EY753702

Overview
NameEY753702
Unique NameEY753702
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length883
Libraries
Library NameType
Sweet orange leaf, field plant Acdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY753702 vs. ExPASy Swiss-Prot
Match: IMA2_XENLA (Importin subunit alpha-2 OS=Xenopus laevis GN=kpna2 PE=1 SV=2)

HSP 1 Score: 123.635 bits (309), Expect = 2.573e-31
Identity = 70/167 (41.92%), Postives = 105/167 (62.87%), Query Frame = 3
Query:  141 SKADSRRNKYK-VAVDADEGRRRREDNMVEIRKNKREESLQKKRREGLQNQQPLANDVNAPGTAKKLE-NLPVMVAGVWSNDSGVQYECTTQFRKLLSIERSPPIEEVIRSGVVPRFVEFLLREDYPQLQFEAAWALTNIASGTSEHTKVVIDHGAVPIFVKLLILP 635
            ++AD R  K+K    D  E RRRR +  VE+RK K++E + K+R      +  L+ + NA  + +  + +L  +V G+ S D+  +   T   RK+LS ER+PP+ ++I +G++P+ VEFL   +   LQFEAAWALTNIASGTS+ TK V+D GA+P F+ L+  P
Sbjct:    5 NEADERMRKFKNKGKDTAELRRRRVEVSVELRKAKKDEQILKRRNVCFPEELILSPEKNAMQSIQVPQLSLEEIVQGMNSGDNENELRSTQAARKMLSKERNPPLNDIIEAGLIPKLVEFLSYHNNSTLQFEAAWALTNIASGTSDQTKSVVDGGAIPAFISLISSP 171          

HSP 2 Score: 32.3426 bits (72), Expect = 2.573e-31
Identity = 19/56 (33.93%), Postives = 27/56 (48.21%), Query Frame = 2
Query:  629 SPSDDVREQAWWALGNLAGDFPRCPELGFNPGGLVPFVGQLDGQPKLSLS*KGPWT 796
            SP   + EQA WALGN+AGD P   +   +   + P +  ++ Q  L       WT
Sbjct:  170 SPHLHISEQAVWALGNIAGDGPLYRDALISCNVIPPLLTLVNPQTPLGYLRNITWT 225          
BLAST of EY753702 vs. ExPASy Swiss-Prot
Match: IMA3_CAEEL (Importin subunit alpha-3 OS=Caenorhabditis elegans GN=ima-3 PE=1 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 1.036e-29
Identity = 68/160 (42.50%), Postives = 97/160 (60.62%), Query Frame = 3
Query:  147 ADSRRNKYKVAVDADEGRRRREDNMVEIRKNKREESLQKKRREGLQNQQPLANDVNAPGTAKKLENLPVMVAGVWSNDSGVQYECTTQFRKLLSIERSPPIEEVIRSGVVPRFVEFLLREDYPQLQFEAAWALTNIASGTSEHTKVVIDHGAVPIFVKLL 626
            + +R+  YK       G+ +R + +V IRK+KREE++ K+R    Q +         PG       L + VA   S+D   Q     Q RK+LS +R+PPI+++I SG++P  V+ L   D P LQFEAAWALTNIASGTSE T+ V++ GAVP+F++LL
Sbjct:    2 SSNRQAYYKNNAKEQIGKEKRNEEVVSIRKDKREEAISKRRNINTQIEDDSETSTTPPGPFDA-NLLRLTVAAAQSSDPAEQLTAVQQARKMLSTDRNPPIDDLIGSGILPVLVQCLSSTD-PNLQFEAAWALTNIASGTSEQTQAVVNAGAVPLFLQLL 159          

HSP 2 Score: 29.261 bits (64), Expect = 1.036e-29
Identity = 15/28 (53.57%), Postives = 18/28 (64.29%), Query Frame = 2
Query:  641 DVREQAWWALGNLAGDFPR----CPELG 712
            +V EQ+ WALGN+ GD P     C ELG
Sbjct:  165 NVCEQSVWALGNIIGDGPHFRDYCLELG 192          
BLAST of EY753702 vs. ExPASy Swiss-Prot
Match: IMA_DROME (Importin subunit alpha OS=Drosophila melanogaster GN=Pen PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 2.639e-27
Identity = 68/165 (41.21%), Postives = 101/165 (61.21%), Query Frame = 3
Query:  141 SKADS--RRNKYKV-AVDADEGRRRREDNMVEIRKNKREESLQKKRREGLQNQQPLANDVNAPGTAKKLENLPVMVAGVWSNDSGVQYECTTQFRKLLSIERSPPIEEVIRSGVVPRFVEFLLREDYPQLQFEAAWALTNIASGTSEHTKVVIDHGAVPIFVKLL 626
            SKADS  R+  YK  +++  + R RR +  +E+RK+K+E+ + K+R    ++      ++N  G +    ++  +VA + S D   Q+      RK+LS ER+PPI+ +I  G+VP  + FL   +   LQFEAAWALTNIASGTS+ T+ VI+H AVP FV LL
Sbjct:    2 SKADSNSRQGSYKANSINTQDSRMRRHEVTIELRKSKKEDQMFKRRNINDEDLTSPLKELN--GQSPVQLSVDEIVAAMNSEDQERQFLGMQSARKMLSRERNPPIDLMIGHGIVPICIRFLQNTNNSMLQFEAAWALTNIASGTSDQTRCVIEHNAVPHFVALL 164          

HSP 2 Score: 29.6462 bits (65), Expect = 2.639e-27
Identity = 13/20 (65.00%), Postives = 16/20 (80.00%), Query Frame = 2
Query:  629 SPSDDVREQAWWALGNLAGD 688
            S S ++ EQA WALGN+AGD
Sbjct:  166 SKSMNLAEQAVWALGNIAGD 185          
BLAST of EY753702 vs. ExPASy Swiss-Prot
Match: IMA8_HUMAN (Importin subunit alpha-8 OS=Homo sapiens GN=KPNA7 PE=2 SV=1)

HSP 1 Score: 110.538 bits (275), Expect = 1.284e-26
Identity = 67/163 (41.10%), Postives = 98/163 (60.12%), Query Frame = 3
Query:  150 DSRRNKYKV-AVDADEGRRRREDNMVEIRKNKREESLQKKRREGLQNQQPLANDVNAPGTAKKLE---NLPVMVAGVWSNDSGVQYECTTQFRKLLSIERSPPIEEVIRSGVVPRFVEFLLREDYPQLQFEAAWALTNIASGTSEHTKVVIDHGAVPIFVKLL 626
            + RR K+K    D    R++R    +E+RK K++E   K+R     N      D  +  TAK +     L  ++ GV S+D  + ++ T   RK+LS E++PP++ VI +G++PR VEFL    YP LQFEAAWALTNIASGTSE T+ V++ GA+   ++LL
Sbjct:    8 EERRRKFKYRGKDVSLRRQQRMAVSLELRKAKKDEQTLKRR-----NITSFCPDTPSEKTAKGVAVSLTLGEIIKGVNSSDPVLCFQATQTARKMLSQEKNPPLKLVIEAGLIPRMVEFLKSSLYPCLQFEAAWALTNIASGTSEQTRAVVEGGAIQPLIELL 165          

HSP 2 Score: 29.6462 bits (65), Expect = 1.284e-26
Identity = 13/17 (76.47%), Postives = 14/17 (82.35%), Query Frame = 2
Query:  644 VREQAWWALGNLAGDFP 694
            V EQA WALGN+AGD P
Sbjct:  172 VCEQAVWALGNIAGDGP 188          
BLAST of EY753702 vs. ExPASy Swiss-Prot
Match: IMA2_CAEEL (Importin subunit alpha-2 OS=Caenorhabditis elegans GN=ima-2 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.530e-15
Identity = 55/167 (32.93%), Postives = 89/167 (53.29%), Query Frame = 3
Query:  156 RRNKYKVAVDADEGRRRREDNMVEIRKNKREESLQKKRR-----EGLQNQQPLAND--VNAPGTAKKLEN--LPVMVAGVWSNDSGVQYECTTQFRKLLSIERSPPIEEVIRSGVVPRFVEFLLREDYPQLQFEAAWALTNIASGTSEHTKVVIDHGAVPIFVKLLI 629
            R  +YK     +E RRRR +  VEIRK K  + + K+R      EG  ++  L     ++   ++ +L N  +  +++   S D  V+  C    RK LS  ++PPI+EVI  G++   V+ L  E+  ++Q+EAAWALTNI SG++E T   ++ G     + L +
Sbjct:   21 RLQQYKNLTKHEELRRRRTECSVEIRKQKGADMMMKRRNIVDVDEGGNSESELEEPEKISHQQSSTRLSNDEIRAILSNNPSEDDMVR--CFESLRKSLSKTKNPPIDEVIHCGLLQALVQALSVEN-ERVQYEAAWALTNIVSGSTEQTIAAVEAGVTIPLIHLSV 184          

HSP 2 Score: 26.5646 bits (57), Expect = 1.530e-15
Identity = 11/22 (50.00%), Postives = 14/22 (63.64%), Query Frame = 2
Query:  623 SYSPSDDVREQAWWALGNLAGD 688
            S   S  + EQA WA+ N+AGD
Sbjct:  183 SVHQSAQISEQALWAVANIAGD 204          
The following BLAST results are available for this feature:
BLAST of EY753702 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 35
Match NameE-valueIdentityDescription
IMA2_XENLA2.573e-3141.92Importin subunit alpha-2 OS=Xenopus laevis GN=kpna... [more]
IMA3_CAEEL1.036e-2942.50Importin subunit alpha-3 OS=Caenorhabditis elegans... [more]
IMA_DROME2.639e-2741.21Importin subunit alpha OS=Drosophila melanogaster ... [more]
IMA8_HUMAN1.284e-2641.10Importin subunit alpha-8 OS=Homo sapiens GN=KPNA7 ... [more]
IMA2_CAEEL1.530e-1532.93Importin subunit alpha-2 OS=Caenorhabditis elegans... [more]

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Properties
Property NameValue
Genbank descriptionCS12-C1-001-005-H08-CT.F Sweet orange leaf, field plant A Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY753702 ID=EY753702; Name=EY753702; organism=Citrus sinensis; type=EST; length=883bp
CCACGCGTCCGCTTTCTTGAAACTGCCTCCAGGCCCCAACAATCTCCCTT
CCTCTCTCTCGCTCTCTCTATATATAAATATATTTGAAATTTAATTAGGG
TTTTAACTTCAACCGCGAAACGATGTCGTTGAGGCCGAACTCGAAAGCCG
ACAGTCGACGCAACAAATACAAGGTAGCAGTCGACGCCGATGAAGGTCGC
CGGAGGAGAGAGGATAACATGGTGGAGATCCGAAAGAACAAAAGAGAAGA
AAGCTTGCAGAAGAAGCGACGTGAAGGTCTGCAAAACCAGCAACCGCTCG
CTAATGATGTTAACGCTCCTGGTACAGCGAAGAAGTTGGAAAATCTACCT
GTGATGGTAGCCGGTGTTTGGTCTAATGACAGTGGTGTGCAGTATGAGTG
TACCACTCAGTTTCGAAAATTGCTGTCCATCGAACGCAGCCCACCAATTG
AAGAAGTTATACGATCTGGTGTTGTTCCTCGCTTTGTTGAGTTTCTTCTG
AGGGAGGATTATCCGCAACTTCAGTTTGAAGCGGCTTGGGCTCTTACGAA
CATTGCTTCTGGGACTTCCGAGCATACTAAGGTGGTAATTGATCATGGGG
CTGTTCCAATATTTGTGAAACTTCTTATTCTCCCAGCGACGATGTTCGCG
AGCAGGCTTGGTGGGCATTGGGAAATTTGGCTGGTGACTTTCCCAGATGC
CCNGAACTTGGTTTTAACCCAGGAGGTTTGGTCCCTTTTGTTGGCCAATT
GGATGGCCAACCAAAGCTTTCCCTGTCTTAAAAGGGTCCCTGGACTCTTT
TAAACTTTGGGGGGGGAAACCCTCCCCCCTTTTTGCCAGTTTACCCTGGC
CTTTCTGGTTTGGCCTTTTTTTTCTTCAACGGT
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