NN    +   SS     +++  +++ TSSPL   I  +T  I+N       V  I+  +      P  FI     F+R +
Sbjct:  434 GIRSPPNKWTKEESQNLIKLVTENGDKQWKKIATKLGGGKTGAQCAQHWKRVLSPEIKKGSWDEAEEELLFQLVDKHGQSWKNVAIEIKTRTDIQCRYQYFKAIMSRQTEWNQLEDDILTKKIKLMTQNNEKISFQQVSKHLARAKTTKIPRTALECKSRWSQLNSTNVNNNNNNNNNSITTSSSNTNQQQQSTMVTPTSSPLSSPIPMST-PIINNSMPQQQVQQIQQQQISIQPYPQSFIQETQGFYRGN 684          
The following BLAST results are available for this feature:
BLAST of EY753753 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 73
Match NameE-valueIdentityDescription
MYB1_NEUCR2.074e-1338.14Myb-like DNA-binding protein myb-1 OS=Neurospora c... [more]
MYB1_PHYPA1.755e-1232.86Myb-related protein Pp1 (Fragment) OS=Physcomitrel... [more]
MYBB_DICDI1.941e-1123.41Myb-like protein B OS=Dictyostelium discoideum GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-006-E06-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753753 ID=EY753753; Name=EY753753; organism=Citrus sinensis; type=EST; length=894bp
GCTGTTGCTGCTGCATATATACATTTCAAAGACTCTCAAAGCTCTTCCTC
TCCTGATCATTTTCGCTATACATATAGATTGTATCTAGAGTTGATAGTTT
TTCAATTGATCAAATTAAGATGGGGAGGCAGCCATGCTGTGACAAAGTTG
GTCTGAAGAAAGGGCCATGGACAGCTGAAGAAGACAAGAAGCTCATCAAC
TTCATTCTCACCAATGGCCAATGCTGCTGGAGAGCTGTTCCCAAGCTTGC
AGGTTTGTTAAGGTGTGGAAAAAGCTGCCGGCTTAGGTGGACAAATTATC
TTAGGCCTGACTTAAAAAGAGGTCTTTTATCAGAATATGAAGAAAAAATG
GTCATTGATCTGCACGCTCAACTCGGCAACAGATGGTCCAAGATTGCTTC
TCATCTTCCAGGAAGAACTGATAATGAGATCAAGAACCACTGGAACACAC
ACATCAAAAAGAAGCTAAGAAAAATGGGAATTGATCCTCTTACTCACAAG
CCACTTTCAACTACTGATGATCAACAACCCCAAGTGAAGATTAATCAACA
AGAACAAGAACCATTGATGATCAATGATGAATCAATAATAGACCGAAACA
ATAAGGAGCCTGAGACATCAGTACAGTCATCAATCACTGAAGTCAATAAA
GAGGAGGACAAAGTGATGAGCATGACAAGTTCTCCACTATTCGATCATAT
TGATGCTGCTACAATGGAGATTATGAACAAACATTTTTGCACTGATGATG
TTCCTTTGATCGAGCACATGAGATTTTAGTCCCATGCTCAACCTCTAGTA
TTTATCATCCTCATGNTCATATTCTTCAGAAATTCATCCNNATAGTGCTG
GAAGAATGGCAGTTCACGATTTTGAGTGGGCTGCTGCTTCTATA
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