EY753716

Overview
NameEY753716
Unique NameEY753716
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY753716_ssr380 microsatellite EY753716_ssr380:380..391. BLAST: Citrus ESTs to Prunus persica proteins V1
Homology
BLAST of EY753716 vs. ExPASy Swiss-Prot
Match: IF5A5_SOLTU (Eukaryotic translation initiation factor 5A-5 OS=Solanum tuberosum GN=EIF5A5 PE=2 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 6.135e-54
Identity = 77/83 (92.77%), Postives = 80/83 (96.39%), Query Frame = 2
Query:   80 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDV 328
            MSDEEHHFESKADAGASKT+PQQAGTIRK+G+IVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIF GKKLEDIVPSSHNCDV
Sbjct:    1 MSDEEHHFESKADAGASKTYPQQAGTIRKSGHIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTGKKLEDIVPSSHNCDV 83          

HSP 2 Score: 68.1662 bits (165), Expect = 6.135e-54
Identity = 40/80 (50.00%), Postives = 45/80 (56.25%), Query Frame = 1
Query:  433 VPHVTRTDYQLIDISEDGFVCXXXXXXXXXXXXXXXXMRLVNFCYSNKLQVSLLTENGHTKDDLRLPTDENLLSRLVD*F 672
            VPHV RTDYQLIDISEDGFV                               SLLTENG+TKDDLRLPTD+ LL+++ D F
Sbjct:   83 VPHVNRTDYQLIDISEDGFV-------------------------------SLLTENGNTKDDLRLPTDDTLLAQVKDGF 131          
BLAST of EY753716 vs. ExPASy Swiss-Prot
Match: IF5A2_MEDSA (Eukaryotic translation initiation factor 5A-2 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 166.777 bits (421), Expect = 7.998e-54
Identity = 78/83 (93.98%), Postives = 79/83 (95.18%), Query Frame = 2
Query:   80 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDV 328
            MSDEEHHFE  ADAGASKT+PQQAGTIRKNGYIVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIFNGKKLEDIVPSSHNCDV
Sbjct:    1 MSDEEHHFEPAADAGASKTYPQQAGTIRKNGYIVIKSRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDV 83          

HSP 2 Score: 65.855 bits (159), Expect = 7.998e-54
Identity = 38/80 (47.50%), Postives = 45/80 (56.25%), Query Frame = 1
Query:  433 VPHVTRTDYQLIDISEDGFVCXXXXXXXXXXXXXXXXMRLVNFCYSNKLQVSLLTENGHTKDDLRLPTDENLLSRLVD*F 672
            VPHV RTDYQLIDISEDGFV                               SLLT+NG TKDDL+LPTD++LL+++ D F
Sbjct:   83 VPHVNRTDYQLIDISEDGFV-------------------------------SLLTDNGSTKDDLKLPTDDSLLTQIKDGF 131          
BLAST of EY753716 vs. ExPASy Swiss-Prot
Match: IF5A1_SOLLC (Eukaryotic translation initiation factor 5A-1 OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 7.998e-54
Identity = 77/83 (92.77%), Postives = 79/83 (95.18%), Query Frame = 2
Query:   80 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDV 328
            MSDEEHHFESKADAGASKT+PQQAGTIRK G+IVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIF GKKLEDIVPSSHNCDV
Sbjct:    1 MSDEEHHFESKADAGASKTYPQQAGTIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTGKKLEDIVPSSHNCDV 83          

HSP 2 Score: 68.1662 bits (165), Expect = 7.998e-54
Identity = 40/80 (50.00%), Postives = 45/80 (56.25%), Query Frame = 1
Query:  433 VPHVTRTDYQLIDISEDGFVCXXXXXXXXXXXXXXXXMRLVNFCYSNKLQVSLLTENGHTKDDLRLPTDENLLSRLVD*F 672
            VPHV RTDYQLIDISEDGFV                               SLLTENG+TKDDLRLPTD+ LL+++ D F
Sbjct:   83 VPHVNRTDYQLIDISEDGFV-------------------------------SLLTENGNTKDDLRLPTDDTLLAQVKDGF 131          
BLAST of EY753716 vs. ExPASy Swiss-Prot
Match: IF5A_SENVE (Eukaryotic translation initiation factor 5A OS=Senecio vernalis GN=EIFSV1 PE=2 SV=1)

HSP 1 Score: 160.614 bits (405), Expect = 3.274e-52
Identity = 76/83 (91.57%), Postives = 78/83 (93.98%), Query Frame = 2
Query:   80 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDV 328
            MSDEEH FESKADAGASKT+PQQAGTIRK G+IVIK R CKVVEVSTSKTGKHGHAKCHFV IDIFNGKKLEDIVPSSHNCDV
Sbjct:    1 MSDEEHQFESKADAGASKTYPQQAGTIRKGGHIVIKNRACKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDV 83          

HSP 2 Score: 66.6254 bits (161), Expect = 3.274e-52
Identity = 39/80 (48.75%), Postives = 45/80 (56.25%), Query Frame = 1
Query:  433 VPHVTRTDYQLIDISEDGFVCXXXXXXXXXXXXXXXXMRLVNFCYSNKLQVSLLTENGHTKDDLRLPTDENLLSRLVD*F 672
            VPHV RTDYQLIDISEDGFV                               SLLTENG+TKDDL+LPTD+ LL+++ D F
Sbjct:   83 VPHVNRTDYQLIDISEDGFV-------------------------------SLLTENGNTKDDLKLPTDDALLTQIKDGF 131          
BLAST of EY753716 vs. ExPASy Swiss-Prot
Match: IF5A_MAIZE (Eukaryotic translation initiation factor 5A OS=Zea mays GN=TIF5A PE=1 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 1.232e-51
Identity = 77/84 (91.67%), Postives = 81/84 (96.43%), Query Frame = 2
Query:   80 MSD-EEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDV 328
            MSD EEHHFESKADAGASKT+PQQAGT+RKNG+IVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIFNGKKLEDIVPSSHNCD+
Sbjct:    1 MSDSEEHHFESKADAGASKTYPQQAGTVRKNGFIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDI 84          

HSP 2 Score: 61.2326 bits (147), Expect = 1.232e-51
Identity = 35/80 (43.75%), Postives = 44/80 (55.00%), Query Frame = 1
Query:  433 VPHVTRTDYQLIDISEDGFVCXXXXXXXXXXXXXXXXMRLVNFCYSNKLQVSLLTENGHTKDDLRLPTDENLLSRLVD*F 672
            +PHV RT+YQLIDISEDGFV                               SLLT +G+TKDDLRLPTDE L++++ + F
Sbjct:   84 IPHVNRTEYQLIDISEDGFV-------------------------------SLLTSDGNTKDDLRLPTDETLVAQIKEGF 132          
BLAST of EY753716 vs. ExPASy Swiss-Prot
Match: IF5A1_MEDSA (Eukaryotic translation initiation factor 5A-1 OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 2.093e-51
Identity = 75/84 (89.29%), Postives = 78/84 (92.86%), Query Frame = 2
Query:   80 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDI-VPSSHNCDV 328
            MSDEEH FESKADAGASKT+PQQAGTIRKNGYIVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIF  KKLE++ VPSSHNCDV
Sbjct:    1 MSDEEHQFESKADAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTSKKLEEVYVPSSHNCDV 84          

HSP 2 Score: 67.781 bits (164), Expect = 2.093e-51
Identity = 39/80 (48.75%), Postives = 46/80 (57.50%), Query Frame = 1
Query:  433 VPHVTRTDYQLIDISEDGFVCXXXXXXXXXXXXXXXXMRLVNFCYSNKLQVSLLTENGHTKDDLRLPTDENLLSRLVD*F 672
            VPHV RTDYQLIDISEDGFV                               SLLTENG+TKDDL+LPTD++LL+++ D F
Sbjct:   84 VPHVNRTDYQLIDISEDGFV-------------------------------SLLTENGNTKDDLKLPTDDSLLTQIKDGF 132          
BLAST of EY753716 vs. ExPASy Swiss-Prot
Match: IF5A1_ARATH (Eukaryotic translation initiation factor 5A-1 OS=Arabidopsis thaliana GN=At1g13950 PE=2 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 1.455e-49
Identity = 76/83 (91.57%), Postives = 78/83 (93.98%), Query Frame = 2
Query:   80 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDV 328
            MSDEEHHFES +DAGASKT+PQQAGTIRKNGYIVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIF  KKLEDIVPSSHNCDV
Sbjct:    1 MSDEEHHFES-SDAGASKTYPQQAGTIRKNGYIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTSKKLEDIVPSSHNCDV 82          

HSP 2 Score: 59.6918 bits (143), Expect = 1.455e-49
Identity = 34/76 (44.74%), Postives = 40/76 (52.63%), Query Frame = 1
Query:  433 VPHVTRTDYQLIDISEDGFVCXXXXXXXXXXXXXXXXMRLVNFCYSNKLQVSLLTENGHTKDDLRLPTDENLLSRL 660
            VPHV RTDYQLIDISEDG+                               VSLLT+NG TKDDL+LP D+ LL ++
Sbjct:   82 VPHVNRTDYQLIDISEDGY-------------------------------VSLLTDNGSTKDDLKLPNDDTLLQQI 126          
BLAST of EY753716 vs. ExPASy Swiss-Prot
Match: IF5A_DIACA (Eukaryotic translation initiation factor 5A OS=Dianthus caryophyllus PE=2 SV=1)

HSP 1 Score: 162.925 bits (411), Expect = 1.896e-49
Identity = 75/83 (90.36%), Postives = 80/83 (96.39%), Query Frame = 2
Query:   80 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDV 328
            MSD++HHFES ADAGASKT+PQQAGTIRK+G+IVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIFNGKKLEDIVPSSHNCDV
Sbjct:    1 MSDDDHHFESSADAGASKTYPQQAGTIRKSGHIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFNGKKLEDIVPSSHNCDV 83          

HSP 2 Score: 55.0694 bits (131), Expect = 1.896e-49
Identity = 32/80 (40.00%), Postives = 41/80 (51.25%), Query Frame = 1
Query:  433 VPHVTRTDYQLIDISEDGFVCXXXXXXXXXXXXXXXXMRLVNFCYSNKLQVSLLTENGHTKDDLRLPTDENLLSRLVD*F 672
            VPHV R DYQL+DI+EDGF                               VSLLT++G TKDDL+LP DE L+ ++ + F
Sbjct:   83 VPHVNRVDYQLLDITEDGF-------------------------------VSLLTDSGDTKDDLKLPADEALVKQMKEGF 131          
BLAST of EY753716 vs. ExPASy Swiss-Prot
Match: IF5A3_ARATH (Eukaryotic translation initiation factor 5A-3 OS=Arabidopsis thaliana GN=At1g69410 PE=2 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 5.473e-49
Identity = 73/83 (87.95%), Postives = 77/83 (92.77%), Query Frame = 2
Query:   80 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDV 328
            MSD+EHHFES +DAGASKT+PQQAG IRK G+IVIKGRPCKVVEVSTSKTGKHGHAKCHFV IDIF  KKLEDIVPSSHNCDV
Sbjct:    1 MSDDEHHFES-SDAGASKTYPQQAGNIRKGGHIVIKGRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTSKKLEDIVPSSHNCDV 82          

HSP 2 Score: 62.7734 bits (151), Expect = 5.473e-49
Identity = 38/80 (47.50%), Postives = 43/80 (53.75%), Query Frame = 1
Query:  433 VPHVTRTDYQLIDISEDGFVCXXXXXXXXXXXXXXXXMRLVNFCYSNKLQVSLLTENGHTKDDLRLPTDENLLSRLVD*F 672
            VPHV R DYQLIDISEDGFV                               SLLT+NG TKDDL+LPTDE LL++L + F
Sbjct:   82 VPHVNRVDYQLIDISEDGFV-------------------------------SLLTDNGSTKDDLKLPTDEALLTQLKNGF 130          
BLAST of EY753716 vs. ExPASy Swiss-Prot
Match: IF5A2_ARATH (Eukaryotic translation initiation factor 5A-2 OS=Arabidopsis thaliana GN=At1g26630 PE=1 SV=1)

HSP 1 Score: 145.591 bits (366), Expect = 1.680e-44
Identity = 68/83 (81.93%), Postives = 75/83 (90.36%), Query Frame = 2
Query:   80 MSDEEHHFESKADAGASKTFPQQAGTIRKNGYIVIKGRPCKVVEVSTSKTGKHGHAKCHFVGIDIFNGKKLEDIVPSSHNCDV 328
            MSD+EHHFE+ +++GASKT+PQ AG IRK G+IVIK RPCKVVEVSTSKTGKHGHAKCHFV IDIF  KKLEDIVPSSHNCDV
Sbjct:    1 MSDDEHHFEA-SESGASKTYPQSAGNIRKGGHIVIKNRPCKVVEVSTSKTGKHGHAKCHFVAIDIFTAKKLEDIVPSSHNCDV 82          

HSP 2 Score: 55.8398 bits (133), Expect = 1.680e-44
Identity = 32/76 (42.11%), Postives = 40/76 (52.63%), Query Frame = 1
Query:  433 VPHVTRTDYQLIDISEDGFVCXXXXXXXXXXXXXXXXMRLVNFCYSNKLQVSLLTENGHTKDDLRLPTDENLLSRL 660
            VPHV R DYQLIDI+EDGF                               VSLLT++G TKDDL+LPTD+ L +++
Sbjct:   82 VPHVNRVDYQLIDITEDGF-------------------------------VSLLTDSGGTKDDLKLPTDDGLTAQM 126          
The following BLAST results are available for this feature:
BLAST of EY753716 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 45
Match NameE-valueIdentityDescription
IF5A5_SOLTU6.135e-5492.77Eukaryotic translation initiation factor 5A-5 OS=S... [more]
IF5A2_MEDSA7.998e-5493.98Eukaryotic translation initiation factor 5A-2 OS=M... [more]
IF5A1_SOLLC7.998e-5492.77Eukaryotic translation initiation factor 5A-1 OS=S... [more]
IF5A_SENVE3.274e-5291.57Eukaryotic translation initiation factor 5A OS=Sen... [more]
IF5A_MAIZE1.232e-5191.67Eukaryotic translation initiation factor 5A OS=Zea... [more]
IF5A1_MEDSA2.093e-5189.29Eukaryotic translation initiation factor 5A-1 OS=M... [more]
IF5A1_ARATH1.455e-4991.57Eukaryotic translation initiation factor 5A-1 OS=A... [more]
IF5A_DIACA1.896e-4990.36Eukaryotic translation initiation factor 5A OS=Dia... [more]
IF5A3_ARATH5.473e-4987.95Eukaryotic translation initiation factor 5A-3 OS=A... [more]
IF5A2_ARATH1.680e-4481.93Eukaryotic translation initiation factor 5A-2 OS=A... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-006-A11-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753716 ID=EY753716; Name=EY753716; organism=Citrus sinensis; type=EST; length=893bp
CCACGCGTCCGGGTATAGTTCGATTCTACCAAAATTTGGTTGTCGAAGCT
CTAATTGTGAATCGCAGGAACCAGACGATATGTCGGACGAAGAGCACCAC
TTTGAGTCGAAGGCCGACGCCGGCGCCTCCAAGACATTTCCTCAGCAGGC
CGGAACCATCCGCAAAAACGGTTATATCGTCATCAAAGGTCGTCCTTGCA
AGGTTGTTGAGGTTTCAACTTCCAAGACTGGAAAGCACGGTCATGCTAAG
TGTCACTTTGTAGGAATTGACATCTTCAATGGCAAGAAGCTTGAGGATAT
TGTTCCCTCTTCCCACAACTGTGATGTATTGATTTATGCTTCTTTGAGTG
CATTTAACTTTATAATTTTTTACTTCTTTTAAATAAATAAAAAAATTCGC
GTGAGGTTAATGTGTTTTATTTCACTTTATAGGTTCCTCATGTCACTCGC
ACTGACTACCAGCTGATTGATATCTCTGAGGATGGATTTGTATGTTCTTA
CTTTGTTTTGTCATGTTCATTTTACTTGTCTTTTTTGCTGTAAATGCGAT
TAGTTAATTTCTGTTACTCTAATAAATTGCAGGTTAGCCTGCTGACTGAG
AATGGGCATACCAAGGATGACCTGAGACTTCCAACTGATGAAAATCTGCT
TTCCAGGTTAGTTGACTGATTTCCATTTTTACAAGGGACCCCATGTTGCA
GTGTGTTATAATTTTANTGTCGTTATGGTTTGGAGGTATGAAAAAAAAAT
GGGATGCTGGGTTCTATTACTGNNCCATCTGTCAAATTAAAGGTGAATCT
TGTTTGATCATAATGGCAACTAACAAAATTTTCATGGTTGAATTTGAAGT
TTAAAACCTGGGATCGNCGGTTTTGATTTTGCCATTGAACTTT
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